Pre_GI Gene

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Host: NC_018870 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_018870:2537350 Thermacetogenium phaeum DSM 12270 chromosome, complete genome

Host Lineage: Thermacetogenium phaeum; Thermacetogenium; Thermoanaerobacteraceae; Thermoanaerobacterales; Firmicutes; Bacteria

General Information: Nitrogen fixation. Thermophilic strictly anaerobic bacterium oxidizing acetate to CO2 in syntrophic association with a methanogenic partner. Capable of growing with various substrates such as alcohols and methylated nitrogen compounds, and to reduce sulfate in the presence of acetate. Isolated from sludge of an anaerobic digester run at 58 degrees C. Thermacetogenium phaeum is a strictly anaerobic, homoacetogenic bacterium. It is exceptional because it can use the homoacetogenic Wood-Ljungdahl (CO- dehydrogenase) pathway both for acetate formation and acetate oxidation. Acetate oxidation is possible only in syntrophic cooperation with a methanogenic partner which maintains a low hydrogen and/or formate concentration in the coculture. With this, the bacterium operates close to the thermodynamic equilibrium of substrate conversion, similar to other syntrophically fermenting bacteria such as Syntrophomonas wolfei the genomes of which have been sequenced as well in the recent past.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
25373502538069720oligopeptide transport ATP-binding protein OppFQuickGO ontologyBLASTP
25380592539003945oligopeptide transport ATP-binding protein OppDQuickGO ontologyBLASTP
25395862539978393nucleotidyl transferase domain-containing proteinQuickGO ontology
25399592540477519hypothetical proteinBLASTP
25406652541603939putative SAM-dependent methyltransferaseQuickGO ontologyBLASTP
254162525431931569heme-binding protein AQuickGO ontologyBLASTP
25433112543682372oligopeptidedipeptide ABC transporter ATPase subunitQuickGO ontologyBLASTP
25441052544848744putative ABC-2-like transporter permease proteinQuickGO ontologyBLASTP
25448522545781930nod factor export ATP-binding protein IQuickGO ontologyBLASTP
25457782546683906putative radical SAM domain-containing proteinQuickGO ontology
25466902547640951radical SAM domain-containing proteinQuickGO ontologyBLASTP
25476692547947279putative coenzyme PQQ synthesis protein DQuickGO ontology
254789325489151023coenzyme PQQ synthesis protein EQuickGO ontologyBLASTP
254917125507601590oligopeptide-binding protein AppAQuickGO ontologyBLASTP
25516732552227555type II-like restriction endonucleaseQuickGO ontologyBLASTP
25523252553293969oligopeptide transport ATP-binding protein AppFQuickGO ontologyBLASTP
25532902554288999oligopeptide transport ATP-binding protein OppDQuickGO ontologyBLASTP
25543432554678336glutathione transport system permease protein GsiDQuickGO ontologyBLASTP
255474325564431701IS4-like transposaseQuickGO ontologyBLASTP
25565222557145624nickel transport system permease protein NikCQuickGO ontologyBLASTP
25571802558118939nickel transport system permease protein NikBQuickGO ontologyBLASTP
25585992558994396pyridoxamine 5-phosphate oxidase-like proteinQuickGO ontologyBLASTP
25591572559348192hypothetical protein
255934525612611917ATP-dependent helicase YoaAQuickGO ontologyBLASTP