Pre_GI Gene

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Host: NC_005244 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_005244:37546 Pseudomonas sp. ND6 plasmid pND6-1, complete sequence

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. In the latter form the single cell can display an extremely high motility due to its polar flagella. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Typically they are plant pathogens, although several strains are pathogenic to humans. These bacteria share a high degree of homology to Pseudomonas aeruginosa strains. However, key virulence factors like certain exotoxin genes and type III secretion systems are absent, which makes these bacteria non-pathogenic in nature. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
3713337573441hypothetical proteinBLASTP
3754638022477hypothetical protein
3811738473357hypothetical proteinBLASTP
3866639433768hypothetical protein
3945239790339putative DNA or RNA helicasesQuickGO ontologyBLASTP
4062341384762hypothetical proteinBLASTP
4133841625288hypothetical proteinBLASTP
4169242468777peptidaseQuickGO ontologyBLASTP
4325543608354hypothetical protein
4408244531450hypothetical proteinBLASTP
4488645161276hypothetical proteinBLASTP
45547473161770putative DNA modification methylaseQuickGO ontologyBLASTP
4781548534720hypothetical proteinBLASTP
48696498441149Lin2600 dehydrogenaseQuickGO ontologyBLASTP
50964522231260AGR-L-2007p integraseQuickGO ontologyBLASTP
5227352818546hypothetical protein
5321354172960ATP-dependent DNA ligaseQuickGO ontologyBLASTP
5434255328987naphthalene dioxygenase reductaseQuickGO ontologyBLASTP
5547255786315naphthalene dioxygenase ferredoxinQuickGO ontologyBLASTP
55857572061350naphthalene dioxygenase Fe-S protein large subunitQuickGO ontologyBLASTP
5722157805585naphthalene dioxygenase Fe-S protein small subunitQuickGO ontologyBLASTP
578265865382823-dihydroxy-23-dihydrophenylpropionate dehydrogenaseQuickGO ontologyBLASTP
58700601511452salicylaldehyde dehydrogenaseQuickGO ontologyBLASTP