Pre_GI: BLASTP Hits

Some Help

Query: NC_007348:2011957:2029244 Ralstonia eutropha JMP134 chromosome 2, complete sequence

Start: 2029244, End: 2030818, Length: 1575

Host Lineage: Cupriavidus pinatubonensis; Cupriavidus; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism is found in both soil and water and has great potential for use in bioremediation as it is capable of degrading a large list of pollutants including chlorinated aromatic compounds. The bacterium can utilize hydrogen, carbon dioxide, as well as organic compounds for growth and is a model organism for hydrogen oxidation as it can grow on hydrogen as the sole energy source. It was originally isolated due to its ability to degrade the herbicide 2,4-dichlorophenoxyacetic acid, which is due to the degradative functions being encoded on a plasmid (pJP4). Metabolically versatile bacterium. Cupriavidus necator also known as Ralstonia eutropha is a soil bacterium with diverse metabolic abilities. Strains of this organism are resistant to high levels of copper or are able to degrade chloroaromatic compounds such as halobenzoates and nitrophenols making them useful for bioremediation.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012721:1395417:1397244139724413988301587Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein2e-128459
NC_014118:1171411:1171411117141111729971587Burkholderia sp. CCGE1002 chromosome chromosome 2, completetype VI secretion-associated protein, VC_A0119 family1e-127456
NC_010552:592154:6109656109656125481584Burkholderia ambifaria MC40-6 chromosome 2, complete sequencetype VI secretion-associated protein, VC_A0119 family6e-127454
NC_012962:4427000:4435406443540644370071602Photorhabdus asymbiotica, complete genomehypothetical protein2e-105383
NC_010501:3575726:3578580357858035801661587Pseudomonas putida W619, complete genometype VI secretion-associated protein, VC_A0119 family3e-100365
NC_017060:125480:1543521543521559561605Rahnella aquatilis HX2 plasmid PRA1, complete sequencetype VI secretion-associated protein8e-100364
NC_010465:2820500:2845578284557828471791602Yersinia pseudotuberculosis YPIII, complete genometype VI secretion-associated protein, VC_A0119 family3e-97356
NC_009381:1682000:1682016168201616836171602Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein5e-97355
NC_009708:2788855:2815051281505128166521602Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeImpA domain-containing protein1e-96353
NC_008563:3119284:3139452313945231410891638Escherichia coli APEC O1, complete genomehypothetical protein2e-95350
NC_009648:1487692:1508599150859915101971599Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein3e-87323
NC_014121:1822895:1838342183834218399401599Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completetype VI secretion system protein VasJ8e-87321
NC_012731:2302974:2321926232192623235241599Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein2e-86320
NC_013956:4579759:4578161457816145797621602Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein9e-85314
NC_016612:28451:5557555575571491575Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein6e-84311
NC_014837:3766426:3790283379028337918601578Pantoea sp. At-9b chromosome, complete genometype VI secretion-associated protein5e-83308
NC_009436:3117661:3152243315224331546182376Enterobacter sp. 638, complete genomeImpA domain-containing protein9e-34145
NC_007517:306508:3065083065083088802373Geobacter metallireducens GS-15, complete genomeImpA-like2e-23110
NC_016612:5600177:560294756029475603309363Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein3e-1894
NC_009656:3733913:3744965374496537465211557Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein9e-1685.5
NC_011205:1186097:1211580121158012129921413Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853ImpA domain-containing protein3e-0963.9
NC_011274:1094379:1119872111987211211671296Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein3e-0963.5
NC_005126:349658:3859733859733874061434Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein5e-0963.2
NC_011149:1077589:1098898109889811003101413Salmonella enterica subsp. enterica serovar Agona str. SL483,type VI secretion-associated protein, family8e-0962.4
NC_012962:293976:3057363057363070461311Photorhabdus asymbiotica, complete genomehypothetical protein1e-0862
NC_008740:4109000:4129370412937041308181449Marinobacter aquaeolei VT8, complete genomeImpA domain protein1e-0862
NC_015968:4117835:4139595413959541409951401Enterobacter asburiae LF7a chromosome, complete genometype VI secretion-associated protein3e-0860.5
