Pre_GI: BLASTP Hits

Some Help

Query: NC_007958:2370619:2376912 Rhodopseudomonas palustris BisB5, complete genome

Start: 2376912, End: 2381669, Length: 4758

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Four different strains were isolated from 2 sites, one pristine and one polluted. Environmental bacterium with potential use in bioremediation. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011004:2457778:2464559246455924693164758Rhodopseudomonas palustris TIE-1, complete genomeNERD domain protein03085
NC_007925:4355413:4381145438114543861004956Rhodopseudomonas palustris BisB18, complete genomeSuperfamily I DNA and RNA helicases and helicase subunits-like3e-153543
NC_014394:707305:7182267182267231904965Gallionella capsiferriformans ES-2 chromosome, complete genomeNERD domain-containing protein7e-153542
NC_012691:2097287:2102959210295921079294971Tolumonas auensis DSM 9187, complete genomeNERD domain protein6e-128459
NC_016831:2667561:2698569269856927007282160Salmonella enterica subsp. enterica serovar Gallinarum/pullorumNERD domain-containing protein2e-120435
NC_012731:600518:6093686093686143234956Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein4e-118427
NC_007645:7136956:7154626715462671595904965Hahella chejuensis KCTC 2396, complete genomeSuperfamily I DNA and RNA helicase and helicase subunit1e-107392
NC_006370:1810842:1805869180586918108454977Photobacterium profundum SS9 chromosome 1, complete sequencehypothetical protein8e-102373
NC_007949:121747:1311081311081359704863Polaromonas sp. JS666 plasmid 1, complete sequenceSuperfamily I DNA and RNA helicases and helicase subunits-like1e-97358
NC_011000:1397611:1428615142861514334864872Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein2e-94348
NC_006370:1810842:1818063181806318230244962Photobacterium profundum SS9 chromosome 1, complete sequencehypothetical protein3e-72275
NC_012779:346998:3701113701113750724962Edwardsiella ictaluri 93-146, complete genomehypothetical protein7e-71270
NC_012654:237175:2407082407082438603153Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequenceprotein kinase domain protein2e-36155
NC_008312:3923071:3938984393898439439454962Trichodesmium erythraeum IMS101, complete genomeSuperfamily I DNA and RNA helicases and helicase subunits-like7e-33144
NC_016776:1470596:1472902147290214768103909Bacteroides fragilis 638R, complete genomehypothetical protein3e-30135
NC_014228:3505320:350729335072933507757465Xenorhabdus nematophila ATCC 19061, complete genome1e-26123
NC_010002:4572573:4589202458920245925823381Delftia acidovorans SPH-1, complete genomeAAA ATPase1e-25120
NC_010170:4463000:4503816450381645071963381Bordetella petrii, complete genomehypothetical protein1e-25120
NC_014228:3505320:350787435078743508407534Xenorhabdus nematophila ATCC 19061, complete genome6e-26120
NC_009615:1305678:1305678130567813076001923Parabacteroides distasonis ATCC 8503 chromosome, complete genomehelicase2e-25119
NC_015311:403281:4078594078594097781920Prevotella denticola F0289 chromosome, complete genomehypothetical protein5e-25117
NC_015277:3351504:3356971335697133588631893Sphingobacterium sp. 21 chromosome, complete genomeAAA ATPase1e-24116
NC_013410:2691437:2701566270156627047123147Fibrobacter succinogenes subsp. succinogenes S85 chromosome,Superfamily I DNA and RNA helicase and helicase subunits-like protein2e-24115
NC_018939:454000:4649874649874661321146Helicobacter pylori 26695 chromosome, complete genomehypothetical protein2e-23113
NC_000915:453958:4650454650454661271083Helicobacter pylori 26695, complete genomehypothetical protein2e-23112
NC_009953:3509229:3512609351260935154342826Salinispora arenicola CNS-205 chromosome, complete genomeputative helicase2e-23112
NC_017068:1450049:1451482145148214550603579Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein3e-23112
NC_012108:1694817:1696283169628316996063324Desulfobacterium autotrophicum HRM2, complete genomehypothetical protein1e-22110
NC_008757:111292:1320491320491353753327Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completeSuperfamily I DNA and RNA helicases and helicase subunits-like protein1e-22110
