Pre_GI: BLASTP Hits

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Query: NC_007952:3196085:3195026 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 3195026, End: 3196231, Length: 1206

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007434:1322500:1349622134962213509381317Burkholderia pseudomallei 1710b chromosome I, complete sequenceTransposase6e-175613
NC_008060:2913671:2927028292702829282901263Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencetransposase IS116/IS110/IS9023e-174611
NC_010084:1299387:1306852130685213080571206Burkholderia multivorans ATCC 17616 chromosome 1, completetransposase IS116/IS110/IS902 family protein7e-172603
NC_010801:550270:5818125818125830171206Burkholderia multivorans ATCC 17616 chromosome 3, completeISBmu10 transposase7e-172603
NC_010087:319063:3418413418413430461206Burkholderia multivorans ATCC 17616 chromosome 3, completetransposase IS116/IS110/IS902 family protein7e-172603
NC_010804:2206000:2216716221671622179211206Burkholderia multivorans ATCC 17616 chromosome 1, completeISBmu10 transposase7e-172603
NC_008253:3941938:3987475398747539886711197Escherichia coli 536, complete genomeputative transposase4e-147521
NC_010660:86445:9314693146943421197Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequencetransposase1e-146520
NC_010658:1772994:1785651178565117868471197Shigella boydii CDC 3083-94, complete genometransposase2e-146518
NC_007607:87000:1224321224321236281197Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceISSfl2 ORF1e-145516
NC_008258:1934479:1935527193552719367231197Shigella flexneri 5 str. 8401, complete genomeISSfl2 ORF4e-145514
NC_008537:12500:1657316573178381266Arthrobacter sp. FB24 plasmid 1, complete sequencetransposase, IS111A/IS1328/IS15334e-129461
NC_015145:3657103:3677666367766636788651200Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genometransposase1e-128459
NC_012803:1302261:1311276131127613125021227Micrococcus luteus NCTC 2665, complete genometransposase3e-117422
NC_014391:4617688:4619787461978746210101224Micromonospora aurantiaca ATCC 27029 chromosome, complete genometransposase IS116/IS110/IS902 family protein1e-107390
NC_009142:2725000:2743012274301227442291218Saccharopolyspora erythraea NRRL 2338, complete genometransposase IS116/IS110/IS902 family protein2e-107389
NC_016111:1904859:1908978190897819102791302Streptomyces cattleya NRRL 8057, complete genomehypothetical protein7e-107387
NC_008271:119957:1199571199571211321176Rhodococcus sp. RHA1 plasmid pRHL3, complete sequenceprobable transposase4e-99362
NC_013929:1584906:1597557159755715987591203Streptomyces scabiei 87.22 chromosome, complete genometransposase1e-96353
NC_003888:7028165:7057809705780970590261218Streptomyces coelicolor A3(2), complete genomeIS110 transposase/integrase1e-94347
NC_003888:8594500:8609130860913086103471218Streptomyces coelicolor A3(2), complete genomeprobable IS110 transposase1e-94347
NC_014218:1163513:1178727117872711799261200Arcanobacterium haemolyticum DSM 20595 chromosome, complete genometransposase IS116/IS110/IS902 family protein7e-95347
NC_013131:3473843:3476181347618134773801200Catenulispora acidiphila DSM 44928, complete genometransposase IS116/IS110/IS902 family protein4e-93342
NC_007164:622000:6289516289516301621212Corynebacterium jeikeium K411, complete genometransposase for IS3510d3e-79296
NC_007951:1928906:194963619496361950214579Burkholderia xenovorans LB400 chromosome 1, complete sequence1e-78293
NC_015673:2206881:2212642221264222138561215Corynebacterium resistens DSM 45100 chromosome, complete genometransposase for insertion sequence element2e-69263
NC_016800:694750:699944699944700891948Corynebacterium diphtheriae BH8 chromosome, complete genometransposase-like protein3e-52206
NC_015673:397947:402560402560403480921Corynebacterium resistens DSM 45100 chromosome, complete genometransposase for insertion sequence element2e-51203
NC_016799:731849:7454017454017466091209Corynebacterium diphtheriae 31A chromosome, complete genometransposase-like protein1e-47190
NC_007164:1839154:1859120185912018603281209Corynebacterium jeikeium K411, complete genometransposase for IS3512c5e-47189
NC_016787:733685:7510667510667522741209Corynebacterium diphtheriae HC03 chromosome, complete genometransposase-like protein6e-47188
NC_015673:525638:5298365298365310441209Corynebacterium resistens DSM 45100 chromosome, complete genometransposase for insertion sequence element2e-46186
NC_007384:1763375:177004517700451770461417Shigella sonnei Ss046, complete genomeISSfl2 ORF4e-43175
NC_016782:152764:164359164359164934576Corynebacterium diphtheriae 241 chromosome, complete genometransposase-like protein9e-38158
