Pre_GI: BLASTP Hits

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Query: NC_007492:3384077:3403365 Pseudomonas fluorescens PfO-1, complete genome

Start: 3403365, End: 3404378, Length: 1014

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004129:4434259:4457614445761444586271014Pseudomonas fluorescens Pf-5, complete genomebenzoate 1,2-dioxygenase ferredoxin reductase subunit4e-154544
NC_017506:1100679:1134588113458811356041017Marinobacter adhaerens HP15 chromosome, complete genomeoxidoreductase FAD/NAD(P)-binding domain-containing protein4e-107387
NC_010512:110932:1284481284481294701023Burkholderia cenocepacia MC0-3 chromosome 3, complete sequenceoxidoreductase FAD/NAD(P)-binding domain protein3e-101369
NC_014098:1553900:1563582156358215646131032Bacillus tusciae DSM 2912 chromosome, complete genomeOxidoreductase FAD-binding domain protein5e-38158
NC_007777:2964500:2975539297553929765911053Frankia sp. CcI3, complete genomeOxidoreductase FAD-binding region2e-35149
NC_008782:3252092:326003732600373261023987Acidovorax sp. JS42, complete genomeOxidoreductase FAD-binding domain protein2e-32139
NC_014118:987889:1010611101061110116391029Burkholderia sp. CCGE1002 chromosome chromosome 2, completeOxidoreductase FAD-binding domain protein8e-31134
NC_007973:1411714:1438990143899014400541065Ralstonia metallidurans CH34 chromosome 1, complete sequenceOxidoreductase FAD-binding region3e-29129
NC_008752:166877:183480183480184475996Acidovorax avenae subsp. citrulli AAC00-1, complete genomeOxidoreductase FAD-binding domain protein6e-29128
NC_015138:201323:212885212885213880996Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeferredoxin--NAD(+) reductase7e-29128
NC_014910:3727887:3756671375667137585991929Alicycliphilus denitrificans BC chromosome, complete genomeoxidoreductase fad-binding domain protein1e-28127
NC_015312:681678:6897476897476908021056Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeferredoxin--NAD(+) reductase1e-28127
NC_005244:37546:543425434255328987Pseudomonas sp. ND6 plasmid pND6-1, complete sequencenaphthalene dioxygenase reductase2e-28127
NC_009485:1648896:166749616674961668494999Bradyrhizobium sp. BTAi1 chromosome, complete genomeferredoxin NAD(+) reductase4e-28125
NC_010162:2469915:2491850249185024929441095Sorangium cellulosum 'So ce 56', complete genomeoxidoreductase1e-27124
NC_015850:1947000:196577919657791966765987Acidithiobacillus caldus SM-1 chromosome, complete genomeCDP-6-deoxy-delta-3,4-glucoseen reductase1e-27123
NC_011206:1293880:1307435130743513085171083Acidithiobacillus ferrooxidans ATCC 53993, complete genomeoxidoreductase FAD/NAD(P)-binding domain protein1e-27123
NC_011761:1412420:1425617142561714266451029Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeferredoxin/oxidoreductase, FAD/NAD-binding2e-27123
NC_009512:3282500:3292791329279132938401050Pseudomonas putida F1, complete genomeOxidoreductase FAD-binding domain protein5e-27122
NC_018581:32092:4895448954499791026Gordonia sp. KTR9 chromosome, complete genome2-polyprenylphenol hydroxylase-related flavodoxin oxidoreductase6e-27121
NC_016147:730810:7433777433777444411065Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeFadD27 protein2e-26119
NC_012724:3222415:3239330323933032403611032Burkholderia glumae BGR1 chromosome 1, complete genomeOxidoreductase FAD/NAD(P)-binding domain protein2e-26119
NC_016604:2944555:2956768295676829577991032Mycobacterium rhodesiae NBB3 chromosome, complete genomeflavodoxin reductase family protein3e-26119
NC_009708:3411153:343657134365713437560990Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeCDP-6-deoxy-delta-3,4-glucoseen reductase3e-26119
