Pre_GI: BLASTP Hits

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Query: NC_007347:3612918:3625222 Ralstonia eutropha JMP134 chromosome 1, complete sequence

Start: 3625222, End: 3625824, Length: 603

Host Lineage: Cupriavidus pinatubonensis; Cupriavidus; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism is found in both soil and water and has great potential for use in bioremediation as it is capable of degrading a large list of pollutants including chlorinated aromatic compounds. The bacterium can utilize hydrogen, carbon dioxide, as well as organic compounds for growth and is a model organism for hydrogen oxidation as it can grow on hydrogen as the sole energy source. It was originally isolated due to its ability to degrade the herbicide 2,4-dichlorophenoxyacetic acid, which is due to the degradative functions being encoded on a plasmid (pJP4). Metabolically versatile bacterium. Cupriavidus necator also known as Ralstonia eutropha is a soil bacterium with diverse metabolic abilities. Strains of this organism are resistant to high levels of copper or are able to degrade chloroaromatic compounds such as halobenzoates and nitrophenols making them useful for bioremediation.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007951:2206263:222341022234102224009600Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative recombinase, transposition resolvase, TnpR4e-76283
NC_014307:1619000:163414016341401634727588Ralstonia solanacearum CFBP2957 chromosome, complete genomeresolvase, N-:resolvase helix-turN-helix region5e-74276
NC_015136:1301576:131367313136731314269597Burkholderia sp. CCGE1001 chromosome 1, complete sequenceresolvase1e-73275
NC_020908:2466446:247528524752852475920636Octadecabacter arcticus 238, complete genomeDNA integration/recombination/inversion protein5e-25114
NC_011757:5742290:576114257611425761774633Methylobacterium chloromethanicum CM4, complete genomeResolvase domain6e-25114
NC_011894:6516856:654076265407626541397636Methylobacterium nodulans ORS 2060, complete genomeResolvase domain protein9e-24109
NC_016812:463000:472460472460473137678Sinorhizobium fredii HH103, complete genometransposon Tn552 DNA-invertase binR1e-21102
NC_014034:1330843:134000413400041340639636Rhodobacter capsulatus SB1003 chromosome, complete genomerecombinase1e-2099.8
NC_011894:6220791:623758162375816238177597Methylobacterium nodulans ORS 2060, complete genome3e-1788.2
NC_021150:4350461:435918743591874359756570Azotobacter vinelandii CA6, complete genomeResolvase-like protein8e-1580.5
NC_012560:4350465:435919143591914359760570Azotobacter vinelandii DJ, complete genomeResolvase-like protein8e-1580.5
NC_015410:2258800:227344222734422274011570Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein4e-1478.2
NC_008702:815264:829733829733830302570Azoarcus sp. BH72, complete genomeputative resolvase5e-1477.4
NC_015593:2553500:256540025654002565978579Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeResolvase domain-containing protein4e-1374.7
NC_013456:2528284:253422625342262534834609Vibrio sp. Ex25 chromosome 1, complete genomeresolvase putative1e-1272.8
NC_015733:4130000:414638341463834146976594Pseudomonas putida S16 chromosome, complete genometransposon resolvase4e-1271.2
NC_012559:1635922:165037916503791650963585Laribacter hongkongensis HLHK9, complete genomeTransposon Tn2501 resolvase9e-1270.1
NC_015136:1301576:130993413099341310527594Burkholderia sp. CCGE1001 chromosome 1, complete sequenceresolvase2e-1168.9
NC_015381:3607626:361913336191333619708576Burkholderia gladioli BSR3 chromosome 1, complete sequenceTransposon Tn2501 resolvase2e-1168.6
NC_010338:1394550:140808814080881408630543Caulobacter sp. K31, complete genomeResolvase domain6e-1167.4
