Pre_GI: BLASTP Hits

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Query: NC_007492:3462929:3499382 Pseudomonas fluorescens PfO-1, complete genome

Start: 3499382, End: 3500011, Length: 630

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014117:2608000:262618526261852626817633Burkholderia sp. CCGE1002 chromosome chromosome 1, completetranscriptional regulator, TetR family8e-101365
NC_010508:1206498:122332512233251223957633Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencetranscriptional regulator, TetR family4e-94343
NC_016002:2453919:247043024704302471047618Pseudogulbenkiania sp. NH8B, complete genomeTetR family transcriptional regulator1e-1686.3
NC_013859:9500:9513951310355843Azospirillum sp. B510 plasmid pAB510e, complete sequencetranscriptional regulator4e-1581.3
NC_010170:4463000:446622944662294466879651Bordetella petrii, complete genometranscriptional regulator, TetR family4e-1374.7
NC_014541:2978500:299438229943822994996615Ferrimonas balearica DSM 9799 chromosome, complete genometranscriptional regulator, TetR family5e-1374.3
NC_013209:2759160:277140327714032772044642Acetobacter pasteurianus IFO 3283-01, complete genometranscriptional regulator TetR7e-1373.9
NC_007951:3631772:364493036449303645616687Burkholderia xenovorans LB400 chromosome 1, complete sequenceTranscriptional regulator, TetR family2e-1272.8
NC_014500:2402881:242317224231722423798627Dickeya dadantii 3937 chromosome, complete genomeputative DNA-binding transcriptional regulatory family of the TetR family4e-1271.2
NC_008700:2788363:280763428076342808254621Shewanella amazonensis SB2B, complete genomeputative transcriptional regulator, TetR family2e-1169.3
NC_016027:1647110:165207416520741652781708Gluconacetobacter xylinus NBRC 3288, complete genometranscriptional regulator3e-1168.6
NC_012912:2426520:243471224347122435335624Dickeya zeae Ech1591, complete genometranscriptional regulator, TetR family7e-1167.4
NC_020410:495184:541048541048541626579Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative transcriptional regulator (TetR/AcrR family)9e-1167
UCMB5137:1:351163511635694579Bacillus atrophaeus UCMB-5137putative transcriptional regulator (TetR/AcrR family)9e-1167
NC_007954:1494291:149868114986811499301621Shewanella denitrificans OS217, complete genomeregulatory protein, TetR1e-1066.2
NC_009092:1504363:152507015250701525681612Shewanella loihica PV-4, complete genometranscriptional regulator, TetR family2e-1066.2
NC_014840:205723:209344209344209985642Pantoea sp. At-9b plasmid pPAT9B03, complete sequencetranscriptional regulator, TetR family3e-1065.5
NC_016894:3935161:395446439544643955075612Acetobacterium woodii DSM 1030 chromosome, complete genometranscriptional regulator TetR family3e-1065.5
NC_008577:1489643:151097015109701511590621Shewanella sp. ANA-3 chromosome 1, complete sequencetranscriptional regulator, TetR family5e-1064.3
NC_010505:5525461:556925755692575569835579Methylobacterium radiotolerans JCM 2831, complete genometranscriptional regulator, TetR family9e-1063.5
NC_014622:653599:671913671913672491579Paenibacillus polymyxa SC2 chromosome, complete genometranscriptional regulator2e-0962.4
NC_011663:1627220:163153716315371632163627Shewanella baltica OS223 chromosome, complete genomeTetR family transcriptional regulator4e-0961.6
NC_010505:5525461:556038455603845561085702Methylobacterium radiotolerans JCM 2831, complete genometranscriptional regulator, TetR family5e-0961.2
NC_014307:2735934:274403527440352744637603Ralstonia solanacearum CFBP2957 chromosome, complete genomeTetR family transcriptional regulator6e-0960.8
NC_010694:1966676:196889219688921969524633Erwinia tasmaniensis, complete genomeTetR-family transcriptional regulator7e-0960.5
NC_008825:1113060:111747611174761118156681Methylibium petroleiphilum PM1, complete genomeputative transcription regulator protein1e-0859.7
NC_017075:1674758:169781216978121698459648Rubrivivax gelatinosus IL144, complete genomeTetR family transcriptional regulator3e-0858.5
NC_016935:3229500:323418232341823234751570Paenibacillus mucilaginosus 3016 chromosome, complete genometranscriptional regulator4e-0858.2
NC_015690:2674187:268368126836812684250570Paenibacillus mucilaginosus KNP414 chromosome, complete genometranscriptional regulator4e-0858.2
NC_015709:1459838:147418514741851474844660Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, completeTetR family transcriptional regulator6e-0857.4
NC_005125:839000:855551855551856189639Gloeobacter violaceus PCC 7421, complete genomeTetR family transcriptional regulatory protein1e-0756.6
NC_010512:734834:736231736231736884654Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencetranscriptional regulator, TetR family2e-0755.8
NC_008062:370902:372299372299372952654Burkholderia cenocepacia AU 1054 chromosome 3, complete sequencetranscriptional regulator, TetR family3e-0755.5
