Pre_GI: BLASTP Hits

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Query: NC_007347:1596040:1609613 Ralstonia eutropha JMP134 chromosome 1, complete sequence

Start: 1609613, End: 1610332, Length: 720

Host Lineage: Cupriavidus pinatubonensis; Cupriavidus; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism is found in both soil and water and has great potential for use in bioremediation as it is capable of degrading a large list of pollutants including chlorinated aromatic compounds. The bacterium can utilize hydrogen, carbon dioxide, as well as organic compounds for growth and is a model organism for hydrogen oxidation as it can grow on hydrogen as the sole energy source. It was originally isolated due to its ability to degrade the herbicide 2,4-dichlorophenoxyacetic acid, which is due to the degradative functions being encoded on a plasmid (pJP4). Metabolically versatile bacterium. Cupriavidus necator also known as Ralstonia eutropha is a soil bacterium with diverse metabolic abilities. Strains of this organism are resistant to high levels of copper or are able to degrade chloroaromatic compounds such as halobenzoates and nitrophenols making them useful for bioremediation.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015856:3436951:344127134412713441717447Collimonas fungivorans Ter331 chromosome, complete genomeinosine-5'-monophosphate dehydrogenase3e-30132
NC_008702:1094663:110917911091791109628450Azoarcus sp. BH72, complete genomeconserved hypothetical protein8e-29127
NC_008781:2883968:290124029012402901695456Polaromonas naphthalenivorans CJ2, complete genomeCBS domain containing protein1e-27123
NC_010676:304405:3071933071933086561464Burkholderia phytofirmans PsJN chromosome 2, complete sequenceNAD(P)(+) transhydrogenase (AB-specific)7e-1890.9
NC_015724:339500:3412863412863427611476Cupriavidus necator N-1 plasmid BB2p, complete sequenceNAD(P) transhydrogenase subunit beta3e-1789
NC_014117:442616:5067375067375081881452Burkholderia sp. CCGE1002 chromosome chromosome 1, completeNAD(P)(+) transhydrogenase (AB-specific)6e-1787.8
NC_007912:1231436:1242879124287912442971419Saccharophagus degradans 2-40, complete genomeNAD(P) transhydrogenase, beta subunit2e-1479.3
NC_015222:523915:5296685296685310501383Nitrosomonas sp. AL212 chromosome, complete genomeNAD(P)(+) transhydrogenase (AB-specific)2e-1375.9
NC_013851:949973:9717279717279731271401Allochromatium vinosum DSM 180 chromosome, complete genomeNAD(P)(+) transhydrogenase (AB-specific)8e-1374.3
NC_010125:333895:3551923551923566191428Gluconacetobacter diazotrophicus PAl 5, complete genomeputative NAD(P) transhydrogenase subunit beta8e-1374.3
NC_011365:2637567:2659833265983326612601428Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeNAD(P)(+) transhydrogenase8e-1374.3
NC_013093:5653093:5657961565796156593941434Actinosynnema mirum DSM 43827, complete genomeNAD(P)(+) transhydrogenase (AB-specific)9e-1373.9
NC_018720:1468397:1481380148138014827891410Bifidobacterium asteroides PRL2011 chromosome, complete genomeNAD(P) transhydrogenase subunit beta4e-1272
NC_014039:708427:7100177100177114381422Propionibacterium acnes SK137 chromosome, complete genomeNAD(P) transhydrogenase subunit beta1e-1170.5
NC_016511:678582:6833116833116847321422Propionibacterium acnes TypeIA2 P.acn31 chromosome, completeNAD(P) transhydrogenase subunit beta1e-1170.5
NC_016512:679688:6826966826966841171422Propionibacterium acnes TypeIA2 P.acn17 chromosome, completeNAD(P) transhydrogenase subunit beta1e-1170.5
NC_015514:3351052:3377818337781833792001383Cellulomonas fimi ATCC 484 chromosome, complete genomeNAD(P)(+) transhydrogenase2e-1169.3
NC_006087:2326143:2326143232614323275641422Leifsonia xyli subsp. xyli str. CTCB07, complete genomeNADP-transhydrogenase oxidoreductase, beta subunit2e-1169.3
NC_000963:83408:8340883408848051398Rickettsia prowazekii str. Madrid E, complete genomeNAD(P) TRANSHYDROGENASE SUBUNIT BETA (pntB)5e-1168.2
