Pre_GI: BLASTP Hits

Some Help

Query: NC_009513:870837:873129 Lactobacillus reuteri F275, complete genome

Start: 873129, End: 873464, Length: 336

Host Lineage: Lactobacillus reuteri; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain (JCM 1112, F275) is the type strain for the species. It is a human isolate, which is unable to colonize the intestinal tract of mice. Normal gut bacterium. They are commonly found in the oral, vaginal, and intestinal tracts of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained. These cultures produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also used as a starter molecule for complex organic molecule syntheses. Lactobacillus reuteri is a member of the normal microbial community of the gut in humans and animals. This organism produces antibiotic compounds, such as reutericin and reuterin, which have inhibitory effects on pathogenic microorganisms.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010610:755000:763466763466763780315Lactobacillus fermentum IFO 3956, complete genomehypothetical protein1e-24111
NC_010999:1245239:125530312553031255641339Lactobacillus casei, complete genomeRepressor (Gp132 protein)1e-21101
NC_015428:1483768:150354015035401503917378Lactobacillus buchneri NRRL B-30929 chromosome, complete genomehelix-turn-helix domain-containing protein4e-1786.7
NC_013198:1095591:110846011084601108798339Lactobacillus rhamnosus GG, complete genomeprophage protein, DNA-binding protein2e-1580.9
NC_015975:752927:770469770469770795327Lactobacillus ruminis ATCC 27782 chromosome, complete genometranscriptional regulator, phage associated6e-1579.3
NC_010321:35855:358553585536244390Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeXRE family transcriptional regulator5e-1476.3
NC_014964:35862:358623586236251390Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completehelix-turn-helix domain-containing protein5e-1476.3
NC_015573:2040500:204189420418942042295402Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehelix-turn-helix domain-containing protein9e-1475.5
NC_014964:2272413:229248922924892292878390Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completehelix-turn-helix domain-containing protein1e-1375.1
NC_010516:2328288:234697823469782347427450Clostridium botulinum B1 str. Okra, complete genometranscriptional regulator1e-1374.7
NC_011837:3272752:329170232917023292304603Clostridium kluyveri NBRC 12016, complete genomehypothetical protein6e-1372.8
NC_009706:3341250:336020033602003360802603Clostridium kluyveri DSM 555 chromosome, complete genometranscriptional regulator6e-1372.8
NC_014538:2158131:218091821809182181331414Thermoanaerobacter sp. X513 chromosome, complete genomehelix-turn-helix domain-containing protein1e-1168.9
NC_006322:1415863:142614914261491426517369Bacillus licheniformis ATCC 14580, complete genomeYqaE2e-1167.8
NC_006270:1415001:142528614252861425654369Bacillus licheniformis ATCC 14580, complete genomeprobable transcriptional regulator (phage-related)2e-1167.8
NC_016894:3988180:400563340056334006028396Acetobacterium woodii DSM 1030 chromosome, complete genomeputative phage repressor2e-1167.8
NC_008525:1013979:102745410274541027801348Pediococcus pentosaceus ATCC 25745, complete genomeTranscriptional regulator, xre family4e-1167
NC_012658:1810640:181110518111051811530426Clostridium botulinum Ba4 str. 657 chromosome, complete genomeimmunity repressor protein4e-1166.6
NC_003212:1248000:124920512492051249633429Listeria innocua Clip11262, complete genomehypothetical protein1e-1065.1
NC_013171:896802:898431898431899051621Anaerococcus prevotii DSM 20548, complete genometranscriptional regulator, XRE family1e-1065.1
NC_017179:1683199:168719916871991687747549Clostridium difficile BI1, complete genomephage regulatory protein2e-1064.3
NC_015601:627217:628845628845629261417Erysipelothrix rhusiopathiae str. Fujisawa, complete genomeXRE family transcriptional regulator3e-1063.9
