Pre_GI Gene

Some Help

Host: NC_007413 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007413:868678 Anabaena variabilis ATCC 29413, complete genome

Host Lineage: Anabaena variabilis; Anabaena; Nostocaceae; Nostocales; Cyanobacteria; Bacteria

General Information: These cyanobacteria are bluegreen algae that are capable of fixing carbon and nitrogen. They form long filaments and can be found worldwide in various aquatic environments as well as some terrestrial ones. These bacteria can form a variety of differentiated cell types, including spore-like cells (akinetes), small motile filaments (hormongia) and most importantly, heterocysts that are nitrogen-producing cells. The heterocyst produces multiple layers outside of its cell wall, shuts down photosystem II in order to inhibit oxygenic photosynthesis and ramps up metabolism in order to use up the oxygen present. Heterocysts donate fixed nitrogen compounds as amino acids to neighboring cells and in return receive a photosynthetically produced carbon source such as sucrose. These organisms produce toxic blooms in aquatic environments that are harmful or fatal to animals and humans due to the various cyanotoxins they produce. Anabaena variabilis is a filamentous heterocyst-forming cyanobacterium that fixes nitrogen and CO2 using the energy of sunlight via oxygen-evolving plant-type photosynthesis. In addition, this organism has been studied extensively for the production of hydrogen using solar energy.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
868678869541864Alphabeta hydrolase foldQuickGO ontologyBLASTP
869853870311459Pentapeptide repeatQuickGO ontologyBLASTP
870628871455828ABC-2QuickGO ontologyBLASTP
871550872008459hypothetical proteinBLASTP
872152872619468GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
872691873179489NADH dehydrogenase I subunit NQuickGO ontologyBLASTP
87406787470263650S ribosomal protein L3QuickGO ontologyBLASTP
87476787539963350S ribosomal protein L4QuickGO ontologyBLASTP
87539287570631550S ribosomal protein L23QuickGO ontologyBLASTP
87571387657686450S ribosomal protein L2QuickGO ontologyBLASTP
876660876938279Ribosomal protein S19QuickGO ontologyBLASTP
87702387738236050S ribosomal protein L22QuickGO ontologyBLASTP
87743587821778330S ribosomal protein S3QuickGO ontologyBLASTP
87831687874442950S ribosomal protein L16QuickGO ontologyBLASTP
87874887897222550S ribosomal protein L29QuickGO ontologyBLASTP
87898587923024630S ribosomal protein S17QuickGO ontologyBLASTP
879269879637369Ribosomal protein L14QuickGO ontologyBLASTP
87963787999035450S ribosomal protein L24QuickGO ontologyBLASTP
88009788064554950S ribosomal protein L5QuickGO ontologyBLASTP
88066688106740230S ribosomal protein S8QuickGO ontologyBLASTP
88116488171254950S ribosomal protein L6QuickGO ontologyBLASTP
88171588207736350S ribosomal protein L18QuickGO ontologyBLASTP
88215688268052530S ribosomal protein S5QuickGO ontologyBLASTP
88274988319544750S ribosomal protein L15QuickGO ontologyBLASTP
8832668845791314preprotein translocase SecYQuickGO ontologyBLASTP
884579885133555adenylate kinaseQuickGO ontologyBLASTP
885325885549225translation initiation factor IF-1QuickGO ontologyBLASTP
88566688577911450S ribosomal protein L36QuickGO ontologyBLASTP
88589388627338130S ribosomal protein S13QuickGO ontologyBLASTP
88632888672339630S ribosomal protein S11QuickGO ontologyBLASTP
887014887961948DNA-directed RNA polymerase alpha subunitQuickGO ontologyBLASTP