NC_017050:83406:8340683406848031398Rickettsia prowazekii str. Katsinyian chromosome, complete genomeNAD(p) transhydrogenase subunit beta5e-1168.2
NC_017057:83415:8341583415848121398Rickettsia prowazekii str. RpGvF24 chromosome, complete genomeNAD(p) transhydrogenase subunit beta5e-1168.2
NC_010170:4409683:4414595441459544160101416Bordetella petrii, complete genomeNAD(P) transhydrogenase subunit beta4e-1168.2
NC_012633:98000:98674986741000711398Rickettsia africae ESF-5, complete genomeNAD(p) transhydrogenase subunit beta7e-1167.8
NC_017044:80384:1017881017881031851398Rickettsia parkeri str. Portsmouth chromosome, complete genomeNAD(p) transhydrogenase subunit beta7e-1167.8
NC_009882:100000:1008511008511022481398Rickettsia rickettsii str. 'Sheila Smith', complete genomeNAD(p) transhydrogenase subunit beta6e-1167.8
NC_010263:100000:1008501008501022471398Rickettsia rickettsii str. Iowa, complete genomeNAD(P) transhydrogenase subunit beta6e-1167.8
NC_016908:100000:1008841008841022811398Rickettsia rickettsii str. Colombia chromosome, complete genomeNAD(p) transhydrogenase subunit beta6e-1167.8
NC_016909:100000:1008791008791022761398Rickettsia rickettsii str. Arizona chromosome, complete genomeNAD(p) transhydrogenase subunit beta6e-1167.8
NC_016913:1066790:1066790106679010681871398Rickettsia rickettsii str. Brazil chromosome, complete genomeNAD(p) transhydrogenase subunit beta6e-1167.8
NC_016914:99184:1009371009371023341398Rickettsia rickettsii str. Hino chromosome, complete genomeNAD(p) transhydrogenase subunit beta6e-1167.8
NC_017058:129474:1300891300891314861398Rickettsia australis str. Cutlack chromosome, complete genomeNAD(p) transhydrogenase subunit beta9e-1167.4
NC_015703:4348545:436525843652584365698441Runella slithyformis DSM 19594 chromosome, complete genomeputative signal transduction protein with CBS domains9e-1167.4
NC_017062:61500:7728377283786801398Rickettsia typhi str. B9991CWPP chromosome, complete genomeNAD(p) transhydrogenase subunit beta1e-1067
NC_006142:57571:7686676866782631398Rickettsia typhi str. Wilmington, complete genomeNAD(P)(+) transhydrogenase (B-specific) beta subunit1e-1067
NC_013131:9903320:9936767993676799381551389Catenulispora acidiphila DSM 44928, complete genomeNAD(P)(+) transhydrogenase (AB-specific)1e-1067
NC_013457:140474:1420391420391434151377Vibrio sp. Ex25 chromosome 2, complete genomeNAD(P) transhydrogenase subunit beta2e-1066.6
NC_013124:2063460:2085882208588220872941413Acidimicrobium ferrooxidans DSM 10331, complete genomeNAD(P)(+) transhydrogenase (AB-specific)1e-1066.6
NC_012587:713124:7209577209577224021446Rhizobium sp. NGR234, complete genomeNAD(P) transhydrogenase, beta subunit1e-1066.6
NC_009881:92929:9469894698960951398Rickettsia akari str. Hartford, complete genomeNAD(p) transhydrogenase subunit beta1e-1066.6
NC_014215:2295500:2320424232042423218361413Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,NADH dehydrogenase2e-1066.2
NC_019673:1584739:1599399159939916007571359Saccharothrix espanaensis DSM 44229 complete genomeNAD(P) transhydrogenase subunit beta2e-1066.2
NC_016628:193000:1947891947891961651377Vibrio furnissii NCTC 11218 chromosome 2, complete sequenceNAD(P) transhydrogenase subunit beta2e-1066.2
NC_012586:425615:4464554464554479001446Rhizobium sp. NGR234 plasmid pNGR234b, complete sequencepredicted NADP transhydrogenase beta subunit PntB2e-1066.2
NC_017066:57571:7686676866782631398Rickettsia typhi str. TH1527 chromosome, complete genomeNAD(p) transhydrogenase subunit beta2e-1065.9
NC_014966:919442:9344189344189358121395Vibrio vulnificus MO6-24/O chromosome II, complete sequenceNAD(P) transhydrogenase subunit beta3e-1065.9
NC_007511:1147696:115407411540741154535462Burkholderia sp. 383 chromosome 2, complete sequenceputative signal-transduction protein with CBS domains1e-0963.9