NC_009495:2479465:252016025201602520594435Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeDNA-binding phage protein3e-1063.5
NC_009617:1897887:190150219015021901873372Clostridium beijerinckii NCIMB 8052 chromosome, complete genomehelix-turn-helix domain-containing protein8e-1062.4
NC_016935:7512884:752068375206837520877195Paenibacillus mucilaginosus 3016 chromosome, complete genomeXRE family transcriptional regulator1e-0962
NC_015690:7422911:743071274307127430906195Paenibacillus mucilaginosus KNP414 chromosome, complete genomeXRE family transcriptional regulator1e-0962
NC_016935:1636278:164723516472351647612378Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein2e-0961.2
NC_017208:694500:696523696523696867345Bacillus thuringiensis serovar chinensis CT-43 chromosome, completetranscriptional regulator2e-0961.2
NC_013205:526281:535213535213535704492Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,transcriptional regulator, XRE family2e-0961.2
NC_012034:2555447:257988525798852580199315Anaerocellum thermophilum DSM 6725, complete genometranscriptional regulator, XRE family3e-0960.5
NC_002662:30922:436894368944075387Lactococcus lactis subsp. lactis Il1403, complete genomeprophage ps1 protein 153e-0960.5
NC_015519:1081539:108566910856691086064396Tepidanaerobacter sp. Re1 chromosome, complete genomehelix-turn-helix domain-containing protein3e-0960.5
NC_004722:1804788:180713218071321807470339Bacillus cereus ATCC 14579, complete genomeTranscriptional regulator4e-0960.1
NC_009253:3017280:302629030262903026709420Desulfotomaculum reducens MI-1 chromosome, complete genomeXRE family transcriptional regulator4e-0960.1
NC_009332:1050353:106756510675651067915351Streptococcus pyogenes str. Manfredo chromosome, complete genomephage DNA-binding protein4e-0960.1
NC_011375:749693:751627751627751977351Streptococcus pyogenes NZ131 chromosome, complete genomerepressor-phage associated4e-0960.1
NC_009922:1917271:191727119172711917642372Alkaliphilus oremlandii OhILAs, complete genometranscriptional regulator, XRE family5e-0959.7
NC_007644:280000:287262287262287648387Moorella thermoacetica ATCC 39073, complete genometranscriptional regulator, XRE family6e-0959.7
NC_017208:1831918:183596118359611836299339Bacillus thuringiensis serovar chinensis CT-43 chromosome, completetranscriptional regulator8e-0959.3
NC_008527:1036757:103945210394521039799348Lactococcus lactis subsp. cremoris SK11, complete genomeTranscriptional regulator, xre family6e-0959.3
NC_003212:57061:785057850578981477Listeria innocua Clip11262, complete genomehypothetical protein6e-0959.3
NC_004193:205278:227578227578227943366Oceanobacillus iheyensis HTE831, complete genometranscriptional repressor of PBSX genes8e-0958.9
NC_016052:842762:846086846086846415330Tetragenococcus halophilus NBRC 12172, complete genomeputative Xre family DNA-binding protein9e-0958.9
NC_011837:1935294:195171619517161952501786Clostridium kluyveri NBRC 12016, complete genomehypothetical protein1e-0858.5
NC_009706:2003194:202021320202132020998786Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein1e-0858.5
NC_017025:1651870:166594816659481666286339Flavobacterium indicum GPTSA100-9, complete genometranscriptional regulator, XRE family2e-0858.2
NC_012891:1100726:111421611142161114566351Streptococcus dysgalactiae subsp. equisimilis GGS_124 chromosome 1,putative phage DNA-binding protein2e-0858.2
NC_014551:576000:577723577723578103381Bacillus amyloliquefaciens DSM 7, complete genomehypothetical protein2e-0858.2
NC_010999:561914:563195563195563548354Lactobacillus casei, complete genomeRep protein2e-0857.8
NC_009089:1093832:109383210938321094164333Clostridium difficile 630, complete genomeputative phage regulatory protein2e-0857.8
NC_021182:2536000:253788925378892538323435Clostridium pasteurianum BC1, complete genomeputative transcriptional regulator3e-0857.4