NC_015740:2614317:262086026208602621420561Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein6e-1167.4
NC_018678:1820390:183113018311301831720591Alteromonas macleodii str. 'English Channel 673' chromosome,resolvase1e-1066.2
NC_012724:3222415:323478532347853235360576Burkholderia glumae BGR1 chromosome 1, complete genomeResolvase2e-1065.9
NC_010508:2776283:278807327880732788648576Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceResolvase domain2e-1065.5
NC_009256:458649:476097476097476684588Burkholderia vietnamiensis G4 chromosome 1, complete sequenceresolvase domain-containing protein2e-1065.5
NC_005773:4797242:481127048112704811839570Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein3e-1064.7
NC_008782:1863853:187305118730511873632582Acidovorax sp. JS42, complete genomeResolvase, N-terminal domain2e-0962.4
NC_010545:11950:274182741827957540Corynebacterium urealyticum DSM 7109, complete genomeputative resolvase3e-0961.6
NC_014311:1635408:165529016552901655868579Ralstonia solanacearum PSI07 chromosome, complete genomesite-specific DNA recombinase; e14 prophage3e-0961.6
NC_009052:2512373:251582725158272516417591Shewanella baltica OS155, complete genomeResolvase, N-terminal domain5e-0960.8
NC_006351:520500:532668532668533243576Burkholderia pseudomallei K96243 chromosome 2, complete sequencetransposon Tn2501 resolvase1e-0859.7
NC_014841:248487:263402263402263989588Pantoea sp. At-9b plasmid pPAT9B04, complete sequenceResolvase domain protein2e-0859.3
NC_008542:2631138:264083826408382641416579Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceResolvase, N-terminal domain2e-0859.3
NC_008060:1945597:195529719552971955875579Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceResolvase-like2e-0859.3
NC_018080:3088866:309182730918273092387561Pseudomonas aeruginosa DK2 chromosome, complete genomeresolvase domain-containing protein2e-0859.3
NC_006363:36959:478534785348404552Nocardia farcinica IFM 10152 plasmid pNF2, complete sequenceputative resolvase2e-0858.9
NC_008781:4178115:419245341924534193028576Polaromonas naphthalenivorans CJ2, complete genomeResolvase, N-terminal domain2e-0858.9
NC_009074:94000:102912102912103490579Burkholderia pseudomallei 668 chromosome I, complete sequenceresolvase, N-terminal:Resolvase helix-turn-helix region3e-0858.5
NC_009140:121107:124082124082124699618Salmonella enterica enterica sv Newport str. SL254, complete6e-0857.4
NC_007650:2429307:244797324479732448641669Burkholderia thailandensis E264 chromosome II, complete sequenceTransposon Tn2501 resolvase6e-0857.4
NC_008341:29038:398433984340400558Nitrosomonas eutropha C91 plasmid1, complete sequenceResolvase, N-terminal domain5e-0857.4
NC_008344:1364142:137394513739451374502558Nitrosomonas eutropha C91, complete genomeResolvase, N-terminal domain5e-0857.4
NC_003384:109036:122365122365122922558Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmidresolvase5e-0857.4
NC_008609:1976403:206462720646272065184558Pelobacter propionicus DSM 2379, complete genomeResolvase, N-terminal domain8e-0857
NC_010002:2933909:295119029511902951747558Delftia acidovorans SPH-1, complete genomeResolvase domain8e-0857
NC_007434:1322500:134103513410351341610576Burkholderia pseudomallei 1710b chromosome I, complete sequencetransposon Tn2501 resolvase1e-0756.6
NC_012947:2366000:237314923731492373739591Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeresolvase1e-0756.6
NC_012967:1403733:142469014246901425280591Escherichia coli B str. REL606 chromosome, complete genomeputative site-specific recombinase1e-0756.6
NC_004431:3012668:302138630213863021976591Escherichia coli CFT073, complete genomePutative DNA-invertase from lambdoid prophage Rac1e-0756.6
NC_012947:2189533:219887621988762199466591Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeresolvase1e-0756.6
