Pre_GI: BLASTP Hits

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Query: NC_009092:3732390:3733918 Shewanella loihica PV-4, complete genome

Start: 3733918, End: 3734706, Length: 789

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011740:165363:165363165363166133771Escherichia fergusonii ATCC 35469, complete genomeputative transporter subunit: membrane component of ABC superfamily8e-96350
NC_011748:143755:143755143755144525771Escherichia coli 55989, complete genomeputative transporter subunit: membrane component of ABC superfamily1e-95349
CU928145:143755:143755143755144525771Escherichia coli 55989 chromosome, complete genomeputative transporter subunit: membrane component of ABC superfamily1e-95349
AP010958:143358:145052145052145822771Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted transporter subunit1e-95349
NC_004431:153907:153907153907154677771Escherichia coli CFT073, complete genomeHypothetical protein yadH1e-95349
NC_010468:3835259:385511138551113855881771Escherichia coli ATCC 8739, complete genomeABC-2 type transporter1e-95349
NC_007946:149733:149733149733150503771Escherichia coli UTI89, complete genomehypothetical protein1e-95349
CP002516:3949061:396612339661233966893771Escherichia coli KO11, complete genomeABC-2 type transporter1e-95349
NC_008563:149709:149709149709150479771Escherichia coli APEC O1, complete genomehypothetical protein1e-95349
NC_009801:143426:145120145120145890771Escherichia coli E24377A, complete genomeABC transporter, permease protein1e-95349
NC_011601:149428:149428149428150198771Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometransporter subunit: membrane component of ABC superfamily1e-95349
NC_016902:3949061:396612339661233966893771Escherichia coli KO11FL chromosome, complete genomeABC transporter1e-95349
NC_013364:143492:145186145186145956771Escherichia coli O111:H- str. 11128, complete genomeputative transporter subunit1e-95349
NC_013361:145461:146384146384147154771Escherichia coli O26:H11 str. 11368 chromosome, complete genometransporter subunit1e-95349
NC_013353:143358:145052145052145822771Escherichia coli O103:H2 str. 12009, complete genometransporter subunit1e-95349
NC_012967:145582:146505146505147275771Escherichia coli B str. REL606 chromosome, complete genomeputative transporter subunit membrane component of ABC superfamily1e-95349
NC_012947:3619384:363644636364463637216771Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeABC transporter1e-95349
NC_011745:149594:149594149594150364771Escherichia coli ED1a chromosome, complete genomeputative ABC transporter membrane protein1e-95349
NC_011742:149732:149732149732150502771Escherichia coli S88 chromosome, complete genometransporter subunit: membrane component of ABC superfamily1e-95349
NC_010498:153755:153755153755154525771Escherichia coli SMS-3-5, complete genomeABC transporter, permease protein1e-95349
NC_016818:3986570:399110539911053991875771Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeABC-type polysaccharide/polyol phosphate export systems permease1e-92339
NC_017047:4037674:404268240426824043452771Rahnella aquatilis HX2 chromosome, complete genomeinner membrane transport permease4e-92337
NC_017267:4232771:424963742496374250428792Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completepermease1e-79296
NC_015733:1680500:169946016994601700233774Pseudomonas putida S16 chromosome, complete genomeABC transporter permease2e-77288
NC_002488:1157684:117104011710401171819780Xylella fastidiosa 9a5c, complete genomehypothetical protein1e-73276
NC_018677:73254:732547325474015762Candidatus Portiera aleyrodidarum BT-B-HRs chromosome, completeABC-type multidrug transport system permease component3e-72271