NC_010634:1175404:118092811809281181917990Yersinia pseudotuberculosis PB1/+, complete genomeoxidoreductase FAD/NAD(P)-binding subunit3e-26119
NC_006155:1191307:119886311988631199852990Yersinia pseudotuberculosis IP 32953, complete genomeCDP-6-deoxy-delta-3,4-glucoseen reductase3e-26119
NC_008150:2878450:290405629040562905045990Yersinia pestis Antiqua, complete genomecdp-6-deoxy-delta-3,4-glucoseen reductase2e-26119
NC_005810:872672:880228880228881217990Yersinia pestis biovar Microtus str. 91001, complete genomeCDP-6-deoxy-delta-3,4-glucoseen reductase2e-26119
NC_010465:3465351:349080134908013491790990Yersinia pseudotuberculosis YPIII, complete genomeoxidoreductase FAD/NAD(P)-binding domain protein2e-26119
NC_017168:2281040:228859622885962289585990Yersinia pestis A1122 chromosome, complete genomeCDP-6-deoxy-delta-3,4-glucoseen reductase2e-26119
NC_014029:3501500:352678835267883527777990Yersinia pestis Z176003 chromosome, complete genomeCDP-6-deoxy-delta-3,4-glucoseen reductase2e-26119
NC_009381:3094939:312052731205273121516990Yersinia pestis Pestoides F chromosome, complete genomeCDP-6-deoxy-delta-3,4-glucoseen reductase2e-26119
NC_008149:1122693:113024911302491131238990Yersinia pestis Nepal516, complete genomecdp-6-deoxy-delta-3,4-glucoseen reductase2e-26119
NC_010159:3033989:304154530415453042534990Yersinia pestis Angola, complete genomeCDP-6-deoxy-delta-3,4-glucoseen reductase2e-26119
NC_004088:1196875:120239912023991203388990Yersinia pestis KIM, complete genomeCDP-6-deoxy-delta-3,4-glucoseen reductase2e-26119
NC_008781:2611702:262632026263202627306987Polaromonas naphthalenivorans CJ2, complete genomeOxidoreductase FAD-binding domain protein7e-26118
NC_008697:118859:1301211301211311611041Nocardioides sp. JS614 plasmid pNOCA01, complete sequenceoxidoreductase FAD/NAD(P)-binding domain protein5e-25115
NC_014641:20103:399493994940935987Achromobacter xylosoxidans A8 plasmid pA81, complete sequencenaphthalene 1,2-dioxygenase system ferredoxin--NAD(+) reductase component7e-24111
NC_015379:2505233:2514184251418425152241041Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative oxidoreductase2e-22106
NC_015633:413587:437675437675438646972Vibrio anguillarum 775 chromosome chromosome I, complete sequencePhenol hydroxylase P5 protein4e-21102
NC_020302:1241504:1245081124508112461211041Corynebacterium halotolerans YIM 70093 = DSM 44683, completephenol hydroxylase reductase component6e-2098.6
NC_002928:507749:5492345492345502921059Bordetella parapertussis 12822, complete genomeoxidoreductase1e-1997.4
NC_015677:3339181:3362799336279933638811083Ramlibacter tataouinensis TTB310 chromosome, complete genomeFerredoxin--NAD(+) reductase2e-1996.7
NC_002927:506183:5505745505745516321059Bordetella bronchiseptica RB50, complete genomeoxidoreductase3e-1995.9
NC_008712:250240:263677263677264657981Arthrobacter aurescens TC1 plasmid TC1, complete sequenceCDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase4e-1995.9
NC_007973:1411714:1426985142698514280071023Ralstonia metallidurans CH34 chromosome 1, complete sequenceOxidoreductase FAD-binding region1e-1894
NC_015563:1951368:1958163195816319592151053Delftia sp. Cs1-4 chromosome, complete genomeferredoxin--NAD(+) reductase2e-1893.6
NC_004129:5846415:585417858541785855167990Pseudomonas fluorescens Pf-5, complete genomeCDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase4e-1892.4
NC_004547:1600900:161349816134981614457960Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeCDP-6-deoxy-delta-3,4-glucoseen reductase8e-1891.7
NC_011094:2172271:219568121956812196655975Salmonella enterica subsp. enterica serovar Schwarzengrund strCDP-6-deoxy-delta-3,4-glucoseen reductase9e-1891.3