NC_009142:5647737:564935756493575649965609Saccharopolyspora erythraea NRRL 2338, complete genomeputative IS110 transposase/integrase1e-37157
NC_016789:1295918:1323662132366213247321071Corynebacterium diphtheriae PW8 chromosome, complete genometransposase-like protein1e-34147
NC_008703:31500:3294732947341521206Mycobacterium sp. KMS plasmid pMKMS01, complete sequencetransposase IS116/IS110/IS902 family protein2e-34146
NC_014811:166389:1674631674631686681206Mycobacterium sp. Spyr1 plasmid pMSPYR101, complete sequencetransposase2e-34146
NC_008703:31500:4552345523467281206Mycobacterium sp. KMS plasmid pMKMS01, complete sequencetransposase IS116/IS110/IS902 family protein2e-34146
NC_016822:1839739:184459618445961845048453Shigella sonnei 53G, complete genomeISSfl2 ORF2e-32140
NC_002944:2373873:2388971238897123901911221Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein2e-31137
NC_002944:1881405:1882374188237418835941221Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein2e-31137
NC_016822:1839739:184756818475681847852285Shigella sonnei 53G, complete genomeISSfl2 ORF4e-31135
NC_007384:1763375:176958217695821769866285Shigella sonnei Ss046, complete genomeISSfl2 ORF4e-31135
NC_008543:2696377:270755627075562707891336Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetransposase IS116/IS110/IS902 family protein5e-30132
NC_008061:2548849:255909725590972559432336Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetransposase IS116/IS110/IS9027e-30132
NC_016111:2952338:2959354295935429605501197Streptomyces cattleya NRRL 8057, complete genomehypothetical protein1e-29130
NC_002944:4163490:4183576418357641847841209Mycobacterium avium subsp. paratuberculosis K-10, complete genomeIS1110 transposase6e-29129
NC_015312:61752:7224072240734421203Pseudonocardia dioxanivorans CB1190 chromosome, complete genometransposase IS116/IS110/IS902 family protein7e-29128
NC_016582:10326938:1033242710332427103336231197Streptomyces bingchenggensis BCW-1 chromosome, complete genomeIS116/IS110/IS902 family transposase1e-28127
NC_006087:2326143:2327614232761423288161203Leifsonia xyli subsp. xyli str. CTCB07, complete genometransposase, undefined3e-28126
NC_013441:2788806:2820958282095828221811224Gordonia bronchialis DSM 43247, complete genometransposase IS111A/IS1328/IS15331e-27124
NC_010612:4654936:4671921467192146731261206Mycobacterium marinum M, complete genometransposase1e-25117
NC_019673:2051363:2139699213969921409161218Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein3e-25116
NC_015145:2693749:2712406271240627136081203Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genometransposase4e-25116
NC_008537:12500:2948329483306761194Arthrobacter sp. FB24 plasmid 1, complete sequencetransposase IS116/IS110/IS902 family protein8e-25115
NC_016789:224697:230652230652231308657Corynebacterium diphtheriae PW8 chromosome, complete genometransposase-like protein7e-24112
NC_016799:731849:747589747589748074486Corynebacterium diphtheriae 31A chromosome, complete genometransposase-like protein2e-23110
NC_014666:1601972:1613788161378816149841197Frankia sp. EuI1c chromosome, complete genometransposase IS116/IS110/IS902 family protein1e-22107
NC_014666:1844882:1861075186107518622711197Frankia sp. EuI1c chromosome, complete genometransposase IS116/IS110/IS902 family protein1e-22107
NC_012586:425615:4426694426694438471179Rhizobium sp. NGR234 plasmid pNGR234b, complete sequenceputative transposase for insertion sequence NGRIS-14a4e-21102
NC_013929:3722867:3749514374951437506591146Streptomyces scabiei 87.22 chromosome, complete genometransposase1e-20100
NC_016789:199503:220068220068220781714Corynebacterium diphtheriae PW8 chromosome, complete genometransposase-like protein2e-20100
NC_015312:1265797:1280848128084812820591212Pseudonocardia dioxanivorans CB1190 chromosome, complete genometransposase IS111A/IS1328/IS15331e-1997.8
NC_010572:802269:816655816655817128474Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative IS element transposase2e-1997.1
NC_016785:161498:181021181021181488468Corynebacterium diphtheriae CDCE 8392 chromosome, complete genometransposase-like protein1e-1894.4
NC_014158:233733:2820262820262832401215Tsukamurella paurometabola DSM 20162 chromosome, complete genometransposase IS116/IS110/IS902 family protein2e-1894
NC_018583:95388:985769857699028453Gordonia sp. KTR9 plasmid pGKT3, complete sequenceTransposase-like protein5e-1892.4
NC_016790:1758000:177147317714731772090618Corynebacterium diphtheriae VA01 chromosome, complete genometransposase-like protein7e-1892
