Pre_GI: BLASTP Hits

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Query: NC_009480:2932108:2938124 Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete

Start: 2938124, End: 2938450, Length: 327

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Phytopathogen that causes bacterial wilt and canker of tomato (Lycopersicon esculentum). This is considered to be the most important bacterial disease of tomato causing substantial economic losses worldwide. Bacteria enter the plant by wounds on root or stem and then find their way into the xylem allowing a massive systemic colonization. The first stage of the disease is characterized by unilateral wilting of leaves. Wilting then spreads to all leaves, canker lesions develop on the stem and the plant dies. If infection occurs at a late stage of plant development, plants can survive and yield fruit that may have spots, so called bird's eyes. Often the seeds will be infected and this has been the major source for outbreaks of Clavibacter michiganensis subsp. michiganensis infections in agriculture. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010407:316320:330087330087330413327Clavibacter michiganensis subsp. sepedonicus chromosome, complete50s ribosomal protein l299e-26115
NC_014151:2945037:295293629529362953172237Cellulomonas flavigena DSM 20109 chromosome, complete genomeribosomal protein L291e-21101
NC_015514:1088767:111104311110431111282240Cellulomonas fimi ATCC 484 chromosome, complete genome50S ribosomal protein L291e-21101
NC_015145:2994418:299516129951612995490330Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genome50S ribosomal protein L29P9e-2199
NC_015588:701606:719277719277719516240Isoptericola variabilis 225 chromosome, complete genomeribosomal protein L292e-2097.8
NC_013521:3285423:329638032963803296619240Sanguibacter keddieii DSM 10542, complete genomeLSU ribosomal protein L29P3e-2097.1
NC_014246:373247:389536389536389778243Mobiluncus curtisii ATCC 43063 chromosome, complete genome50S ribosomal protein L297e-1682.4
NC_012803:1839809:185343718534371853706270Micrococcus luteus NCTC 2665, complete genomeLSU ribosomal protein L29P1e-1581.6
NC_009664:1569335:158364115836411583892252Kineococcus radiotolerans SRS30216, complete genomeribosomal protein L293e-1580.5
NC_010617:665830:680654680654680950297Kocuria rhizophila DC2201, complete genome50S ribosomal protein L291e-1478.6
NC_013595:1100230:111764711176471117883237Streptosporangium roseum DSM 43021, complete genome50S ribosomal protein L291e-1375.1
NC_016109:3525588:355707335570733557297225Kitasatospora setae KM-6054, complete genome50S ribosomal protein L296e-1372.8
NC_015957:690817:693587693587693811225Streptomyces violaceusniger Tu 4113 chromosome, complete genome50S ribosomal protein L296e-1372.8
NC_003888:5114147:513248451324845132708225Streptomyces coelicolor A3(2), complete genome50S ribosomal protein L296e-1372.8
NC_003155:5987000:599200859920085992232225Streptomyces avermitilis MA-4680, complete genomeribosomal protein L297e-1372.8
NC_013929:4136742:415496941549694155193225Streptomyces scabiei 87.22 chromosome, complete genome50S ribosomal protein L297e-1372.4
NC_015953:4385419:441003144100314410255225Streptomyces sp. SirexAA-E chromosome, complete genome50S ribosomal protein L291e-1271.6
NC_016114:2960989:297599929759992976223225Streptomyces flavogriseus ATCC 33331 chromosome, complete genome50S ribosomal protein L291e-1271.6
NC_018750:4728870:473929747392974739521225Streptomyces venezuelae ATCC 10712, complete genomeLSU ribosomal protein L29p1e-1271.6
NC_010572:3314500:332974533297453329969225Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative 50S ribosomal protein L292e-1271.2