NC_012522:5847699:5856594585659458576311038Rhodococcus opacus B4, complete genomeputative phenol hydroxylase reductase component1e-1790.9
NC_011080:2161696:218557821855782186552975Salmonella enterica subsp. enterica serovar Newport str. SL254,1e-1790.9
NC_011149:2110861:213200421320042132978975Salmonella enterica subsp. enterica serovar Agona str. SL483,CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase2e-1790.5
NC_010102:861860:870687870687871679993Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-1790.1
NC_011205:2283438:230579123057912306765975Salmonella enterica subsp. enterica serovar Dublin str. CT_020218532e-1790.1
NC_002929:52500:6448964489655501062Bordetella pertussis Tohama I, complete genomeoxidoreductase2e-1790.1
NC_017223:51180:6448964489655501062Bordetella pertussis CS chromosome, complete genomeoxidoreductase2e-1790.1
NC_006511:854785:863531863531864505975Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCCDP-6-deoxy-delta-3,4-glucoseen reductase2e-1790.1
NC_011147:854730:863476863476864450975Salmonella enterica subsp. enterica serovar Paratyphi A strCDP-6-deoxy-delta-3,4-glucoseen reductase2e-1790.1
NC_011274:2147427:216978221697822170756975Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91CDP-6-deoxy-delta-3,4-glucoseen reductase2e-1790.1
NC_011294:2156425:217877421787742179748975Salmonella enterica subsp. enterica serovar Enteritidis strCDP-6-deoxy-delta-3,4-glucoseen reductase2e-1790.1
NC_016831:854973:863800863800864774975Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative reductase RfbI2e-1790.1
NC_008825:846916:8597548597548607731020Methylibium petroleiphilum PM1, complete genometoluene monooxygenase oxidoreductase3e-1789.7
NC_011892:77975:1063391063391074451107Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completeOxidoreductase FAD-binding domain protein2e-1789.7
NC_011083:2200613:222173922217392222731993Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase6e-1788.6
NC_003197:2152994:217412021741202175112993Salmonella typhimurium LT2, complete genomeCDP-6-deoxy-delta-3,4-glucoseen reductase6e-1788.6
NC_016810:2150709:217183521718352172827993Salmonella enterica subsp. enterica serovar Typhimurium strputative reductase RfbI6e-1788.6
NC_016856:2204546:222567222256722226664993Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SCDP-6-deoxy-delta-3,4-glucoseen reductase6e-1788.6
NC_016857:2150709:217183521718352172827993Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74CDP-6-deoxy-delta-3,4-glucoseen reductase6e-1788.6
NC_016860:2148535:216966121696612170653993Salmonella enterica subsp. enterica serovar Typhimurium strCDP-6-deoxy-delta-3,4-glucoseen reductase6e-1788.6
NC_016863:2152739:217386521738652174857993Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1CDP-6-deoxy-delta-3,4-glucoseen reductase6e-1788.6
NC_017046:2150072:217119821711982172190993Salmonella enterica subsp. enterica serovar Typhimurium str. 798reductase RfbI6e-1788.6
NC_004631:862002:870827870827871801975Salmonella enterica subsp. enterica serovar Typhi Ty2, completeCDP-6-deoxy-delta-3,4-glucoseen reductase5e-1788.6
NC_003198:2109775:213212721321272133101975Salmonella enterica subsp. enterica serovar Typhi str. CT18,CDP-6-deoxy-delta-3,4-glucoseen reductase5e-1788.6
NC_016832:861956:870781870781871755975Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein5e-1788.6
NC_010376:1175916:1189934118993411910491116Finegoldia magna ATCC 29328, complete genomesodium-translocating NADH-quinone reductase subunit F1e-1687.4
NC_010623:1961685:1989181198918119905601380Burkholderia phymatum STM815 chromosome 2, complete sequenceoxidoreductase FAD/NAD(P)-binding domain protein1e-1584