NC_006510:591339:593171593171593617447Geobacillus kaustophilus HTA426, complete genomeinosine-5-monophosphate dehydrogenase1e-0963.5
NC_016593:596500:598361598361598807447Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeCBS domain-containing protein yhcV1e-0963.5
NC_010515:2691000:269543326954332695894462Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceputative signal-transduction protein with CBS domains2e-0962.4
NC_015436:1758257:1777655177765517790641410Spirochaeta coccoides DSM 17374 chromosome, complete genomeNAD(P)(+) transhydrogenase (AB-specific)3e-0962
NC_011001:2085986:213812321381232138584462Burkholderia cenocepacia J2315 chromosome 2, complete sequencehypothetical protein7e-0960.8
NC_003910:4234000:4248468424846842498741407Colwellia psychrerythraea 34H, complete genomeNAD(P) transhydrogenase, beta subunit8e-0960.8
NC_013174:2455420:2455420245542024568081389Jonesia denitrificans DSM 20603, complete genomeNAD(P)(+) transhydrogenase (AB-specific)8e-0960.8
NC_008048:2838769:285502328550232855448426Sphingopyxis alaskensis RB2256, complete genomeputative signal-transduction protein with CBS domains1e-0859.7
NC_011661:961129:967097967097967741645Dictyoglomus turgidum DSM 6724, complete genomeputative signal transduction protein with CBS domains7e-0857.8
NC_013642:505518:5100135100135126042592Thermotoga naphthophila RKU-10, complete genomePolynucleotide adenylyltransferase region7e-0857.8
NC_012988:1459961:147030514703051470736432Methylobacterium extorquens DM4, complete genomehypothetical protein1e-0757
NC_014960:2111397:212214721221472122587441Anaerolinea thermophila UNI-1, complete genomehypothetical protein1e-0756.6
NC_011297:787932:796247796247796891645Dictyoglomus thermophilum H-6-12, complete genomeacetoin utilization AcuB protein2e-0756.2
NC_011978:1812000:1826275182627518288692595Thermotoga neapolitana DSM 4359, complete genomeTRNA nucleotidyl transferase-related protein5e-0754.7
NC_007907:4859735:487753448775344878058525Desulfitobacterium hafniense Y51, complete genomehypothetical protein5e-0754.7
NC_016051:81685:8382983829852861458Thermococcus sp. AM4 chromosome, complete genomeinosine-5'-monophosphate dehydrogenase7e-0754.3
NC_020054:3501467:350235035023503502940591Fibrella aestuarina BUZ 2 drat genomeputative signal transduction protein with CBS domains8e-0753.9
NC_019977:2375703:238756223875622388410849Methanomethylovorans hollandica DSM 15978, complete genomeputative signal-transduction protein containing cAMP-binding and CBS domains1e-0653.5
NC_011144:1264871:127086112708611271289429Phenylobacterium zucineum HLK1, complete genomeCBS domain protein1e-0653.5
NC_012039:257962:263136263136264092957Campylobacter lari RM2100, complete genomearabinose-5-phosphate isomerase2e-0652.8
NC_015976:3924962:393890939389093939337429Sphingobium sp. SYK-6, complete genomehypothetical protein3e-0652.4
NC_014171:723155:741351741351741770420Bacillus thuringiensis BMB171 chromosome, complete genomeinosine-5'-monophosphate dehydrogenase3e-0652
NC_008751:2988235:3010767301076730117861020Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeKpsF/GutQ family protein3e-0652
NC_013132:4803460:481106548110654811427363Chitinophaga pinensis DSM 2588, complete genomeputative signal transduction protein with CBS domains3e-0652
NC_009512:4375452:439309043930904394022933Pseudomonas putida F1, complete genomeKpsF/GutQ family protein4e-0651.6
NC_008787:1345988:136062913606291361576948Campylobacter jejuni subsp. jejuni 81-176, complete genomearabinose-5-phosphate isomerase4e-0651.6
NC_008553:329458:339255339255339617363Methanosaeta thermophila PT, complete genomeputative signal-transduction protein with CBS domains5e-0651.6
NC_007005:2686551:273675827367582737198441Pseudomonas syringae pv. syringae B728a, complete genomeCBS8e-0650.8
NC_014816:545441:552105552105552536432Asticcacaulis excentricus CB 48 chromosome 1, complete sequencesignal transduction protein with cbs domains1e-0550.4