NC_021177:4945878:496090449609044961128225Streptomyces fulvissimus DSM 40593, complete genome50S ribosomal protein L292e-1271.2
NC_014211:258659:282138282138282389252Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 plasmidribosomal protein L292e-1271.2
NC_013169:2147111:214889521488952149131237Kytococcus sedentarius DSM 20547, complete genomeLSU ribosomal protein L29P8e-1268.9
NC_014165:597000:630983630983631219237Thermobispora bispora DSM 43833 chromosome, complete genome50S ribosomal protein L292e-1167.4
NC_014644:1532500:156970815697081569959252Gardnerella vaginalis ATCC 14019 chromosome, complete genome50S ribosomal protein L293e-1167
NC_013721:276717:288212288212288463252Gardnerella vaginalis 409-05, complete genomeribosomal protein L293e-1167
NC_016111:3865823:387759538775953877819225Streptomyces cattleya NRRL 8057, complete genome50S ribosomal protein L294e-1166.6
NC_013757:4707960:472065347206534720886234Geodermatophilus obscurus DSM 43160, complete genomeribosomal protein L291e-1065.1
NC_013159:380014:403311403311403562252Saccharomonospora viridis DSM 43017, complete genomeLSU ribosomal protein L29P1e-1065.1
NC_014666:7641060:766061476606147660859246Frankia sp. EuI1c chromosome, complete genomeribosomal protein L291e-1064.7
NC_016943:4145981:414779241477924148025234Blastococcus saxobsidens DD2, complete genome50S ribosomal protein L292e-1064.7
NC_017955:4888990:490317749031774903410234Modestobacter marinus, complete genome50S ribosomal protein L292e-1064.7
NC_019673:8734993:875107687510768751324249Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein4e-1063.5
NC_013093:7722436:774255477425547742802249Actinosynnema mirum DSM 43827, complete genomeribosomal protein L295e-1063.2
NC_006361:792904:799190799190799429240Nocardia farcinica IFM 10152, complete genome50S ribosomal protein L297e-1062.4
NC_014391:6175531:617840861784086178644237Micromonospora aurantiaca ATCC 27029 chromosome, complete genome50S ribosomal protein L292e-0961.2
NC_014815:622048:623673623673623909237Micromonospora sp. L5 chromosome, complete genomeribosomal protein l292e-0961.2
NC_020134:2801199:281853728185372818737201Clostridium stercorarium subsp. stercorarium DSM 8532, complete50S ribosomal protein L293e-0960.5
NC_014964:388458:418891418891419100210Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, complete50S ribosomal protein L298e-0959.3
NC_014538:1998180:200496220049622005171210Thermoanaerobacter sp. X513 chromosome, complete genome50S ribosomal protein L298e-0959.3
NC_010320:881351:909413909413909622210Thermoanaerobacter sp. X514 chromosome, complete genome50S ribosomal protein L298e-0959.3
NC_015958:2251619:229008922900892290298210Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genome50S ribosomal protein L297e-0959.3
NC_014209:1910109:193959319395931939802210Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,ribosomal protein L297e-0959.3
NC_013921:1977444:200692020069202007129210Thermoanaerobacter italicus Ab9 chromosome, complete genomeribosomal protein L297e-0959.3
NC_014829:133305:161055161055161258204Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeribosomal protein L291e-0858.9
NC_011899:124500:140891140891141106216Halothermothrix orenii H 168, complete genomeribosomal protein L292e-0857.8
NC_013406:6422000:642798164279816428178198Paenibacillus sp. Y412MC10 chromosome, complete genome50S ribosomal protein L292e-0857.8
NC_009454:316000:333367333367333570204Pelotomaculum thermopropionicum SI, complete genome50S ribosomal protein L295e-0856.6
NC_010718:193231:224366224366224563198Natranaerobius thermophilus JW/NM-WN-LF, complete genomeLSU ribosomal protein L29P6e-0856.2