NC_012967:1593101:160138716013871601977591Escherichia coli B str. REL606 chromosome, complete genomeputative site-specific recombinase1e-0756.6
NC_013456:2984491:299238029923802992952573Vibrio sp. Ex25 chromosome 1, complete genomeresolvase N-terminal domain protein9e-0856.6
NC_015733:5909821:592850459285045929064561Pseudomonas putida S16 chromosome, complete genomeTn501 transposition resolvase1e-0756.2
NC_013209:2782500:278940827894082789986579Acetobacter pasteurianus IFO 3283-01, complete genomeDNA resolvase1e-0756.2
NC_017100:2782303:278920027892002789778579Acetobacter pasteurianus IFO 3283-03, complete genomeDNA resolvase1e-0756.2
NC_017108:2779303:278653727865372787115579Acetobacter pasteurianus IFO 3283-12, complete genomeDNA resolvase1e-0756.2
NC_017111:2779321:278655527865552787133579Acetobacter pasteurianus IFO 3283-32, complete genomeDNA resolvase1e-0756.2
NC_017121:2781000:278795727879572788535579Acetobacter pasteurianus IFO 3283-07, complete genomeDNA resolvase1e-0756.2
NC_017125:2782283:278918027891802789758579Acetobacter pasteurianus IFO 3283-22, complete genomeDNA resolvase1e-0756.2
NC_017146:2782325:278922227892222789800579Acetobacter pasteurianus IFO 3283-26, complete genomeDNA resolvase1e-0756.2
NC_017150:2689920:269715426971542697732579Acetobacter pasteurianus IFO 3283-01-42C, complete genomeDNA resolvase1e-0756.2
NC_015633:2801321:280895428089542809553600Vibrio anguillarum 775 chromosome chromosome I, complete sequenceDNA integration/recombination/inversion protein2e-0755.8
NC_008463:1293079:130641013064101306970561Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative resolvase, essential for transposition2e-0755.8
NC_002678:3210751:322303432230343223579546Mesorhizobium loti MAFF303099, complete genomeDNA invertase gene, RlgA2e-0755.8
NC_016846:24500:256552565526215561Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS2,Tn4653 resolvase2e-0755.8
NC_015576:1442713:146084114608411461422582Mycobacterium sp. JDM601 chromosome, complete genomesite-specific recombinase PinR2e-0755.8
NC_009445:6621996:665476866547686655373606Bradyrhizobium sp. ORS 278 chromosome, complete genometransposon Tn21 resolvase2e-0755.8
NC_009838:81913:945989459895077480Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequencerecombinase2e-0755.5
NC_004757:905417:914348914348914908561Nitrosomonas europaea ATCC 19718, complete genomeSite-specific recombinase2e-0755.5
NC_010622:2385932:239489423948942395490597Burkholderia phymatum STM815 chromosome 1, complete sequenceResolvase domain protein3e-0755.1
NC_009439:4661102:467014646701464670841696Pseudomonas mendocina ymp, complete genomeresolvase domain-containing protein4e-0754.7
NC_008345:4107847:411968141196814120238558Shewanella frigidimarina NCIMB 400, complete genomeResolvase, N-terminal domain protein4e-0754.7
NC_006625:63342:812898128981846558Klebsiella pneumoniae NTUH-K2044 plasmid pK2044, complete sequenceresolvase domain-containing protein4e-0754.7
NC_002695:3189425:320075132007513201377627Escherichia coli O157:H7 str. Sakai, complete genomeputative resolvase4e-0754.7
NC_002655:3260500:327070732707073271333627Escherichia coli O157:H7 EDL933, complete genomeputative resolvase4e-0754.7
NC_011353:3276734:330486733048673305493627Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeresolvase domain-containing protein4e-0754.7
NC_013008:3231414:325973832597383260364627Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeresolvase4e-0754.7
NC_013941:2928000:294181729418172942443627Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeResolvase domain protein4e-0754.7
NC_010473:1712984:172127117212711721861591Escherichia coli str. K-12 substr. DH10B, complete genomeQin prophage; predicted site-specific recombinase5e-0754.3
