Pre_GI: BLASTP Hits

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Query: NC_007951:3655088:3676913 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 3676913, End: 3677890, Length: 978

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010170:1580832:159031115903111591288978Bordetella petrii, complete genomeVanillate O-demethylase oxidoreductase2e-177622
NC_012792:385670:408949408949409914966Variovorax paradoxus S110 chromosome 2, complete genomePhthalate 4,5-dioxygenase2e-105382
NC_020209:1949500:197429119742911975250960Pseudomonas poae RE*1-1-14, complete genomeferredoxin3e-86318
NC_010501:3448389:345377834537783454731954Pseudomonas putida W619, complete genomeferredoxin6e-84311
NC_020209:1986503:200595520059552006908954Pseudomonas poae RE*1-1-14, complete genomeferredoxin2e-76286
NC_003296:262118:278338278338279291954Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE VANILLATE O-DEMETHYLASE (VANILLATE DEGRADATION FERREDOXIN-LIKE) OXIDOREDUCTASE PROTEIN1e-72273
NC_011740:810411:819063819063819995933Escherichia fergusonii ATCC 35469, complete genomeVanillate O-demethylase oxidoreductase (Vanillate degradation ferredoxin-like protein)2e-71269
NC_007952:3283394:330230733023073303254948Burkholderia xenovorans LB400 chromosome 2, complete sequenceputative vanillate O-demethylase oxidoreductase6e-70264
NC_007974:2097334:211653021165302117525996Ralstonia metallidurans CH34 chromosome 2, complete sequenceferredoxin9e-70263
NC_012997:1335902:133794813379481338916969Teredinibacter turnerae T7901, complete genomeputative vanillate O-demethylase oxidoreductase2e-66253
NC_013209:2384826:239389423938942394853960Acetobacter pasteurianus IFO 3283-01, complete genomevanillate O-demethylase oxidoreductase subunit4e-62238
NC_017100:2383487:239510123951012396060960Acetobacter pasteurianus IFO 3283-03, complete genomevanillate O-demethylase oxidoreductase subunit4e-62238
NC_017108:2383370:239243823924382393397960Acetobacter pasteurianus IFO 3283-12, complete genomevanillate O-demethylase oxidoreductase subunit4e-62238
NC_017111:2383388:239245623924562393415960Acetobacter pasteurianus IFO 3283-32, complete genomevanillate O-demethylase oxidoreductase subunit4e-62238
NC_017121:2383375:239244323924432393402960Acetobacter pasteurianus IFO 3283-07, complete genomevanillate O-demethylase oxidoreductase subunit4e-62238
NC_017125:2383467:239508123950812396040960Acetobacter pasteurianus IFO 3283-22, complete genomevanillate O-demethylase oxidoreductase subunit4e-62238
NC_017146:2383509:239512323951232396082960Acetobacter pasteurianus IFO 3283-26, complete genomevanillate O-demethylase oxidoreductase subunit4e-62238
NC_017150:2290681:230164023016402302599960Acetobacter pasteurianus IFO 3283-01-42C, complete genomevanillate O-demethylase oxidoreductase subunit4e-62238
NC_015381:1705383:170778417077841708755972Burkholderia gladioli BSR3 chromosome 1, complete sequenceOxidoreductase8e-61234
NC_009255:1071868:107976710797671080735969Burkholderia vietnamiensis G4 chromosome 2, complete sequenceferredoxin7e-59227
NC_010805:530876:538694538694539662969Burkholderia multivorans ATCC 17616 chromosome 2, completeFAD/NAD(P)-binding oxidoreductase7e-59227
NC_010086:1907959:193564219356421936610969Burkholderia multivorans ATCC 17616 chromosome 2, completeferredoxin7e-59227
NC_012856:2931995:295331529533152954277963Ralstonia pickettii 12D chromosome 1, complete genomeferredoxin4e-57222
NC_013446:1648556:167632916763291677291963Comamonas testosteroni CNB-2, complete genomeferredoxin7e-56218
NC_007650:832507:8520958520958544462352Burkholderia thailandensis E264 chromosome II, complete sequencecytochrome P4506e-55214
NC_013446:2062862:207993620799362080631696Comamonas testosteroni CNB-2, complete genomeferredoxin2e-54213
NC_007953:314872:315695315695316645951Burkholderia xenovorans LB400 chromosome 3, complete sequencePutative iron-sulfur oxidoreductase, beta subunit8e-54211
NC_010465:1790739:179195917919591792924966Yersinia pseudotuberculosis YPIII, complete genomeferredoxin3e-53209
NC_012522:2623172:262644726264472627400954Rhodococcus opacus B4, complete genomeoxidoreductase3e-53209