NC_015458:2614108:2623981262398126250211041Pusillimonas sp. T7-7 chromosome, complete genomeCDP-6-deoxy-delta-3,4-glucoseen reductase3e-1582.8
NC_016147:730810:7372907372907383511062Pseudoxanthomonas spadix BD-a59 chromosome, complete genometoluene monooxygenase oxidoreductase3e-1582.8
NC_013446:1648556:1692210169221016932201011Comamonas testosteroni CNB-2, complete genomereductase component of terephthalate 1,2-dioxygenase7e-1581.6
NC_015727:1357095:1379549137954913805921044Cupriavidus necator N-1 plasmid BB1p, complete sequenceCDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase AscD1e-1481.3
NC_009485:7827782:784468278446827845560879Bradyrhizobium sp. BTAi1 chromosome, complete genomeferredoxin6e-1478.6
NC_018697:505915:513902513902514657756Cycloclasticus sp. P1 chromosome, complete genomeNADH:ubiquinone oxidoreductase, na translocating, f subunit3e-1272.8
NC_014910:2779573:2797824279782427989121089Alicycliphilus denitrificans BC chromosome, complete genomeoxidoreductase fad-binding domain protein9e-1271.2
NC_010723:622928:6263066263066274601155Clostridium botulinum E3 str. Alaska E43, complete genomeputative oxidoreductase2e-1170.5
NC_004129:5781413:5797817579781757989981182Pseudomonas fluorescens Pf-5, complete genomeflavohemoprotein7e-1168.6
NC_010674:658596:6611006611006622541155Clostridium botulinum B str. Eklund 17B, complete genomeputative oxidoreductase1e-1067.4
NC_013892:114884:1260031260031270881086Xenorhabdus bovienii SS-2004 chromosome, complete genomephenylacetic acid degradation protein with NADP-linked, 2Fe-2S ferredoxin-like and riboflavin synthase-like domains1e-1067.4
NC_020302:3014483:3044832304483230459891158Corynebacterium halotolerans YIM 70093 = DSM 44683, completephenylacetic acid degradation NADH oxidoreductase2e-1067
NC_009921:3473854:3499216349921635002411026Frankia sp. EAN1pec, complete genomeOxidoreductase FAD-binding domain protein2e-1066.6
NC_010610:1178430:119667411966741197465792Lactobacillus fermentum IFO 3956, complete genomehypothetical protein3e-1066.2
NC_003888:56225:8533685336866431308Streptomyces coelicolor A3(2), complete genomeflavohemoprotein3e-1066.2
NC_010336:564958:586803586803587531729Francisella philomiragia subsp. philomiragia ATCC 25017, completephenol 2-monooxygenase5e-1065.9
NC_011004:1136895:1150461115046111525692109Rhodopseudomonas palustris TIE-1, complete genomeOxidoreductase FAD-binding domain protein6e-1065.5
NC_007516:1947214:196700119670011967300300Synechococcus sp. CC9605, complete genomeFerredoxin (2Fe-2S)9e-1064.7
NC_003888:7866148:7884751788475178859621212Streptomyces coelicolor A3(2), complete genomeflavohemoprotein1e-0964.3
NC_017265:3240379:326597632659763266602627Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,Na+-translocating NADH-quinone reductase subunit F2e-0963.5
NC_014228:4408500:4413590441359044147081119Xenorhabdus nematophila ATCC 19061, complete genomeputative phenylacetic acid degradation protein with NADP-linked, 2Fe-2S ferredoxin-like and riboflavin synthase-like domains2e-0963.5
NC_011961:891815:9027379027379037441008Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequencexylene monooxygenase electron transfer subunit3e-0963.2
NC_011894:5787990:5797977579797757992031227Methylobacterium nodulans ORS 2060, complete genomeoxidoreductase FAD/NAD(P)-binding domain protein4e-0962.8
NC_016147:586433:5988755988756008331959Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeoxidoreductase, FAD-binding protein7e-0962
NC_009052:1394000:1398381139838113996011221Shewanella baltica OS155, complete genomeOxidoreductase FAD-binding domain protein9e-0961.2
NC_017267:4232771:425158342515834252305723Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completephenol hydroxylase1e-0860.8