NC_018507:79686:796867968680447762Candidatus Portiera aleyrodidarum BT-B chromosome, complete genomeABC-type polysaccharide/polyol phosphate export systems permease3e-72271
NC_018643:754104:781614781614782381768Alpha proteobacterium HIMB5 chromosome, complete genomeABC-2 type transporter2e-45182
NC_018644:137755:141801141801142562762Alpha proteobacterium HIMB59 chromosome, complete genomeABC-2 type transporter4e-45181
NC_012968:325529:337611337611338414804Methylotenera mobilis JLW8, complete genomeABC-2 type transporter1e-43176
NC_008740:1635137:163760316376031638364762Marinobacter aquaeolei VT8, complete genomeABC-2 type transporter3e-43175
NC_017506:1832443:183398418339841834745762Marinobacter adhaerens HP15 chromosome, complete genomeABC transporter permease6e-43174
NC_008825:846916:867937867937868692756Methylibium petroleiphilum PM1, complete genomeputative transmembrane protein5e-42171
NC_017030:572871:577197577197577958762Corallococcus coralloides DSM 2259 chromosome, complete genomeABC transporter permease6e-42171
NC_014323:4665610:466561046656104666374765Herbaspirillum seropedicae SmR1 chromosome, complete genomemultidrug ABC transporter permease2e-41169
NC_008752:1119323:112035111203511121106756Acidovorax avenae subsp. citrulli AAC00-1, complete genomeABC-2 type transporter2e-36152
NC_020388:693479:697160697160697858699Natronomonas moolapensis 8.8.11 complete genomeABC-type transport system permease protein3e-30132
NC_007404:1964935:199165419916541992409756Thiobacillus denitrificans ATCC 25259, complete genomeABC-2 type transport system permease protein4e-29128
NC_014297:1282302:129413612941361294645510Halalkalicoccus jeotgali B3 chromosome, complete genomeantibiotic transport system permease protein8e-23107
NC_018870:354164:358671358671359405735Thermacetogenium phaeum DSM 12270 chromosome, complete genomeABC-2 type transporter3e-1892.4
NC_015416:1872000:188664518866451887382738Methanosaeta concilii GP-6 chromosome, complete genomeABC-2 type transporter1e-1790.5
NC_011832:1148859:115521411552141155978765Candidatus Methanosphaerula palustris E1-9c, complete genomedaunorubicin resistance ABC transporter, inner membrane subunit B1e-1583.6
NC_015573:2187688:220656622065662207357792Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeABC-2 type transporter1e-1480.1
NC_008702:369965:375522375522376307786Azoarcus sp. BH72, complete genomeABC transporter permease NodJ4e-1478.6
NC_015474:72103:766907669077454765Pyrococcus sp. NA2 chromosome, complete genomedaunorubicin resistance membrane protein6e-1477.8
NC_014408:1340016:135862013586201359384765Methanothermobacter marburgensis str. Marburg chromosome, completeABC transporter, permease component1e-1273.6
NC_015381:2109500:213320721332072134043837Burkholderia gladioli BSR3 chromosome 1, complete sequenceABC transporter1e-1170.5
NC_003272:5040500:505527050552705056097828Nostoc sp. PCC 7120, complete genomehypothetical protein3e-1168.9
NC_011894:4066926:409996140999614100752792Methylobacterium nodulans ORS 2060, complete genomeABC-2 type transporter, NodJ family1e-1067
NC_007413:868678:870628870628871455828Anabaena variabilis ATCC 29413, complete genomeABC-21e-1066.6
NC_013921:2375900:239742423974242398158735Thermoanaerobacter italicus Ab9 chromosome, complete genomeABC-2 type transporter2e-1066.6
NC_014297:1282302:128880012888001289105306Halalkalicoccus jeotgali B3 chromosome, complete genomeantibiotic transport system permease protein2e-1065.9
NC_018870:2537350:254410525441052544848744Thermacetogenium phaeum DSM 12270 chromosome, complete genomeputative ABC-2-like transporter, permease protein4e-1065.1
NC_015574:1474967:149486814948681495620753Methanobacterium sp. SWAN-1 chromosome, complete genomedaunorubicin resistance ABC transporter, inner membrane subunit B1e-0963.9