NC_000913:1625500:163164616316461632236591Escherichia coli K12, complete genomeQin prophage; predicted site-specific recombinase5e-0754.3
AC_000091:1627049:163533616353361635926591Escherichia coli W3110 DNA, complete genomepredicted site-specific recombinase5e-0754.3
NC_012759:1517500:152370515237051524295591Escherichia coli BW2952 chromosome, complete genomeQin prophage; putative site-specific recombinase5e-0754.3
NC_008120:62000:838588385884478621Yersinia pestis Antiqua plasmid pMT, complete sequenceresolvase6e-0753.9
NC_005815:61148:959419594196561621Yersinia pestis biovar Microtus str. 91001 plasmid pMT1, completeputative resolvase6e-0753.9
NC_004838:51013:601616016160781621Yersinia pestis KIM plasmid pMT-1, complete sequenceputative resolvase6e-0753.9
NC_008118:56777:883038830388923621Yersinia pestis Nepal516 plasmid pMT, complete sequenceresolvase6e-0753.9
NC_003134:64672:712167121671836621Yersinia pestis CO92 plasmid pMT1, complete sequenceputative resolvase6e-0753.9
NC_010158:92819:101955101955102575621Yersinia pestis Angola plasmid pMT-pPCP, complete sequenceputative resolvase6e-0753.9
NC_009378:106193:124395124395125015621Yersinia pestis Pestoides F plasmid MT, complete sequenceresolvase6e-0753.9
NC_008609:1394377:139971913997191400297579Pelobacter propionicus DSM 2379, complete genomeResolvase, N-terminal domain1e-0653.1
NC_014963:113015:129583129583130182600Terriglobus saanensis SP1PR4 chromosome, complete genomeResolvase domain-containing protein1e-0653.1
NC_009656:5475540:549848254984825498871390Pseudomonas aeruginosa PA7 chromosome, complete genometransposon Tn21 resolvase1e-0653.1
NC_017328:1075535:111282011128201113380561Shigella flexneri 2002017 chromosome, complete genomeTransposon Tn21 resolvase1e-0652.8
NC_016860:4055117:407155640715564072116561Salmonella enterica subsp. enterica serovar Typhimurium strtransposon Tn21 resolvase TnpR1e-0652.8
NC_008573:195317:209233209233209793561Shewanella sp. ANA-3 plasmid 1, complete sequenceResolvase, N-terminal domain protein1e-0652.8
NC_009349:78000:972929729297852561Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completeTnpR resolvase1e-0652.8
NC_012752:1:673267327292561Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) plasmidputative resolvase HDEF_p00072e-0652.4
NC_015740:1291739:129359212935921294155564Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeTnAtcArs resolvase2e-0652.4
NC_011415:644811:652676652676653266591Escherichia coli SE11 chromosome, complete genomeputative phage resolvase2e-0652.4
NC_009342:589741:594029594029594808780Corynebacterium glutamicum R chromosome, complete genomehypothetical protein3e-0651.6
NC_016616:760145:771982771982772542561Dechlorosoma suillum PS chromosome, complete genomesite-specific recombinase, DNA invertase Pin3e-0651.6
NC_020908:1472981:148177214817721482320549Octadecabacter arcticus 238, complete genomeDNA integration/recombination/inversion protein3e-0651.6
NC_011886:177039:188420188420188986567Arthrobacter chlorophenolicus A6, complete genomeResolvase domain protein4e-0651.2
NC_015145:92397:117011117011117577567Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomesite-specific recombinase, DNA invertase Pin5e-0650.8
NC_009349:78000:817558175510125019496Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, complete7e-0650.4
NC_014973:1941500:194952219495221950079558Geobacter sp. M18 chromosome, complete genomeResolvase domain-containing protein8e-0650.4
NC_009921:5681677:569052656905265691095570Frankia sp. EAN1pec, complete genomeResolvase domain9e-0650.1
NC_004578:2560473:256975325697532570166414Pseudomonas syringae pv. tomato str. DC3000, complete genomeresolvase, putative9e-0650.1