NC_014410:403776:433736433736433939204Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,ribosomal protein L298e-0855.8
NC_019970:336472:388855388855389058204Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeribosomal protein L298e-0855.8
NC_015555:327562:357549357549357752204Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeribosomal protein L298e-0855.8
NC_009616:979861:992960992960993160201Thermosipho melanesiensis BI429 chromosome, complete genome50S ribosomal protein L299e-0855.8
NC_014171:109280:132402132402132602201Bacillus thuringiensis BMB171 chromosome, complete genome50S ribosomal protein L29P1e-0755.5
NC_017208:108134:134451134451134651201Bacillus thuringiensis serovar chinensis CT-43 chromosome, complete50S ribosomal protein L291e-0755.5
NC_011999:198769:208053208053208277225Macrococcus caseolyticus JCSC5402, complete genome50S ribosomal protein L291e-0755.1
NC_018664:2357882:237043723704372370640204Clostridium acidurici 9a chromosome, complete genome50S ribosomal protein L291e-0755.1
NC_007503:2063451:206907820690782069287210Carboxydothermus hydrogenoformans Z-2901, complete genomeribosomal protein L291e-0755.1
NC_004193:119737:145929145929146129201Oceanobacillus iheyensis HTE831, complete genome50S ribosomal protein L292e-0754.7
NC_014654:2101500:210843921084392108654216Halanaerobium sp. 'sapolanicus' chromosome, complete genomeribosomal protein L293e-0754.3
NC_013385:1504650:151223415122341512443210Ammonifex degensii KC4, complete genomeribosomal protein L293e-0753.9
NC_017095:1429298:144588014458801446080201Fervidobacterium pennivorans DSM 9078 chromosome, complete genome50S ribosomal protein L294e-0753.5
NC_009437:2367842:240085224008522401070219Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeribosomal protein L294e-0753.5
NC_014220:2239594:225629222562922256498207Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeribosomal protein L294e-0753.5
NC_015682:736746:750663750663750860198Thermodesulfobacterium sp. OPB45 chromosome, complete genome50S ribosomal protein L294e-0753.5
NC_019978:178277:202312202312202515204Halobacteroides halobius DSM 5150, complete genomeribosomal protein L294e-0753.5
NC_014657:1540500:155128615512861551504219Caldicellulosiruptor owensensis OL chromosome, complete genomeribosomal protein l295e-0753.1
NC_015949:1180755:121305012130501213268219Caldicellulosiruptor lactoaceticus 6A chromosome, complete genome50S ribosomal protein L295e-0753.1
NC_008262:2598920:261273726127372612946210Clostridium perfringens SM101, complete genomeribosomal protein L295e-0753.1
NC_003366:2731995:274770427477042747913210Clostridium perfringens str. 13, complete genome50S ribosomal protein L295e-0753.1
NC_014392:969498:977978977978978196219Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeribosomal protein L295e-0753.1
NC_008261:2957354:297034929703492970558210Clostridium perfringens ATCC 13124, complete genomeribosomal protein L295e-0753.1
NC_014721:1777644:181006218100621810280219Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeribosomal protein l295e-0753.1
NC_018704:124823:143151143151143351201Amphibacillus xylanus NBRC 15112, complete genome50S ribosomal protein L295e-0753.1
NC_003911:480202:496675496675496875201Silicibacter pomeroyi DSS-3, complete genomeribosomal protein L295e-0753.1
NC_014720:1140765:114925311492531149471219Caldicellulosiruptor kronotskyensis 2002 chromosome, completeribosomal protein l295e-0753.1
NC_012034:1783912:181633318163331816551219Anaerocellum thermophilum DSM 6725, complete genomeribosomal protein L295e-0753.1
NC_014652:1032711:104188610418861042104219Caldicellulosiruptor hydrothermalis 108 chromosome, completeribosomal protein l295e-0753.1