NC_004129:195347:205065205065205427363Pseudomonas fluorescens Pf-5, complete genomeDNA-binding protein, putative4e-0857
NC_008527:2112137:212385221238522124235384Lactococcus lactis subsp. cremoris SK11, complete genomeTranscriptional regulator, xre family4e-0857
NC_015573:2463123:248662424866242486842219Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehelix-turn-helix domain-containing protein4e-0857
NC_012471:2080902:210324921032492103599351Streptococcus equi subsp. equi 4047, complete genomephage DNA-binding protein3e-0857
NC_013921:1915377:192814219281421928690549Thermoanaerobacter italicus Ab9 chromosome, complete genometranscriptional regulator, XRE family4e-0856.6
NC_011898:2509267:251475425147542515374621Clostridium cellulolyticum H10, complete genometranscriptional regulator, XRE family4e-0856.6
NC_016791:2888319:289017028901702890790621Clostridium sp. BNL1100 chromosome, complete genomeresponse regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains4e-0856.6
NC_015958:2174731:218947921894792190027549Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomehelix-turn-helix domain-containing protein5e-0856.6
NC_013798:1778758:179057017905701790932363Streptococcus gallolyticus UCN34, complete genomeputative transcriptional regulator, Cro/CI family5e-0856.6
NC_011660:2924397:292631729263172926793477Listeria monocytogenes HCC23 chromosome, complete genomegp335e-0856.6
NC_017179:1683199:168775916877591688100342Clostridium difficile BI1, complete genomephage repressor6e-0856.2
NC_015913:117966:119554119554119772219Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomeXRE family transcriptional regulator5e-0856.2
NC_003212:2413824:244192224419222442404483Listeria innocua Clip11262, complete genomehypothetical protein5e-0856.2
NC_014650:603500:617995617995618441447Geobacillus sp. Y4.1MC1 chromosome, complete genomehelix-turn-helix domain-containing protein7e-0855.8
NC_015144:900000:908808908808909149342Weeksella virosa DSM 16922 chromosome, complete genomehelix-turn-helix domain protein9e-0855.8
NC_009332:653474:656458656458656808351Streptococcus pyogenes str. Manfredo chromosome, complete genomeDNA-binding phage protein2e-0754.7
NC_013132:5942981:595278159527815953122342Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, XRE family3e-0754.3
NC_016048:2907702:292277429227742922983210Oscillibacter valericigenes Sjm18-20, complete genomeputative Xre family DNA-binding protein2e-0754.3
NC_003485:1228149:123886512388651239620756Streptococcus pyogenes MGAS8232, complete genomeputative repressor2e-0754.3
NC_002737:1207880:121999812199981220753756Streptococcus pyogenes M1 GAS, complete genomeputative repressor - phage associated2e-0754.3
NC_013132:5942981:596067259606725961016345Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, XRE family2e-0754.3
NC_015660:1076159:108793410879341088275342Geobacillus thermoglucosidasius C56-YS93 chromosome, completehelix-turn-helix domain-containing protein2e-0754.3
NC_000964:521975:530691530691531074384Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein2e-0754.3
NC_014828:1019533:103322810332281033584357Ethanoligenens harbinense YUAN-3 chromosome, complete genomehelix-turn-helix domain protein3e-0753.9
NC_009674:2985878:301907730190773019499423Bacillus cytotoxicus NVH 391-98 chromosome, complete genomehelix-turn-helix domain-containing protein4e-0753.5
NC_012984:1027898:102789810278981028224327Lactobacillus plantarum JDM1, complete genometranscription regulator4e-0753.5
NC_014554:1821320:183409318340931834419327Lactobacillus plantarum subsp. plantarum ST-III chromosome,transcription regulator4e-0753.5
NC_013892:1272448:128399912839991284364366Xenorhabdus bovienii SS-2004 chromosome, complete genomeDNA-binding protein4e-0753.5
NC_003485:296140:296536296536296886351Streptococcus pyogenes MGAS8232, complete genomeputative repressor protein5e-0753.1