NC_016788:1785287:179910017991001799717618Corynebacterium diphtheriae HC04 chromosome, complete genometransposase-like protein7e-1892
NC_007164:1434305:144673014467301447089360Corynebacterium jeikeium K411, complete genometransposase for IS3510f7e-1892
NC_003155:210240:2435812435812447711191Streptomyces avermitilis MA-4680, complete genomeIS110 family transposase3e-1790.1
NC_012522:7871173:789676878967687897541774Rhodococcus opacus B4, complete genomeputative transposase8e-1788.6
NC_016787:1782951:179752217975221797899378Corynebacterium diphtheriae HC03 chromosome, complete genometransposase-like protein1e-1584.7
NC_016822:1839739:184809118480911848417327Shigella sonnei 53G, complete genomeISSfl2 ORF2e-1584.3
NC_016799:731849:748118748118748507390Corynebacterium diphtheriae 31A chromosome, complete genometransposase-like protein2e-1480.9
NC_016782:152764:163909163909164331423Corynebacterium diphtheriae 241 chromosome, complete genometransposase-like protein3e-1479.7
NC_016802:1815098:183281618328161833145330Corynebacterium diphtheriae HC02 chromosome, complete genometransposase-like protein5e-1479.3
NC_016788:1785287:179959917995991799928330Corynebacterium diphtheriae HC04 chromosome, complete genometransposase-like protein3e-1376.6
NC_016790:1758000:177197217719721772301330Corynebacterium diphtheriae VA01 chromosome, complete genometransposase-like protein3e-1376.6
NC_010718:193231:1932311932311944301200Natranaerobius thermophilus JW/NM-WN-LF, complete genometransposase IS111A/IS1328/IS15332e-1170.5
NC_015573:813000:8374418374418386491209Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genometransposase IS111A/IS1328/IS15334e-1169.3
NC_015573:2187688:2193348219334821945561209Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genometransposase IS111A/IS1328/IS15332e-1067.4
NC_016785:161498:181883181883182143261Corynebacterium diphtheriae CDCE 8392 chromosome, complete genometransposase-like protein4e-1066.2
NC_009254:442360:451923451923452051129Burkholderia vietnamiensis G4 chromosome 3, complete sequence6e-1065.5
NC_014391:6710500:6733615673361567348501236Micromonospora aurantiaca ATCC 27029 chromosome, complete genometransposase IS116/IS110/IS902 family protein5e-0962.8
NC_015312:1191633:1214360121436012155921233Pseudonocardia dioxanivorans CB1190 chromosome, complete genometransposase IS111A/IS1328/IS15331e-0861.2
NC_008253:3122148:312997331299733130362390Escherichia coli 536, complete genomehypothetical protein1e-0861.2
NC_009007:57804:671496714967832684Rhodobacter sphaeroides 2.4.1 plasmid A, partial sequence3e-0860.1
NC_013921:1915377:1935060193506019363431284Thermoanaerobacter italicus Ab9 chromosome, complete genometransposase IS116/IS110/IS902 family protein6e-0858.9
NC_015859:1536439:155599215559921556978987Corynebacterium variabile DSM 44702 chromosome, complete genometransposase for insertion sequence element7e-0858.9
NC_012472:2109719:2126805212680521280401236Bacillus cereus 03BB102, complete genometransposase, IS110 family, OrfB9e-0858.5
NC_016789:199503:219727219727219939213Corynebacterium diphtheriae PW8 chromosome, complete genometransposase-like protein9e-0858.5
NC_017095:1461520:1471194147119414724111218Fervidobacterium pennivorans DSM 9078 chromosome, complete genometransposase1e-0757.8
NC_015958:815442:8154428154428167251284Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genometransposase IS116/IS110/IS902 family protein2e-0757.4
NC_012472:2109719:2119433211943321206681236Bacillus cereus 03BB102, complete genometransposase, IS110 family, OrfB3e-0756.6
NC_014410:989698:1008546100854610098291284Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,transposase IS116/IS110/IS902 family protein4e-0756.2
NC_014314:1485500:150877615087761509729954Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completetransposase IS116/IS110/IS902 family protein4e-0756.2
NC_010718:237962:2437532437532450361284Natranaerobius thermophilus JW/NM-WN-LF, complete genometransposase IS116/IS110/IS902 family protein4e-0756.2
NC_010718:2265447:2270285227028522715681284Natranaerobius thermophilus JW/NM-WN-LF, complete genometransposase IS116/IS110/IS902 family protein4e-0756.2
NC_016582:10159486:102085631020856310209084522Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative transposase4e-0756.2
NC_015589:3241364:326757132675713268419849Desulfotomaculum ruminis DSM 2154 chromosome, complete genome1e-0654.7
NC_007503:2243902:2243902224390222451851284Carboxydothermus hydrogenoformans Z-2901, complete genomeISChy2, transposase2e-0653.5
NC_015312:6398931:6398931639893164001631233Pseudonocardia dioxanivorans CB1190 chromosome, complete genometransposase IS111A/IS1328/IS15339e-0651.6