NC_009708:1735903:175894417589441759909966Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeoxidoreductase4e-53208
NC_004088:1851500:187092118709211871886966Yersinia pestis KIM, complete genomediogenase beta subunit4e-53208
NC_005810:2549680:256626825662682567233966Yersinia pestis biovar Microtus str. 91001, complete genomeputative dioxygenase beta subunit4e-53208
NC_009381:2138625:215242121524212153386966Yersinia pestis Pestoides F chromosome, complete genomedioxygenase beta subunit4e-53208
NC_017160:2787637:280841928084192809369951Yersinia pestis D182038 chromosome, complete genomeoxidoreductase FAD/NAD binding/2Fe-2S iron-sulfur cluster binding domain-containing protein4e-53208
NC_017168:2941938:296125729612572962222966Yersinia pestis A1122 chromosome, complete genomeputative dioxygenase subunit beta4e-53208
NC_017265:1571305:159200115920011592966966Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative dioxygenase subunit beta4e-53208
NC_010634:2894631:291118029111802912145966Yersinia pseudotuberculosis PB1/+, complete genomeferredoxin3e-53208
NC_006155:2979500:299324829932482994213966Yersinia pseudotuberculosis IP 32953, complete genomeputative dioxygenase beta subunit3e-53208
NC_016514:1627664:164146416414641642417954Enterobacter cloacae EcWSU1 chromosome, complete genomevanillate O-demethylase oxidoreductase2e-52206
NC_015968:1618862:163413416341341635099966Enterobacter asburiae LF7a chromosome, complete genomeferredoxin1e-50200
NC_014640:3808639:381137438113743812318945Achromobacter xylosoxidans A8 chromosome, complete genomephenoxybenzoate dioxygenase subunit beta 22e-50199
NC_020302:3014483:302435030243503025300951Corynebacterium halotolerans YIM 70093 = DSM 44683, completehypothetical protein3e-49196
NC_007974:2097334:214943221494322150397966Ralstonia metallidurans CH34 chromosome 2, complete sequenceferredoxin3e-49195
NC_009659:997779:100930010093001010232933Janthinobacterium sp. Marseille chromosome, complete genomeferredoxin/oxidoreductase8e-49194
NC_007802:4071006:4071006407100640742153210Jannaschia sp. CCS1, complete genomeReductive dehalogenase9e-49194
NC_009342:2528426:253142325314232532364942Corynebacterium glutamicum R chromosome, complete genomehypothetical protein5e-48191
NC_014010:1850500:189379618937961894755960Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeferredoxin8e-48191
NC_014839:12519:203192031921281963Pantoea sp. At-9b plasmid pPAT9B02, complete sequenceferredoxin8e-48191
NC_014306:3006028:303941730394173040385969Erwinia billingiae Eb661, complete genomevanillate O-demethylase oxidoreductase1e-47190
NC_008043:615049:6183026183026215143213Silicibacter sp. TM1040 mega plasmid, complete sequenceReductive dehalogenase1e-47190
NC_010801:238430:2384302384302407782349Burkholderia multivorans ATCC 17616 chromosome 3, completecytochrome P4503e-47189
NC_017986:331610:372319372319373287969Pseudomonas putida ND6 chromosome, complete genomeferredoxin1e-46187
NC_018581:759932:789577789577790542966Gordonia sp. KTR9 chromosome, complete genomeFlavodoxin reductases (ferredoxin-NADPH reductases) family 14e-45181
NC_013757:2858327:2875240287524028775642325Geodermatophilus obscurus DSM 43160, complete genomeferredoxin2e-44179
NC_017904:1725180:172518017251801726109930Mycobacterium sp. MOTT36Y chromosome, complete genomeoxidoreductase6e-44178
NC_021171:1661923:168394216839421684904963Bacillus sp. 1NLA3E, complete genomevanillate O-demethylase1e-43177
NC_016642:4517478:452257045225704523514945Pseudovibrio sp. FO-BEG1 chromosome, complete genomevanillate O-demethylase oxidoreductase9e-44177
NC_013757:3012130:3027282302728230282831002Geodermatophilus obscurus DSM 43160, complete genomeferredoxin2e-41169
NC_008786:1507139:153306315330631534040978Verminephrobacter eiseniae EF01-2, complete genomeoxidoreductase FAD/NAD(P)-binding domain protein5e-39161
NC_012522:3224526:323170532317053232637933Rhodococcus opacus B4, complete genomeoxidoreductase3e-38159
NC_008268:7180663:718648171864817187458978Rhodococcus sp. RHA1, complete genomepossible oxidoreductase4e-37155
NC_020302:146807:1585171585171595241008Corynebacterium halotolerans YIM 70093 = DSM 44683, completevanillate monooxygenase1e-29130
