Pre_GI: BLASTP Hits

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Query: NC_007333:1743890:1745253 Thermobifida fusca YX, complete genome

Start: 1745253, End: 1745615, Length: 363

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012880:2778795:279891927989192799167249Dickeya dadantii Ech703, complete genomebiotin/lipoyl attachment domain-containing protein1e-1271.6
NC_014323:4665610:471198047119804712228249Herbaspirillum seropedicae SmR1 chromosome, complete genomebiotin carboxyl carrier protein4e-1270.1
NC_013192:171000:174174174174174665492Leptotrichia buccalis DSM 1135, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein3e-1167
NC_011661:1049767:105741910574191057862444Dictyoglomus turgidum DSM 6724, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein1e-1065.1
NC_020411:278000:290667290667291113447Hydrogenobaculum sp. HO, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein3e-1063.9
NC_015587:278000:290671290671291117447Hydrogenobaculum sp. SHO chromosome, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein3e-1063.9
NC_015557:278000:290635290635291081447Hydrogenobaculum sp. 3684 chromosome, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein3e-1063.9
NC_008095:7139056:714388671438867144485600Myxococcus xanthus DK 1622, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein3e-1063.5
NC_006677:435652:461151461151461597447Gluconobacter oxydans 621H, complete genomeBiotin carboxyl carrier protein of acetyl-CoA carboxylase3e-1063.5
NC_015711:8909256:891411089141108914709600Myxococcus fulvus HW-1 chromosome, complete genomeacetyl-CoA carboxylase biotin carboxyl carrier protein7e-1062.4
NC_015499:119200:128829128829129293465Thermodesulfobium narugense DSM 14796 chromosome, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein8e-1062.4
NC_016893:135845:149419149419149883465Wigglesworthia glossinidia endosymbiont of Glossina morsitansacetyl CoA carboxylase, BCCP subunit3e-0960.5
NC_015259:734795:761800761800762033234Polymorphum gilvum SL003B-26A1 chromosome, complete genomeAcetyl-CoA carboxylase biotin carboxyl carrier protein4e-0960.1
NC_016510:1874942:188209618820961882590495Flavobacterium columnare ATCC 49512 chromosome, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrierprotein5e-0960.1
NC_007712:254000:272835272835273269435Sodalis glossinidius str. 'morsitans', complete genomebiotin carboxyl carrier protein6e-0959.3
NC_015391:1323171:133354913335491334037489Carnobacterium sp. 17-4 chromosome, complete genomebiotin carboxyl carrier protein of acetyl-CoA carboxylase8e-0958.9
NC_013209:2248119:224992222499222250371450Acetobacter pasteurianus IFO 3283-01, complete genomeacetyl-CoA carboxylase biotin carboxyl carrier protein2e-0858.2
NC_017111:2248096:224989922498992250348450Acetobacter pasteurianus IFO 3283-32, complete genomeacetyl-CoA carboxylase biotin carboxyl carrier protein2e-0858.2
NC_011753:3088952:310321831032183103670453Vibrio splendidus LGP32 chromosome 1, complete genomeputative biotin carboxyl carrier protein1e-0858.2
NC_004557:81362:915809158092038459Clostridium tetani E88, complete genomebiotin carboxyl carrier protein of acetyl-coA carboxylase2e-0857.4
NC_007963:2555012:257289025728902573354465Chromohalobacter salexigens DSM 3043, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein3e-0857.4
NC_009483:2086021:211536821153682115841474Geobacter uraniireducens Rf4 chromosome, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein3e-0857
NC_011894:957897:975779975779976204426Methylobacterium nodulans ORS 2060, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein4e-0857
NC_012660:2143376:216734421673442167589246Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein5e-0856.6
NC_003030:3763054:377267237726723773151480Clostridium acetobutylicum ATCC 824, complete genomeBiotin carboxyl carrier protein of acetyl-CoA carboxylase5e-0856.6
NC_015687:3766000:377425537742553774734480Clostridium acetobutylicum DSM 1731 chromosome, complete genomebiotin carboxyl carrier protein of acetyl-CoA carboxylase5e-0856.6
NC_017295:3762622:377202437720243772503480Clostridium acetobutylicum EA 2018 chromosome, complete genomeacetyl-CoA carboxylase biotin carboxyl carrier protein5e-0856.6
NC_014935:1955226:197391719739171974387471Nitratifractor saLSUginis DSM 16511 chromosome, complete genomebiotin carboxyl carrier protein5e-0856.2
NC_015277:6213304:918291829667486Sphingobacterium sp. 21 chromosome, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein7e-0855.8
NC_013204:2955500:2974093297409329759821890Eggerthella lenta DSM 2243, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein2e-0754.7
NC_007498:2475781:247972724797272480203477Pelobacter carbinolicus DSM 2380, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein2e-0754.7
NC_011979:3341099:334109933410993341566468Geobacter sp. FRC-32, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein2e-0754.7