NC_010338:2443765:2460853246085324643803528Caulobacter sp. K31, complete genomesuperfamily I DNA or RNA helicase or helicase subunit-like protein2e-22109
NC_017378:986611:99825099825010014803231Helicobacter pylori Puno120 chromosome, complete genomehypothetical protein3e-22108
NC_015711:8964410:8988065898806589915833519Myxococcus fulvus HW-1 chromosome, complete genomeprotein kinase7e-22107
NC_008758:143907:1804521804521843063855Polaromonas naphthalenivorans CJ2 plasmid pPNAP02, completeSuperfamily I DNA and RNA helicases and helicase subunits-like protein1e-21107
NC_014933:3942156:3949999394999939519541956Bacteroides helcogenes P 36-108 chromosome, complete genomehelicase1e-21107
NC_014640:2693060:2701831270183127035911761Achromobacter xylosoxidans A8 chromosome, complete genomesuperfamily I DNA and RNA helicases and helicase subunits-like protein1e-21106
NC_014623:2962330:2976897297689729804153519Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeprotein kinase3e-21105
NC_000961:801902:8181038181038200731971Pyrococcus horikoshii OT3, complete genomeDNA-binding protein1e-20103
NC_007925:4355413:4357953435795343615253573Rhodopseudomonas palustris BisB18, complete genomeSuperfamily I DNA and RNA helicases and helicase subunits-like3e-1895.1
NC_013720:1605240:1630319163031916322381920Pirellula staleyi DSM 6068, complete genomeAAA ATPase6e-1894.7
NC_016887:1949927:1957259195725919609063648Nocardia cyriacigeorgica GUH-2, complete genomehypothetical protein4e-1791.7
NC_006396:320853:3224483224483246732226Haloarcula marismortui ATCC 43049 chromosome I, complete sequenceDNA binding protein eukaryotic-like1e-1690.5
NC_015167:2498666:2505107250510725084333327Cellulophaga lytica DSM 7489 chromosome, complete genomeserine/threonine protein kinase2e-1689.4
NC_008698:903759:9088359088359107241890Thermofilum pendens Hrk 5, complete genomeAAA ATPase7e-1687.4
NC_013849:397947:4060154060154078111797Ferroglobus placidus DSM 10642 chromosome, complete genometype III restriction protein res subunit4e-1585.1
NC_012881:1802000:1810217181021718140533837Desulfovibrio salexigens DSM 2638, complete genomeSuperfamily I DNA and RNA helicase and helicase subunit-like protein4e-1481.6
NC_009939:16437:232342323423998765Deinococcus geothermalis DSM 11300 plasmid pDGEO02, completesuperfamily I DNA/RNA helicase-like protein2e-1379.3
NC_021150:5234000:5242961524296152465993639Azotobacter vinelandii CA6, complete genomeSuperfamily I DNA and RNA helicases and helicase subunits-related protein4e-1378.6
NC_012560:5276000:5285069528506952887073639Azotobacter vinelandii DJ, complete genomeSuperfamily I DNA and RNA helicases and helicase subunits-related protein4e-1378.6
NC_009464:650997:6687456687456719123168Uncultured methanogenic archaeon RC-I, complete genomehypothetical protein9e-1377.4
NC_006512:1722138:1728654172865417313862733Idiomarina loihiensis L2TR, complete genomeSuperfamily I DNA/RNA helicase9e-1377.4
NC_014393:1022843:1022843102284310257462904Clostridium cellulovorans 743B chromosome, complete genomeputative DNA helicase6e-1274.7
NC_013132:782846:7995357995358028703336Chitinophaga pinensis DSM 2588, complete genomesuperfamily I DNA and RNA helicase7e-1274.3
NC_015474:538544:5557295557295596193891Pyrococcus sp. NA2 chromosome, complete genomeDNA helicase related protein6e-1274.3
NC_015954:1437544:1437544143754414403212778Halophilic archaeon DL31 chromosome, complete genomeCRISPR-associated protein Cas44e-1172
NC_011901:1860887:1899181189918119025373357Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein5e-1171.6
NC_014828:1019533:1054517105451710572762760Ethanoligenens harbinense YUAN-3 chromosome, complete genomeDNA helicase8e-1170.9
NC_009142:2480608:2491194249119424949223729Saccharopolyspora erythraea NRRL 2338, complete genomehypothetical protein8e-1170.9
NC_013849:397947:4039154039154057801866Ferroglobus placidus DSM 10642 chromosome, complete genomeAAA ATPase7e-1170.9