NC_008343:2050000:205961220596122060361750Granulibacter bethesdensis CGDNIH1, complete genomeflavodoxin reductase family1e-29130
NC_020302:85821:8703287032892482217Corynebacterium halotolerans YIM 70093 = DSM 44683, completecytochrome P450 family protein1e-25117
NC_016906:1565868:157999615799961580943948Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative vanillate O-demethylase oxygenase subunit B2e-25117
NC_015942:2316354:234477523447752345707933Acidithiobacillus ferrivorans SS3 chromosome, complete genomeferredoxin1e-23110
NC_018681:2447871:2447871244787124512213351Nocardia brasiliensis ATCC 700358 chromosome, complete genomemolybdopterin dinucleotide-binding region9e-21101
NC_008786:1507139:1529423152942315304661044Verminephrobacter eiseniae EF01-2, complete genomeoxidoreductase FAD/NAD(P)-binding domain protein1e-20100
NC_015312:4658548:4658548465854846602511704Pseudonocardia dioxanivorans CB1190 chromosome, complete genomenitric oxide dioxygenase1e-1997.8
NC_015733:2581324:2591522259152225926491128Pseudomonas putida S16 chromosome, complete genomeiron-sulfur cluster-binding protein2e-1996.3
NC_015183:2483653:2490745249074524918541110Agrobacterium sp. H13-3 chromosome, complete genomeflavohemoprotein5e-1892
NC_007912:4364215:4371101437110143731252025Saccharophagus degradans 2-40, complete genomeoxidoreductase, FAD-binding3e-1582.8
NC_010681:1234500:1244919124491912470212103Burkholderia phytofirmans PsJN chromosome 1, complete sequenceoxidoreductase FAD/NAD(P)-binding domain protein4e-1582.4
NC_014310:607896:6370226370226381131092Ralstonia solanacearum PSI07 megaplasmid, complete sequencephenylacetic acid degradation protein4e-1582.4
NC_011894:6516856:6529650652965065314101761Methylobacterium nodulans ORS 2060, complete genomeMOSC domain containing protein7e-1478.2
NC_009921:3473854:3499216349921635002411026Frankia sp. EAN1pec, complete genomeOxidoreductase FAD-binding domain protein9e-1477.8
NC_015634:959396:9848139848139859311119Bacillus coagulans 2-6 chromosome, complete genomeOxidoreductase FAD-binding domain-containing protein2e-1376.6
NC_016943:1560000:1569167156916715703481182Blastococcus saxobsidens DD2, complete genomeputative flavodoxin reductase4e-1375.9
NC_018583:95388:1086861086861097591074Gordonia sp. KTR9 plasmid pGKT3, complete sequenceFlavodoxin reductases (ferredoxin-NADPH reductases) family 16e-1375.1
NC_010501:1286971:1308626130862613106562031Pseudomonas putida W619, complete genomepyridoxamine 5'-phosphate oxidase-related FMN-binding7e-1375.1
NC_013892:114884:1260031260031270881086Xenorhabdus bovienii SS-2004 chromosome, complete genomephenylacetic acid degradation protein with NADP-linked, 2Fe-2S ferredoxin-like and riboflavin synthase-like domains8e-1374.7
NC_016510:1874942:1897246189724618983011056Flavobacterium columnare ATCC 49512 chromosome, complete genomephenylacetic acid degradation NADH oxidoreductase PaaE2e-1273.6
NC_003910:4234000:4236340423634042374371098Colwellia psychrerythraea 34H, complete genomeoxidoreductase, FAD/NAD-binding/iron-sulfur cluster binding protein3e-1273.2
NC_004129:5781413:5797817579781757989981182Pseudomonas fluorescens Pf-5, complete genomeflavohemoprotein3e-1273.2
NC_006510:1731939:1763762176376217649971236Geobacillus kaustophilus HTA426, complete genomeflavohemoglobin6e-1271.6
NC_015638:1824794:1828210182821018292831074Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeNitric oxide dioxygenase1e-1171.2
NC_016114:3711000:3723962372396237250231062Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeOxidoreductase FAD-binding domain-containing protein1e-1171.2
NC_011004:1136895:1150461115046111525692109Rhodopseudomonas palustris TIE-1, complete genomeOxidoreductase FAD-binding domain protein8e-1271.2
NC_016887:1714664:1747213174721317482441032Nocardia cyriacigeorgica GUH-2, complete genomeputative oxido-reductase8e-1271.2
NC_020064:3157656:3181421318142131825481128Serratia marcescens FGI94, complete genomeflavodoxin reductase family protein1e-1170.5
NC_016027:123853:1387241387241399441221Gluconacetobacter xylinus NBRC 3288, complete genomeflavohemoprotein8e-1168.2
NC_003888:7866148:7884751788475178859621212Streptomyces coelicolor A3(2), complete genomeflavohemoprotein3e-1066.2