NC_008555:2597980:260713826071382607329192Listeria welshimeri serovar 6b str. SLCC5334, complete genomeribosomal protein L297e-0752.8
NC_014377:112992:132200132200132397198Thermosediminibacter oceani DSM 16646 chromosome, complete genomeLSU ribosomal protein L29P7e-0752.8
NC_009718:1207360:121928512192851219485201Fervidobacterium nodosum Rt17-B1, complete genome50S ribosomal protein L298e-0752.4
NC_015759:536929:549713549713549919207Weissella koreensis KACC 15510 chromosome, complete genome50S ribosomal protein L291e-0652
NC_017096:1081904:109249810924981092701204Caldisericum exile AZM16c01, complete genome50S ribosomal protein L292e-0651.6
NC_015516:131564:141843141843142034192Melissococcus plutonius ATCC 35311, complete genome50S ribosomal protein L29p (L35e)1e-0651.6
NC_016938:136331:143723143723143914192Melissococcus plutonius DAT561 chromosome 1, complete genome50S ribosomal protein L29p1e-0651.6
NC_007795:2299327:231331023133102313519210Staphylococcus aureus subsp. aureus NCTC 8325, complete genomeribosomal protein L292e-0651.2
NC_004461:1849176:186256418625641862773210Staphylococcus epidermidis ATCC 12228, complete genome50S ribosomal protein L292e-0651.2
NC_012121:1728913:174167217416721741881210Staphylococcus carnosus subsp. carnosus TM300, complete genome50S ribosomal protein L292e-0651.2
NC_002758:2359329:237331223733122373521210Staphylococcus aureus subsp. aureus Mu50, complete genome50S ribosomal protein L292e-0651.2
NC_007168:813957:824002824002824211210Staphylococcus haemolyticus JCSC1435, complete genome50S ribosomal protein L292e-0651.2
NC_013893:830282:840442840442840651210Staphylococcus lugdunensis HKU09-01 chromosome, complete genomeLSU ribosomal protein L29p (L35e)2e-0651.2
NC_009782:2362000:237495023749502375159210Staphylococcus aureus subsp. aureus Mu3, complete genome50S ribosomal protein L292e-0651.2
NC_002745:2289829:230381223038122304021210Staphylococcus aureus subsp. aureus N315, complete genome50S ribosomal protein L292e-0651.2
NC_007622:2239799:225378022537802253989210Staphylococcus aureus RF122, complete genome50S ribosomal protein L292e-0651.2
NC_002976:1844901:185759418575941857803210Staphylococcus epidermidis RP62A, complete genomeribosomal protein L292e-0651.2
NC_002951:2288674:230265723026572302866210Staphylococcus aureus subsp. aureus COL, complete genomeribosomal protein L292e-0651.2
NC_009828:600349:613538613538613738201Thermotoga lettingae TMO, complete genomeribosomal protein L292e-0651.2
NC_016584:233486:241739241739241942204Desulfosporosinus orientis DSM 765 chromosome, complete genome50S ribosomal protein L292e-0651.2
NC_013642:1317114:133054413305441330744201Thermotoga naphthophila RKU-10, complete genomeribosomal protein L292e-0651.2
NC_000853:1480478:149392414939241494124201Thermotoga maritima MSB8, complete genomeribosomal protein L292e-0651.2
NC_010483:1385000:140103314010331401233201Thermotoga sp. RQ2, complete genomeribosomal protein L292e-0651.2
NC_009486:1293510:130694013069401307140201Thermotoga petrophila RKU-1 chromosome, complete genome50S ribosomal protein L292e-0651.2
NC_002952:2390668:240275924027592402968210Staphylococcus aureus subsp. aureus MRSA252, complete genome50S ribosomal protein L292e-0651.2
NC_020164:701151:712285712285712494210Staphylococcus warneri SG1, complete genome50S ribosomal protein L292e-0651.2
NC_002953:2282236:229432222943222294531210Staphylococcus aureus subsp. aureus MSSA476, complete genome50S ribosomal protein L292e-0651.2
NC_010079:2352691:236667423666742366883210Staphylococcus aureus subsp. aureus USA300_TCH1516, completeribosomal protein L292e-0651.2
NC_017347:2350802:236478523647852364994210Staphylococcus aureus subsp. aureus T0131 chromosome, complete50S ribosomal protein L292e-0651.2
