Pre_GI: BLASTP Hits

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Query: NC_008148:1859888:1917295 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 1917295, End: 1918029, Length: 735

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013192:305478:305478305478306233756Leptotrichia buccalis DSM 1135, complete genomecobalt transport protein1e-22106
NC_010080:1911932:193783519378351938626792Lactobacillus helveticus DPC 4571, complete genomehypothetical protein5e-1581.6
NC_014393:4482896:448430544843054485111807Clostridium cellulovorans 743B chromosome, complete genomecobalt transport protein4e-1375.1
NC_014960:72737:908929089291761870Anaerolinea thermophila UNI-1, complete genomeputative cobalt ABC transporter permease protein7e-1374.3
NC_014624:3741764:374176437417643742585822Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein3e-1272.4
NC_013198:394000:433309433309434136828Lactobacillus rhamnosus GG, complete genomenickel/cobalt uptake ABC transporter, permease component, NiCoT6e-1271.2
NC_009848:3631243:364348136434813644311831Bacillus pumilus SAFR-032, complete genomecobalt ABC transporter6e-1271.2
NC_014377:112992:144369144369145166798Thermosediminibacter oceani DSM 16646 chromosome, complete genomecobalt transport protein7e-1270.9
NC_015555:327562:369858369858370673816Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeABC-type transporter, integral membrane subunit1e-1170.5
NC_010723:223935:269153269153269956804Clostridium botulinum E3 str. Alaska E43, complete genomecobalt ABC transporter, permease protein3e-1168.6
NC_018665:139646:141318141318142109792Exiguobacterium antarcticum B7 chromosome, complete genomeEnergy-coupling factor transporter transmembrane protein EcfT5e-1168.2
NC_010556:141374:141374141374142165792Exiguobacterium sibiricum 255-15, complete genomecobalt transport protein8e-1167.4
NC_015519:197836:230476230476231270795Tepidanaerobacter sp. Re1 chromosome, complete genomeABC transporter integral membrane subunit3e-1065.9
NC_003030:3251941:325194132519413252744804Clostridium acetobutylicum ATCC 824, complete genomePredicted permease (Cobalt permease subfamily)3e-1065.5
NC_015687:3252233:325356832535683254371804Clostridium acetobutylicum DSM 1731 chromosome, complete genomecobalt subfamily permease3e-1065.5
NC_012673:1540000:155862615586261559417792Exiguobacterium sp. AT1b, complete genomecobalt transport protein8e-1063.9
NC_017295:3250451:325119832511983252001804Clostridium acetobutylicum EA 2018 chromosome, complete genomepermease (Cobalt permease subfamily)9e-1063.9
NC_010001:4486170:448617044861704486982813Clostridium phytofermentans ISDg, complete genomecobalt transport protein2e-0963.2
NC_013161:1801904:182408118240811824956876Cyanothece sp. PCC 8802, complete genomecobalt transport protein1e-0963.2
NC_004557:2711702:272991327299132730710798Clostridium tetani E88, complete genomecobalt transport protein cbiQ5e-0961.6
NC_009698:3553365:356253435625343563337804Clostridium botulinum A str. Hall chromosome, complete genomecobalt ABC transporter permease6e-0961.2
NC_009697:3659834:366542536654253666228804Clostridium botulinum A str. ATCC 19397 chromosome, completecobalt ABC transporter permease6e-0961.2
NC_009495:3688138:368943636894363690239804Clostridium botulinum A str. ATCC 3502 chromosome, complete genomecobalt ABC transporter permease6e-0961.2
NC_012563:3956500:395734539573453958148804Clostridium botulinum A2 str. Kyoto, complete genomecobalt transport permease, CbiQ family6e-0961.2
NC_014171:109280:144324144324145118795Bacillus thuringiensis BMB171 chromosome, complete genomecobalt transport protein CbiQ9e-0960.8
NC_014550:3534000:353982735398273540585759Arthrobacter arilaitensis Re117, complete genomeABC transporter inner membrane subunit8e-0960.8
NC_014246:676570:688815688815689621807Mobiluncus curtisii ATCC 43063 chromosome, complete genomeABC transporter permease8e-0960.8
NC_014011:655266:682097682097682909813Aminobacterium colombiense DSM 12261 chromosome, complete genomecobalt transport protein8e-0960.8
NC_006055:140686:164505164505165503999Mesoplasma florum L1, complete genomecobalt ABC transporter permease component8e-0960.8
NC_012658:3778822:378012037801203780923804Clostridium botulinum Ba4 str. 657 chromosome, complete genomecobalt transport permease8e-0960.8
NC_014829:133305:173406173406174206801Bacillus cellulosilyticus DSM 2522 chromosome, complete genomecobalt transport protein7e-0960.8
NC_014328:4387303:442850344285034429312810Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative cobalt ABC transporter permease1e-0860.5
NC_010520:3788702:379000037900003790803804Clostridium botulinum A3 str. Loch Maree, complete genomecobalt transport permease, CbiQ family1e-0860.1
NC_010516:3759136:376043437604343761237804Clostridium botulinum B1 str. Okra, complete genomecobalt transport permease, CbiQ family1e-0860.1
NC_009699:3790917:379221537922153793018804Clostridium botulinum F str. Langeland chromosome, complete genomecobalt ABC transporter permease1e-0860.1