NC_004606:1107500:114453911445391144889351Streptococcus pyogenes SSI-1, complete genomeputative repressor protein5e-0753.1
NC_004070:747146:751867751867752256390Streptococcus pyogenes MGAS315, complete genomeputative repressor - phage associated5e-0753.1
NC_014657:2127500:214037221403722140905534Caldicellulosiruptor owensensis OL chromosome, complete genomehelix-turn-helix domain protein5e-0753.1
NC_013766:1293144:129361312936131293936324Listeria monocytogenes 08-5578 chromosome, complete genomeputative repressor protein7e-0752.8
NC_013768:1260317:126031712603171260640324Listeria monocytogenes 08-5923, complete genomeputative repressor protein7e-0752.8
NC_013316:2033906:206067020606702061518849Clostridium difficile R20291, complete genometranscription regulator (yobd protein)7e-0752.8
NC_009012:2927793:293408629340862934514429Clostridium thermocellum ATCC 27405, complete genometranscriptional regulator, XRE family7e-0752.8
NC_008555:1204000:120970212097021210175474Listeria welshimeri serovar 6b str. SLCC5334, complete genomephage associated repressor, putative7e-0752.8
NC_016077:1278104:129394612939461294317372Acidaminococcus intestini RyC-MR95 chromosome, complete genomehypothetical protein7e-0752.8
NC_010001:649000:650678650678651022345Clostridium phytofermentans ISDg, complete genometranscriptional regulator, XRE family6e-0752.8
NC_016048:751000:769269769269769643375Oscillibacter valericigenes Sjm18-20, complete genomeputative Xre family DNA-binding protein8e-0752.4
NC_015519:1081539:108624910862491086506258Tepidanaerobacter sp. Re1 chromosome, complete genomehelix-turn-helix domain-containing protein8e-0752.4
NC_015975:923812:941399941399941818420Lactobacillus ruminis ATCC 27782 chromosome, complete genomehypothetical protein1e-0652
NC_015573:2463123:248983824898382490296459Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehelix-turn-helix domain-containing protein1e-0652
NC_014964:2272413:229208922920892292313225Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completehelix-turn-helix domain-containing protein1e-0652
NC_014614:2643203:265647126564712656779309Clostridium sticklandii, complete genomehypothetical protein1e-0652
NC_008525:780500:782987782987783337351Pediococcus pentosaceus ATCC 25745, complete genomeTranscriptional regulator, xre family2e-0651.2
NC_015558:905227:925182925182925535354Streptococcus parauberis KCTC 11537 chromosome, complete genomeputative repressor - phage associated2e-0650.8
NC_015437:1494777:150426615042661504889624Selenomonas sputigena ATCC 35185 chromosome, complete genomehelix-turn-helix domain protein4e-0650.4
NC_013766:679906:683546683546683872327Listeria monocytogenes 08-5578 chromosome, complete genometranscriptional regulator5e-0650.1
NC_009633:2592000:263151726315172631879363Alkaliphilus metalliredigens QYMF chromosome, complete genomehelix-turn-helix domain-containing protein4e-0650.1
NC_009253:529494:536731536731537033303Desulfotomaculum reducens MI-1 chromosome, complete genomeXRE family transcriptional regulator4e-0650.1
NC_020291:795500:818708818708819061354Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeputative transcriptional regulator4e-0650.1
NC_012471:781063:786052786052786402351Streptococcus equi subsp. equi 4047, complete genomephage repressor6e-0649.7
NC_020272:2692746:269463426946342694972339Bacillus amyloliquefaciens IT-45, complete genomeHTH-type transcriptional regulator6e-0649.7
NC_007168:1839382:185295318529531853291339Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein7e-0649.3
NC_015558:1485762:148904014890401489570531Streptococcus parauberis KCTC 11537 chromosome, complete genomeDNA-binding phage protein8e-0649.3
NC_015913:117966:118288118288118545258Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomehypothetical protein9e-0648.9
NC_017294:115500:118873118873119088216Candidatus Arthromitus sp. SFB-mouse-Yit, complete genometranscriptional regulator9e-0648.9