NC_017351:2335753:234973723497372349946210Staphylococcus aureus subsp. aureus 11819-97 chromosome, complete50S ribosomal protein L292e-0651.2
NC_017353:825856:836016836016836225210Staphylococcus lugdunensis N920143, complete genome50S ribosomal protein L292e-0651.2
NC_009633:4563877:457330345733034573506204Alkaliphilus metalliredigens QYMF chromosome, complete genome50S ribosomal protein L292e-0651.2
NC_003923:2301234:231521723152172315438222Staphylococcus aureus subsp. aureus MW2, complete genome50S ribosomal protein L292e-0651.2
NC_007793:2352953:236652423665242366745222Staphylococcus aureus subsp. aureus USA300, complete genome50S ribosomal protein L292e-0651.2
NC_009641:2357468:237103823710382371259222Staphylococcus aureus subsp. aureus str. Newman chromosome,50S ribosomal protein L292e-0651.2
NC_010003:795355:825246825246825446201Petrotoga mobilis SJ95, complete genomeribosomal protein L292e-0651.2
NC_017343:2212780:222676322267632226972210Staphylococcus aureus subsp. aureus ECT-R 2, complete genome50S ribosomal protein L292e-0651.2
NC_017342:1012555:102380510238051024014210Staphylococcus aureus subsp. aureus TCH60 chromosome, complete50S ribosomal protein L292e-0651.2
NC_017341:2384736:239871923987192398928210Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,50S ribosomal protein L292e-0651.2
NC_009487:2390713:240360724036072403816210Staphylococcus aureus subsp. aureus JH9 chromosome, complete50S ribosomal protein L292e-0651.2
NC_009632:2391397:240348324034832403692210Staphylococcus aureus subsp. aureus JH1 chromosome, complete50S ribosomal protein L292e-0651.2
NC_013450:2306431:232000223200022320211210Staphylococcus aureus subsp. aureus ED98, complete genome50S ribosomal protein L292e-0651.2
NC_016912:2170615:218459821845982184807210Staphylococcus aureus subsp. aureus VC40 chromosome, complete50S ribosomal protein L292e-0651.2
NC_016928:2249907:226347222634722263681210Staphylococcus aureus subsp. aureus M013 chromosome, complete50S ribosomal protein L292e-0651.2
NC_016941:2234937:224846222484622248671210Staphylococcus aureus subsp. aureus MSHR1132, complete genome50S ribosomal protein L292e-0651.2
NC_017337:2319847:233341723334172333626210Staphylococcus aureus subsp. aureus ED133 chromosome, complete50S ribosomal protein L292e-0651.2
NC_017338:2296906:230980023098002310009210Staphylococcus aureus subsp. aureus JKD6159 chromosome, complete50S ribosomal protein L292e-0651.2
NC_011297:833387:851472851472851675204Dictyoglomus thermophilum H-6-12, complete genomeribosomal protein L293e-0650.8
NC_011978:975333:987158987158987358201Thermotoga neapolitana DSM 4359, complete genome50S ribosomal protein L293e-0650.8
NC_009922:542500:563994563994564197204Alkaliphilus oremlandii OhILAs, complete genomeribosomal protein L293e-0650.8
NC_007350:692041:703300703300703509210Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,50S ribosomal protein L292e-0650.8
NC_013522:1213599:122063612206361220851216Thermanaerovibrio acidaminovorans DSM 6589, complete genomeribosomal protein L292e-0650.8
NC_018515:223164:243012243012243215204Desulfosporosinus meridiei DSM 13257 chromosome, complete genome50S ribosomal protein L292e-0650.8
NC_014925:1970500:197724119772411977450210Staphylococcus pseudintermedius HKU10-03 chromosome, completeLSU ribosomal protein L29p (L35e)2e-0650.8
NC_015707:705628:725826725826726026201Thermotoga thermarum DSM 5069 chromosome, complete genome50S ribosomal protein L29P3e-0650.4
NC_011653:1226035:124013812401381240338201Thermosipho africanus TCF52B, complete genomeribosomal protein L294e-0650.4
NC_014152:305955:322514322514322717204Thermincola sp. JR, complete genomeribosomal protein L294e-0650.1