NC_015738:629297:6453906453906472821893Eggerthella sp. YY7918, complete genomehypothetical protein2e-0754.7
NC_010674:1170264:118044411804441180938495Clostridium botulinum B str. Eklund 17B, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein2e-0754.7
NC_021182:4882494:489033748903374890831495Clostridium pasteurianum BC1, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein2e-0754.7
NC_012778:1778654:179470417947041795156453Eubacterium eligens ATCC 27750, complete genomeoxaloacetate decarboxylase2e-0754.3
NC_007760:535825:5477025477025506802979Anaeromyxobacter dehalogenans 2CP-C, complete genomeBiotin carboxylase2e-0754.3
NC_014219:2491021:249676224967622497265504Bacillus selenitireducens MLS10 chromosome, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein2e-0754.3
NC_009495:3832500:384160238416023842078477Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeacetyl-CoA carboxylase biotin carboxyl carrier protein3e-0753.9
NC_009697:3809044:381813638181363818612477Clostridium botulinum A str. ATCC 19397 chromosome, completeacetyl-CoA carboxylase, biotin carboxyl carrier protein3e-0753.9
NC_009698:3706154:371524637152463715722477Clostridium botulinum A str. Hall chromosome, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein3e-0753.9
NC_012563:4101000:411012041101204110596477Clostridium botulinum A2 str. Kyoto, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein3e-0753.9
NC_016012:805680:814648814648815133486Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein3e-0753.9
NC_009699:3940984:395008039500803950556477Clostridium botulinum F str. Langeland chromosome, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein3e-0753.9
NC_017297:3939328:394842339484233948899477Clostridium botulinum F str. 230613 chromosome, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein3e-0753.9
NC_011312:3060371:307445030744503074905456Aliivibrio salmonicida LFI1238 chromosome chromosome 1, completeacetyl-CoA carboxylase biotin carboxyl carrier protein subunit3e-0753.5
NC_013720:5769910:584463458446345845143510Pirellula staleyi DSM 6068, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein4e-0753.5
NC_010520:3938490:394759639475963948072477Clostridium botulinum A3 str. Loch Maree, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein4e-0753.5
NC_014393:4988127:499625749962574996757501Clostridium cellulovorans 743B chromosome, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein5e-0753.1
NC_010161:1179000:119343511934351193932498Bartonella tribocorum CIP 105476, complete genomeacetyl-CoA carboxylase biotin carboxyl carrier protein subunit5e-0753.1
NC_013798:345339:371309371309371797489Streptococcus gallolyticus UCN34, complete genomeacetyl-CoA carboxylase (biotin carboxyl carrier subunit)6e-0752.8
NC_012658:3923546:393265539326553933131477Clostridium botulinum Ba4 str. 657 chromosome, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein9e-0752.4
NC_009617:1278000:128634312863431286858516Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein1e-0652
NC_012792:1091669:111160611116061112046441Variovorax paradoxus S110 chromosome 2, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein1e-0652
NC_020291:1266885:129514412951441295659516Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomebiotin carboxyl carrier protein of acetyl-CoA carboxylase AccB1e-0651.6
NC_014310:785220:786251786251786709459Ralstonia solanacearum PSI07 megaplasmid, complete sequencebiotin carboxyl carrier protein of acetyl-CoA carboxylase (bccp)2e-0651.2
NC_014328:4546390:455466945546694555181513Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative biotin carboxyl carrier protein2e-0651.2
NC_014541:475350:520297520297520749453Ferrimonas balearica DSM 9799 chromosome, complete genomebiotin carboxyl carrier protein3e-0650.4
NC_008593:37456:477024770248190489Clostridium novyi NT, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein3e-0650.4
NC_010080:1885677:189915518991551899625471Lactobacillus helveticus DPC 4571, complete genomeAcetyl-CoA biotin carboxyl carrier3e-0650.4
NC_018528:1932000:194786319478631948333471Lactobacillus helveticus R0052 chromosome, complete genomeacetyl-CoA biotin carboxyl carrier4e-0650.1
NC_015602:1949610:195427119542711954741471Lactobacillus kefiranofaciens ZW3 chromosome, complete genomeacetyl-CoA biotin carboxyl carrier4e-0650.1
NC_013939:420500:437876437876438358483Deferribacter desulfuricans SSM1, complete genomeacetyl-CoA carboxylase biotin carboxyl carrier protein4e-0650.1
NC_010001:649000:660000660000660431432Clostridium phytofermentans ISDg, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein6e-0649.3
NC_015425:34861:470064700647485480Clostridium botulinum BKT015925 chromosome, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein8e-0649.3
NC_015275:3299923:330784733078473308308462Clostridium lentocellum DSM 5427 chromosome, complete genomeacetyl-CoA carboxylase, biotin carboxyl carrier protein1e-0548.9