NC_008544:348500:350119350119350772654Burkholderia cenocepacia HI2424 chromosome 3, complete sequencetranscriptional regulator, TetR family3e-0755.5
NC_019697:4108944:412618041261804126779600Chamaesiphon minutus PCC 6605, complete genometranscriptional regulator2e-0755.5
NC_007509:1383013:138503413850341385687654Burkholderia sp. 383 chromosome 3, complete sequencetranscriptional regulator, TetR family3e-0755.1
NC_014246:611275:636808636808637455648Mobiluncus curtisii ATCC 43063 chromosome, complete genomeTetR family transcriptional regulator3e-0755.1
NC_020410:3326944:333221333322133332839627Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeUncharacterized HTH-type transcriptional regulator yvkB6e-0754.3
NC_010506:537833:555196555196555801606Shewanella woodyi ATCC 51908, complete genometranscriptional regulator, TetR family7e-0753.9
NC_009254:23000:259202592026573654Burkholderia vietnamiensis G4 chromosome 3, complete sequenceTetR family transcriptional regulator7e-0753.9
NC_015422:3366500:336988733698873370549663Alicycliphilus denitrificans K601 chromosome, complete genomeTetR family transcriptional regulator8e-0753.5
NC_007794:561623:5764915764915777651275Novosphingobium aromaticivorans DSM 12444, complete genometranscriptional regulator, TetR family2e-0652.8
NC_008595:1349579:136828313682831368876594Mycobacterium avium 104, complete genometranscriptional regulator, TetR family protein2e-0652.8
NC_014814:2588628:263759526375952638245651Mycobacterium sp. Spyr1 chromosome, complete genometranscriptional regulator1e-0652.8
NC_009338:3410349:342183734218373422478642Mycobacterium gilvum PYR-GCK chromosome, complete genomeTetR family transcriptional regulator2e-0652.4
NC_011969:2706000:271071827107182711284567Bacillus cereus Q1 chromosome, complete genomeTetR family transcriptional regulator2e-0652.4
NC_003909:2798622:280198928019892802555567Bacillus cereus ATCC 10987, complete genometranscriptional regulator, TetR family2e-0652.4
NC_017208:2942554:294785329478532948419567Bacillus thuringiensis serovar chinensis CT-43 chromosome, completetranscriptional repressor Bm3R13e-0652
NC_008313:3456741:347227334722733472959687Ralstonia eutropha H16 chromosome 1, complete sequencetranscriptional regulator, TetR/AcrR-family3e-0652
NC_011772:2860000:286563128656312866197567Bacillus cereus G9842, complete genometranscriptional regulator, TetR family3e-0652
NC_014666:1805806:182359318235931824237645Frankia sp. EuI1c chromosome, complete genomeregulatory protein TetR3e-0652
NC_007947:1703326:170922317092231709855633Methylobacillus flagellatus KT, complete genometranscriptional regulator, TetR family3e-0652
NC_007530:2716885:272025427202542720820567Bacillus anthracis str. 'Ames Ancestor', complete genometranscriptional regulator, tetr family4e-0651.6
NC_003997:2715623:272012627201262720692567Bacillus anthracis str. Ames, complete genometranscriptional regulator, TetR family4e-0651.6
NC_005957:2756000:275948827594882760054567Bacillus thuringiensis serovar konkukian str. 97-27, completetranscriptional regulator, TetR family4e-0651.6
NC_008600:2792584:279595427959542796520567Bacillus thuringiensis str. Al Hakam, complete genometranscriptional regulator, TetR family4e-0651.6
NC_006274:2779380:278403727840372784603567Bacillus cereus E33L, complete genometranscriptional regulator, TetR family4e-0651.6
NC_005945:2716000:272058927205892721155567Bacillus anthracis str. Sterne, complete genometranscriptional regulator, TetR family4e-0651.6
NC_014335:2718000:272272727227272723293567Bacillus cereus biovar anthracis str. CI chromosome, completeTetR family transcriptional regulator4e-0651.6
NC_011773:2782465:278583627858362786402567Bacillus cereus AH820 chromosome, complete genomeTetR family transcriptional regulator4e-0651.6
NC_012581:1505276:151787015178701518436567Bacillus anthracis str. CDC 684 chromosome, complete genomeTetR family transcriptional regulator4e-0651.6
NC_012659:2715651:272015427201542720720567Bacillus anthracis str. A0248, complete genomeTetR family transcriptional regulator4e-0651.6
NC_016779:2693790:269716026971602697726567Bacillus cereus F837/76 chromosome, complete genomeregulatory protein TetR4e-0651.6
NC_015554:3964000:397191239719123972580669Alteromonas sp. SN2 chromosome, complete genomeTetR family transcriptional regulator3e-0651.6
NC_014831:866614:875390875390876166777Thermaerobacter marianensis DSM 12885 chromosome, complete genometranscriptional regulator, TetR family3e-0651.6
NC_008228:816000:837355837355837951597Pseudoalteromonas atlantica T6c, complete genometranscriptional regulator, TetR family5e-0651.2
NC_010814:155834:160065160065160667603Geobacter lovleyi SZ, complete genometranscriptional regulator, TetR family8e-0650.4