NC_010511:6067000:608952060895206090293774Methylobacterium sp. 4-46 chromosome, complete genome2e-0860.5
NC_018531:3679978:3695648369564836968531206Arthrobacter sp. Rue61a chromosome, complete genomering 1,2-phenylacetyl-CoA epoxidase component3e-0859.7
NC_016901:1527877:1532763153276315339291167Shewanella baltica OS678 chromosome, complete genomeOxidoreductase FAD-binding domain-containing protein3e-0859.3
NC_008711:3520515:3540886354088635420911206Arthrobacter aurescens TC1, complete genomephenylacetate-CoA oxygenase/reductase, PaaK subunit6e-0858.5
NC_016510:1874942:1897246189724618983011056Flavobacterium columnare ATCC 49512 chromosome, complete genomephenylacetic acid degradation NADH oxidoreductase PaaE1e-0757.8
NC_009434:3611738:3644169364416936463612193Pseudomonas stutzeri A1501, complete genomeoxidoreductase, FAD-binding1e-0757.8
NC_004113:1026886:103410910341091034405297Thermosynechococcus elongatus BP-1, complete genomeferredoxin I1e-0757.4
NC_007005:321695:323173323173324141969Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein2e-0757.4
NC_006510:1731939:1763762176376217649971236Geobacillus kaustophilus HTA426, complete genomeflavohemoglobin2e-0757.4
NC_015634:959396:9848139848139859311119Bacillus coagulans 2-6 chromosome, complete genomeOxidoreductase FAD-binding domain-containing protein2e-0757
NC_017265:3240379:326665032666503266964315Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,CDP-6-deoxy-delta-3,4-glucoseen reductase3e-0756.6
NC_012988:4387735:4396589439658943978301242Methylobacterium extorquens DM4, complete genomebifunctional nitric oxide dioxygenase/ dihydropteridine reductase3e-0756.6
NC_012808:3897751:3907171390717139083641194Methylobacterium extorquens AM1, complete genomebifunctional nitric oxide dioxygenase (N-terminal); dihydropteridine reductase 2 (C-terminal)2e-0756.6
NC_015312:4658548:4658548465854846602511704Pseudonocardia dioxanivorans CB1190 chromosome, complete genomenitric oxide dioxygenase5e-0755.5
NC_020063:3690308:3752413375241337536361224Enterobacteriaceae bacterium strain FGI 57, complete genomeNADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit5e-0755.5
NC_011758:326366:3584523584523595611110Methylobacterium chloromethanicum CM4 plasmid pMCHL01, completeoxidoreductase FAD/NAD(P)-binding domain protein5e-0755.5
NC_013939:1927424:1935316193531619365391224Deferribacter desulfuricans SSM1, complete genomeNa(+)-translocating NADH-quinone reductase subunit F6e-0755.1
NC_020133:5710661:5714114571411457161352022Mycobacterium liflandii 128FXT, complete genomeelectron transfer protein FdxB9e-0754.7
NC_010612:6113155:6118831611883161208522022Mycobacterium marinum M, complete genomeelectron transfer protein FdxB1e-0654.7
NC_015703:5865921:5892667589266758944781812Runella slithyformis DSM 19594 chromosome, complete genomefatty acid hydroxylase1e-0654.3
NC_014310:607896:6370226370226381131092Ralstonia solanacearum PSI07 megaplasmid, complete sequencephenylacetic acid degradation protein1e-0654.3
NC_020164:1784223:1799493179949318006381146Staphylococcus warneri SG1, complete genomehypothetical protein2e-0653.9
NC_016642:2573481:2576254257625425773121059Pseudovibrio sp. FO-BEG1 chromosome, complete genomephenylacetate-CoA oxygenase/reductase subunit PaaK2e-0653.5
NC_015638:1824794:1828210182821018292831074Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeNitric oxide dioxygenase2e-0653.5
NC_013791:1323903:1323903132390313251261224Bacillus pseudofirmus OF4 chromosome, complete genomenitric oxide dioxygenase2e-0653.5
NC_012997:1335902:133794813379481338916969Teredinibacter turnerae T7901, complete genomeputative vanillate O-demethylase oxidoreductase8e-0651.6