Pre_GI Gene

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Host: NC_004663 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_004663:3801071 Bacteroides thetaiotaomicron VPI-5482, complete genome

Host Lineage: Bacteroides thetaiotaomicron; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This is the type strain for this organism and was isolated from the feces of a healthy adult. Common gastrointestinal bacterium. This group of microbes constitute the most abundant members of the intestinal microflora of mammals. Typically they are symbionts, but they can become opportunistic pathogens in the peritoneal (intra-abdominal) cavity. Breakdown of complex plant polysaccharides such as cellulose and hemicellulose and host-derived polysaccharides such as mucopolysaccharides is aided by the many enzymes these organisms produce. Bacteroides thetaiotaomicron is one of the two major Bacteroidesspecies found in the intestine. This organism has been used in studies on gut microflora composition and succession.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
38010713801646576RNA polymerase ECF-type sigma factorQuickGO ontologyBLASTP
38018413802749909putative anti-sigma factorQuickGO ontologyBLASTP
380280738061843378putative outer membrane protein probably involved in nutrient bindingQuickGO ontologyBLASTP
380619738081311935hypothetical proteinBLASTP
38081693809065897putative chitobiaseQuickGO ontologyBLASTP
380907538119812907hypothetical proteinBLASTP
381216838149842817TonB-dependent receptorQuickGO ontologyBLASTP
38151523816084933acid phosphataseQuickGO ontologyBLASTP
381624138180911851putative mechano-sensitive ion channelQuickGO ontologyBLASTP
38182183819204987putative NaCa2 exchanger protein cation antiporterQuickGO ontologyBLASTP
381928638208271542hypothetical proteinBLASTP
382097238223241353hypothetical proteinBLASTP