NC_017297:3787191:379082937908293791632804Clostridium botulinum F str. 230613 chromosome, complete genomecobalt transport permease, CbiQ family1e-0860.1
NC_015958:2251619:227731622773162278122807Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeABC transporter integral membrane subunit2e-0859.3
NC_017208:108134:146372146372147166795Bacillus thuringiensis serovar chinensis CT-43 chromosome, completecobalt transport protein cbiQ2e-0859.3
NC_014410:403776:446058446058446864807Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,cobalt transport protein3e-0858.9
NC_019970:336472:401178401178401984807Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeABC-type cobalt transport system, permease component CbiQ3e-0858.9
NC_014538:1975385:199218719921871992993807Thermoanaerobacter sp. X513 chromosome, complete genomecobalt transport protein3e-0858.9
NC_014964:388458:431069431069431875807Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completecobalt transport protein3e-0858.9
NC_010320:918532:921591921591922397807Thermoanaerobacter sp. X514 chromosome, complete genomecobalt transport protein3e-0858.9
NC_010321:429720:435653435653436459807Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completecobalt transport protein3e-0858.9
NC_011999:198769:219460219460220257798Macrococcus caseolyticus JCSC5402, complete genomecobalt ABC transporter permease protein homolog4e-0858.5
NC_013921:1977444:199413719941371994943807Thermoanaerobacter italicus Ab9 chromosome, complete genomecobalt transport protein6e-0858.2
NC_014964:923681:925414925414926172759Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completecobalt transport protein9e-0857.4
NC_015573:2187688:219501421950142195928915Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeABC transporter integral membrane protein8e-0857.4
NC_014209:1910109:192680819268081927614807Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,cobalt transport protein8e-0857.4
NC_018664:2357882:235708623570862357889804Clostridium acidurici 9a chromosome, complete genomecobalt transporter permease protein CbiQ1e-0757
NC_021182:4557608:455845045584504559250801Clostridium pasteurianum BC1, complete genomeABC-type cobalt transport system, permease component CbiQ2e-0756.6
NC_009089:117980:120122120122120925804Clostridium difficile 630, complete genomeABC transporter, permease protein2e-0756.2
NC_010718:193231:237152237152237949798Natranaerobius thermophilus JW/NM-WN-LF, complete genomecobalt transport protein2e-0756.2
NC_008942:27436:308863088631653768Methanocorpusculum labreanum Z, complete genomehypothetical protein3e-0755.8
NC_017353:825856:847350847350848156807Staphylococcus lugdunensis N920143, complete genomeputative cobalt transport protein3e-0755.5
NC_013893:830282:851776851776852582807Staphylococcus lugdunensis HKU09-01 chromosome, complete genomeTransmembrane component of general energizing module of ECF transporters3e-0755.5
NC_013316:120759:123965123965124672708Clostridium difficile R20291, complete genomeABC transporter, permease protein8e-0754.3
NC_015725:670719:672716672716673621906Mycoplasma bovis Hubei-1 chromosome, complete genomecobalt ABC transporter permease9e-0753.9
NC_004193:119737:158015158015158812798Oceanobacillus iheyensis HTE831, complete genomehypothetical protein1e-0653.9
NC_014751:772912:7779367779367789461011Mycoplasma leachii PG50 chromosome, complete genomecobalt transport protein1e-0653.9
NC_007633:790881:7959027959027969121011Mycoplasma capricolum subsp. capricolum ATCC 27343, completecobalt ABC transporter, permease protein1e-0653.5
NC_007350:692041:714933714933715739807Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,putative ABC-type cobalt transport system permease component2e-0653.1
NC_002976:1844901:184570818457081846514807Staphylococcus epidermidis RP62A, complete genomecobalt transport family protein2e-0652.8
NC_012121:1728913:172972117297211730497777Staphylococcus carnosus subsp. carnosus TM300, complete genomehypothetical protein3e-0652.4
NC_003366:2731995:273388727338872734693807Clostridium perfringens str. 13, complete genomehypothetical protein3e-0652.4
NC_007168:813957:836936836936837742807Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein3e-0652.4
NC_013216:2078444:209876820987682099700933Desulfotomaculum acetoxidans DSM 771, complete genomecobalt transport protein4e-0652
NC_008555:2597980:261230026123002613100801Listeria welshimeri serovar 6b str. SLCC5334, complete genomecobalt transport protein5e-0651.6
NC_008262:2598920:259892025989202599726807Clostridium perfringens SM101, complete genomeABC transporter permease protein6e-0651.2
NC_004461:746284:763053763053763892840Staphylococcus epidermidis ATCC 12228, complete genomehypothetical protein7e-0650.8
NC_016938:136331:155546155546156343798Melissococcus plutonius DAT561 chromosome 1, complete genomecobalt transport family protein9e-0650.4