NC_000914:135534:154120154120154908789Rhizobium sp. NGR234 plasmid pNGR234a, complete sequenceNodJ1e-0963.9
NC_000917:1693500:169446416944641695219756Archaeoglobus fulgidus DSM 4304, complete genomedaunorubicin resistance membrane protein (drrB)1e-0963.5
NC_015573:2187688:220752122075212208357837Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeABC-2 type transporter2e-0962.8
NC_011832:2668337:269223726922372692986750Candidatus Methanosphaerula palustris E1-9c, complete genomedaunorubicin resistance ABC transporter, inner membrane subunit B3e-0962.4
NC_000961:801902:821342821342822115774Pyrococcus horikoshii OT3, complete genomehypothetical protein4e-0962
NC_010511:4258000:426666442666644267452789Methylobacterium sp. 4-46 chromosome, complete genomeABC transporter4e-0962
NC_007796:1731500:175867317586731759422750Methanospirillum hungatei JF-1, complete genomeABC-25e-0961.6
NC_015574:2322811:2341886234188623430701185Methanobacterium sp. SWAN-1 chromosome, complete genomeABC-2 type transporter9e-0960.8
NC_003901:2906493:292788829278882928652765Methanosarcina mazei Go1, complete genomeABC transporter, permease protein1e-0860.1
NC_020389:2473160:248907424890742489838765Methanosarcina mazei Tuc01, complete genomeABC transporter, permease protein1e-0860.1
NC_019673:1456999:147665114766511477484834Saccharothrix espanaensis DSM 44229 complete genomeABC-2 type transporter2e-0859.3
NC_010529:296500:306893306893307681789Cupriavidus taiwanensis plasmid pRALTA, complete sequenceNodJ membrane transport nodulation protein, ABC-type transporter9e-0857.4
NC_013510:2782240:280139728013972802263867Thermomonospora curvata DSM 43183, complete genomeABC-2 type transporter1e-0757
NC_015677:3685452:368858836885883689385798Ramlibacter tataouinensis TTB310 chromosome, complete genomeABC transporter permease3e-0755.8
NC_015675:6615245:662346866234686624256789Mesorhizobium opportunistum WSM2075 chromosome, complete genomeABC transporter, NodJ family5e-0755.1
NC_014923:6060859:606880060688006069588789Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeABC-2 type transporter, NodJ family5e-0755.1
NC_019973:5989816:599775759977575998545789Mesorhizobium australicum WSM2073, complete genomeABC-2 type transporter, NodJ family5e-0755.1
NC_013385:1617338:162207416220741622640567Ammonifex degensii KC4, complete genomeABC-2 type transporter9e-0754.3
NC_016048:693416:710309710309711025717Oscillibacter valericigenes Sjm18-20, complete genomeputative ABC transporter permease protein1e-0653.9
NC_004463:2158116:219009521900952190883789Bradyrhizobium japonicum USDA 110, complete genomeNodJ protein1e-0653.9
NC_017249:7993713:808709980870998087887789Bradyrhizobium japonicum USDA 6, complete genomeNodJ protein1e-0653.9
NC_010506:2441944:246317224631722463945774Shewanella woodyi ATCC 51908, complete genomeABC-2 type transporter1e-0653.9
NC_013169:2581500:259874725987472599661915Kytococcus sedentarius DSM 20547, complete genomeABC-type multidrug transport system, permease component1e-0653.5
NC_003552:1008475:102979610297961030539744Methanosarcina acetivorans C2A, complete genomemultidrug ABC transporter, permease protein1e-0653.5
NC_011368:678291:688080688080688868789Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG201,NodJ family ABC-type transporter2e-0653.1
NC_010655:1606901:1644002164400216451141113Akkermansia muciniphila ATCC BAA-835, complete genomeABC-2 type transporter2e-0652.8
NC_019792:3027515:303607230360723036989918Natronobacterium gregoryi SP2 chromosome, complete genomemultidrug ABC transporter permease3e-0652.4
NC_016001:865666:869964869964870815852Flavobacterium branchiophilum, complete genomeputative polysaccharide/polyol phosphate ABC transporter permease5e-0651.6