Pre_GI Gene

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Host: NC_017044 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017044:80384 Rickettsia parkeri str. Portsmouth chromosome, complete genome

Host Lineage: Rickettsia parkeri; Rickettsia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: Animal pathogen in Mammalia (intracellular obligate). Rickettsiae are obligate intracellular Gram-negative bacteria mostly found in arthropods, some of which cause mild to severe diseases in humans. Rickettsia parkeri, a member of the spotted fever group Rickettsia (SFGR), was first isolated from the Gulf Coast tick, Amblyomma maculatum, in 1937. In 2004, the first confirmed human infection with R. parkeri was reported in a 40-year-old man from the Tidewater area of coastal Virginia. The agent was isolated in cell culture from an eschar biopsy specimen and designated the Portsmouth strain; recently, the first recognized case of tick bite-associated human infection was described.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
80384822521869tRNA uridine 5-carboxymethylaminomethyl modification protein GidAQuickGO ontologyBLASTP
822338281157916S rRNA methyltransferase GidBQuickGO ontologyBLASTP
8280883575768chromosome partitioning ATPaseQuickGO ontologyBLASTP
8356284422861stage 0 sporulation protein JQuickGO ontologyBLASTP
84681863481668putative ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
8635186668318hypothetical proteinBLASTP
86704875288252-dehydro-3-deoxyphosphooctonate aldolaseQuickGO ontologyBLASTP
8805188410360hypothetical proteinBLASTP
8851888631114hypothetical proteinBLASTP
8896589297333Iron-sulfur cluster assembly accessory proteinQuickGO ontologyBLASTP
89527906811155deoxyguanosinetriphosphate triphosphohydrolase-like proteinQuickGO ontologyBLASTP
90831925611731arginyl-tRNA synthetaseQuickGO ontologyBLASTP
9273493408675hypothetical proteinBLASTP
93586958022217DNA topoisomerase IV subunit AQuickGO ontologyBLASTP
9591296106195hypothetical proteinBLASTP
96498978141317hypothetical proteinBLASTP
9809998665567deoxycytidine triphosphate deaminaseQuickGO ontologyBLASTP
9871199169459preprotein translocase subunit SecBQuickGO ontologyBLASTP
99394100107714Transcriptional activator protein CzcRQuickGO ontologyBLASTP
1001111009328227-cyano-7-deazaguanine reductaseQuickGO ontologyBLASTP
101173101733561putative cytoplasmic proteinQuickGO ontologyBLASTP
1017881031851398NADp transhydrogenase subunit betaQuickGO ontologyBLASTP
103326104063738OmpW family outer-membrane proteinQuickGO ontologyBLASTP