NC_016593:1527456:1527456152745615311933738Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeAAA ATPase1e-1070.1
NC_019897:938921:9616169616169645642949Thermobacillus composti KWC4 chromosome, complete genomehypothetical protein2e-1069.3
NC_014298:251783:270902270902271726825Halalkalicoccus jeotgali B3 plasmid 1, complete sequenceDNA binding protein -like protein8e-1067.4
NC_021066:839734:8552138552138599824770Raoultella ornithinolytica B6, complete genomesuperfamily I DNA/RNA helicase8e-1067.4
NC_006510:1446490:1446490144649014502573768Geobacillus kaustophilus HTA426, complete genomehypothetical protein2e-0966.6
NC_013929:7278414:7278414727841472823553942Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein2e-0966.2
NC_017379:996500:100815510081551008685531Helicobacter pylori Puno135 chromosome, complete genomehypothetical protein2e-0965.9
NC_013222:615948:6245196245196278783360Robiginitalea biformata HTCC2501, complete genomehypothetical protein1e-0863.5
NC_010803:634497:6478486478486527404893Chlorobium limicola DSM 245, complete genomesuperfamily I DNA and RNA helicase subunits-like protein2e-0862.8
NC_020210:1275031:1339187133918713428013615Geobacillus sp. GHH01, complete genomeDNA/RNA helicase2e-0862.8
NC_021064:793098:7930987930987949511854Propionibacterium avidum 44067, complete genomehypothetical protein3e-0862.4
NC_014727:1136589:1143692114369211507327041Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,DNA helicase4e-0861.6
NC_017355:997089:100967710096771010057381Helicobacter pylori v225d chromosome, complete genomehypothetical protein5e-0861.6
NC_007969:1095438:1106535110653511100533519Psychrobacter cryohalolentis K5, complete genomehypothetical protein9e-0860.8
NC_017379:996500:1008689100868910113852697Helicobacter pylori Puno135 chromosome, complete genomehypothetical protein1e-0760.1
NC_019974:1280500:128386912838691284354486Natronococcus occultus SP4, complete genome2e-0759.7
NC_016943:3352413:3352413335241333556733261Blastococcus saxobsidens DD2, complete genomehypothetical protein3e-0758.9
NC_011748:4792703:4802695480269548062103516Escherichia coli 55989, complete genomePutative superfamily I DNA helicase4e-0758.5
CU928145:4792703:4802695480269548062103516Escherichia coli 55989 chromosome, complete genomePutative superfamily I DNA helicase4e-0758.5
NC_004741:3041294:3046628304662830501433516Shigella flexneri 2a str. 2457T, complete genomeputative superfamily I DNA helicase4e-0758.5
NC_004337:3049118:3054452305445230579673516Shigella flexneri 2a str. 301, complete genomeputative superfamily I DNA helicase4e-0758.5
NC_017328:3088907:3094241309424130977563516Shigella flexneri 2002017 chromosome, complete genomeputative superfamily I DNA helicase4e-0758.5
NC_017063:775337:7864377864377882481812Helicobacter pylori ELS37 chromosome, complete genomeregulator of nonsense transcripts 15e-0758.2
NC_015137:2582467:2596997259699726036236627Burkholderia sp. CCGE1001 chromosome 2, complete sequenceDNA helicase-like protein7e-0757.8
NC_018581:2768743:2789405278940527953985994Gordonia sp. KTR9 chromosome, complete genomeSuperfamily I DNA and RNA helicase and helicase subunits1e-0657
NC_015164:3099097:3106738310673831109914254Bacteroides salanitronis DSM 18170 chromosome, complete genomehypothetical protein1e-0657
NC_014256:683384:715093715093715953861Helicobacter pylori B8 chromosome, complete genomeregulator of nonsense transcripts 11e-0657
NC_011830:693555:702221702221702907687Desulfitobacterium hafniense DCB-2, complete genome2e-0656.6
NC_013205:1548500:1608001160800116122124212Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,Superfamily I DNA and RNA helicase and helicase subunits-like protein2e-0656.2
NC_014366:3555425:3579027357902735831934167Gamma proteobacterium HdN1, complete genomeProtein kinase2e-0656.2
NC_010552:752007:7597217597217663146594Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceDNA helicase related protein5e-0654.7
NC_018524:4848154:4878663487866348821393477Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomerecB nuclease, TM0106 family domain protein1e-0553.9