NC_016831:1905289:1908761190876119101551395Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein4e-0860.1
NC_011294:1085447:1106007110600711073981392Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein4e-0860.1
NC_011274:1094379:1114918111491811165491632Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein5e-0859.7
NC_011205:1186097:1206665120666512080291365Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853ImpA domain-containing protein5e-0859.7
NC_011149:1077589:1093986109398610953471362Salmonella enterica subsp. enterica serovar Agona str. SL483,ImpA domain protein6e-0859.7
NC_016822:246715:2578312578312592431413Shigella sonnei 53G, complete genomehypothetical protein9e-0858.9
NC_016902:3863932:3864680386468038660921413Escherichia coli KO11FL chromosome, complete genometype VI secretion-associated protein1e-0758.5
CP002516:3863932:3864680386468038660921413Escherichia coli KO11, complete genometype VI secretion-associated protein, VC_A0119 family1e-0758.5
CP002185:234719:2458112458112472231413Escherichia coli W, complete genomeImpA domain-containing protein1e-0758.5
NC_013892:274297:2834992834992849351437Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein4e-0756.6
NC_014323:816027:8303448303448314711128Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein8e-0755.8
NC_010634:4234932:4245199424519942465121314Yersinia pseudotuberculosis PB1/+, complete genomeImpA domain-containing protein8e-0755.8
NC_014228:4331327:4341899434189943433411443Xenorhabdus nematophila ATCC 19061, complete genomeConserved hypothetical protein with ImpA domain(probable component of SST VI cluster)8e-0755.8
NC_003143:4006884:401604840160484016830783Yersinia pestis CO92, complete genomehypothetical protein7e-0755.8
NC_014029:3958811:396797539679753968757783Yersinia pestis Z176003 chromosome, complete genomehypothetical protein7e-0755.8
NC_017154:3898925:390808939080893908871783Yersinia pestis D106004 chromosome, complete genomehypothetical protein7e-0755.8
NC_017168:1631052:164021616402161640998783Yersinia pestis A1122 chromosome, complete genomehypothetical protein7e-0755.8
NC_010634:4234932:4250202425020242515901389Yersinia pseudotuberculosis PB1/+, complete genometype VI secretion-associated protein1e-0655.5
NC_009648:3476000:349049334904933490885393Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein1e-0655.5
NC_003143:4006884:4010961401096140123581398Yersinia pestis CO92, complete genomehypothetical protein1e-0655.5
NC_011740:1991941:2008972200897220104771506Escherichia fergusonii ATCC 35469, complete genomehypothetical protein1e-0655.5
NC_009381:222735:231890231890232672783Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein1e-0655.5
NC_017265:4265659:427741042774104278192783Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein1e-0655.5
NC_010465:429095:4382594382594395661308Yersinia pseudotuberculosis YPIII, complete genomeImpA domain protein1e-0655.5
NC_006155:4302826:4319105431910543204931389Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein1e-0655.5
NC_009381:222735:2268122268122282001389Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein1e-0655.5
NC_009708:372422:3816133816133829261314Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeImpA domain-containing protein9e-0755.5
NC_006155:4302826:4314102431410243154151314Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein9e-0755.5
NC_017265:4265659:4281882428188242832701389Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein1e-0655.5
NC_017168:1631052:1635138163513816365261389Yersinia pestis A1122 chromosome, complete genomehypothetical protein1e-0655.5
NC_017154:3898925:3903011390301139043991389Yersinia pestis D106004 chromosome, complete genomehypothetical protein1e-0655.5
NC_014029:3958811:3962897396289739642851389Yersinia pestis Z176003 chromosome, complete genomehypothetical protein1e-0655.5
NC_009708:372422:3765083765083778961389Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeImpA domain-containing protein1e-0655.5
NC_010465:429095:4331814331814345691389Yersinia pseudotuberculosis YPIII, complete genometype VI secretion-associated protein, VC_A0119 family1e-0655.1
NC_016822:246715:2529252529252542771353Shigella sonnei 53G, complete genomehypothetical protein5e-0653.1
NC_016902:3863932:3869646386964638709981353Escherichia coli KO11FL chromosome, complete genomeImpA domain-containing protein6e-0652.8
CP002185:234719:2409052409052422571353Escherichia coli W, complete genomeT6SS-associated protein6e-0652.8
CP002516:3863932:3869646386964638709981353Escherichia coli KO11, complete genomeImpA domain protein6e-0652.8