NC_011999:728353:7364357364357375771143Macrococcus caseolyticus JCSC5402, complete genomehypothetical protein9e-1064.7
NC_014228:4408500:4413590441359044147081119Xenorhabdus nematophila ATCC 19061, complete genomeputative phenylacetic acid degradation protein with NADP-linked, 2Fe-2S ferredoxin-like and riboflavin synthase-like domains3e-0962.8
NC_011892:306437:313381313381313776396Methylobacterium nodulans ORS 2060 plasmid pMNOD01, complete8e-0961.6
NC_009725:2784334:2796779279677927979691191Bacillus amyloliquefaciens FZB42, complete genomeHmp9e-0961.2
NC_011758:326366:3584523584523595611110Methylobacterium chloromethanicum CM4 plasmid pMCHL01, completeoxidoreductase FAD/NAD(P)-binding domain protein1e-0860.8
NC_009380:3346132:3357796335779633590101215Salinispora tropica CNB-440 chromosome, complete genomeglobin2e-0860.5
NC_010612:6113155:6118831611883161208522022Mycobacterium marinum M, complete genomeelectron transfer protein FdxB4e-0859.3
NC_020133:5710661:5714114571411457161352022Mycobacterium liflandii 128FXT, complete genomeelectron transfer protein FdxB4e-0858.9
NC_020302:85821:904349043490625192Corynebacterium halotolerans YIM 70093 = DSM 44683, completevanillate O-demethylase7e-0858.5
NC_007777:2964500:2975539297553929765911053Frankia sp. CcI3, complete genomeOxidoreductase FAD-binding region7e-0858.5
NC_010505:4990472:4990472499047249925352064Methylobacterium radiotolerans JCM 2831, complete genomepyridoxamine 5'-phosphate oxidase-related FMN-binding6e-0858.5
NC_014210:3817948:3830952383095238322741323Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,Oxidoreductase FAD-binding domain protein7e-0858.2
NC_012791:721813:7235557235557255612007Variovorax paradoxus S110 chromosome 1, complete genomeoxidoreductase FAD/NAD(P)-binding domain protein9e-0858.2
NC_020302:1241504:1245081124508112461211041Corynebacterium halotolerans YIM 70093 = DSM 44683, completephenol hydroxylase reductase component1e-0757.8
NC_009434:3611738:3644169364416936463612193Pseudomonas stutzeri A1501, complete genomeoxidoreductase, FAD-binding1e-0757.4
NC_013947:1296877:1313733131373313148331101Stackebrandtia nassauensis DSM 44728 chromosome, complete genomephenylacetate-CoA oxygenase/reductase PaaK subunit2e-0757
NC_010002:4073724:4081604408160440826831080Delftia acidovorans SPH-1, complete genomeferredoxin2e-0757
NC_016147:586433:5988755988756008331959Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeoxidoreductase, FAD-binding protein2e-0756.6
NC_007350:2460134:2474782247478224759271146Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,flavohemoprotein5e-0755.5
NC_016642:2573481:2576254257625425773121059Pseudovibrio sp. FO-BEG1 chromosome, complete genomephenylacetate-CoA oxygenase/reductase subunit PaaK6e-0755.5
NC_020054:765511:7700617700617711341074Fibrella aestuarina BUZ 2 drat genomeoxidoreductase FAD/NAD(P)-binding domain protein8e-0754.7
NC_013722:3081459:3085709308570930867851077Xanthomonas albilineans, complete genomeputative oxidoreductase protein1e-0654.7
NC_012988:4387735:4396589439658943978301242Methylobacterium extorquens DM4, complete genomebifunctional nitric oxide dioxygenase/ dihydropteridine reductase1e-0654.3
NC_014550:2091797:2115682211568221174211740Arthrobacter arilaitensis Re117, complete genomeMOSC domain-containing protein1e-0654.3
NC_012808:3897751:3907171390717139083641194Methylobacterium extorquens AM1, complete genomebifunctional nitric oxide dioxygenase (N-terminal); dihydropteridine reductase 2 (C-terminal)1e-0653.9
NC_020302:3014483:3044832304483230459891158Corynebacterium halotolerans YIM 70093 = DSM 44683, completephenylacetic acid degradation NADH oxidoreductase2e-0653.5
NC_015576:4070195:4087180408718040882681089Mycobacterium sp. JDM601 chromosome, complete genomeflavodoxin reductase Hmp3e-0653.1
NC_009077:1027357:1028642102864210298411200Mycobacterium sp. JLS, complete genomeoxidoreductase FAD/NAD(P)-binding domain protein5e-0652.4
NC_012803:361127:3786513786513798351185Micrococcus luteus NCTC 2665, complete genomehemoglobin-like flavoprotein6e-0652
NC_003919:4618988:4656306465630646573821077Xanthomonas axonopodis pv. citri str. 306, complete genomeoxidoreductase7e-0651.6