Pre_GI: BLASTP Hits

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Query: NC_006361:4098469:4105949 Nocardia farcinica IFM 10152, complete genome

Start: 4105949, End: 4106791, Length: 843

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016887:1093609:110105311010531101895843Nocardia cyriacigeorgica GUH-2, complete genomeputative DNA-binding protein1e-73276
NC_013510:465188:482165482165483013849Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, XRE family2e-55215
NC_003888:3111998:312441731244173125262846Streptomyces coelicolor A3(2), complete genomeregulatory protein1e-51203
NC_016109:4753493:476778247677824768546765Kitasatospora setae KM-6054, complete genomehypothetical protein1e-45183
NC_016109:4455158:446682644668264467680855Kitasatospora setae KM-6054, complete genomeputative transcriptional regulator1e-44179
NC_018524:301992:314254314254315090837Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomehelix-turn-helix family protein4e-44178
NC_003903:167825:178957178957179805849Streptomyces coelicolor A3(2) plasmid SCP1, complete sequencehypothetical protein5e-44177
NC_013929:1799594:182023918202391821093855Streptomyces scabiei 87.22 chromosome, complete genomeregulatory protein1e-42173
NC_013929:6343000:635192363519236352771849Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein1e-42173
NC_016109:6640000:664741066474106648264855Kitasatospora setae KM-6054, complete genomeputative transcriptional regulator6e-42171
NC_003155:6295078:630173663017366302587852Streptomyces avermitilis MA-4680, complete genomeDNA-binding protein7e-40164
NC_010572:8493946:444144415283843Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative DNA-binding protein1e-30133
NC_010572:8493946:854064785406478541489843Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative DNA-binding protein1e-30133
NC_010572:1:444144415283843Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative DNA-binding protein1e-30133
NC_010572:5445081:547300054730005473845846Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative DNA-binding protein6e-29127
NC_021177:2766910:277838827783882779236849Streptomyces fulvissimus DSM 40593, complete genomePutative DNA-binding protein1e-28127
NC_021177:6127431:613261361326136133464852Streptomyces fulvissimus DSM 40593, complete genomeTranscriptional regulator8e-28124
NC_016109:7445603:745160774516077452446840Kitasatospora setae KM-6054, complete genomeputative transcriptional regulator7e-26117
NC_016111:1546505:155441115544111555241831Streptomyces cattleya NRRL 8057, complete genomehypothetical protein2e-25116
NC_008278:6885254:690516169051616905994834Frankia alni ACN14a, complete genomePutative protein; Putative regulatory protein9e-23107
NC_018524:2246225:225320822532082254032825Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomehelix-turn-helix family protein7e-23107
NC_013929:3299736:334588333458833346713831Streptomyces scabiei 87.22 chromosome, complete genomeregulatory protein5e-21101
NC_016111:5515462:552138055213805521865486Streptomyces cattleya NRRL 8057, complete genomeHelix-turn-helix protein (fragment)2e-1892.8
NC_018524:301992:313568313568314176609Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeputative dNA-binding protein2e-1789.7
NC_016582:6999074:701136370113637012175813Streptomyces bingchenggensis BCW-1 chromosome, complete genomeDNA-binding protein4e-1685.5
NC_013595:8338619:834680983468098347672864Streptosporangium roseum DSM 43021, complete genomehypothetical protein4e-1685.5
NC_007333:1559321:156710515671051568004900Thermobifida fusca YX, complete genomeputative DNA-binding protein4e-1582
NC_014210:1588426:159930915993091600181873Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,helix-turn-helix domain protein1e-1480.5
NC_003155:6295078:630347763034776304325849Streptomyces avermitilis MA-4680, complete genomeDNA-binding protein5e-1375.1
NC_008278:132000:141420141420142196777Frankia alni ACN14a, complete genomePutative DNA-binding protein1e-1273.9
NC_007777:461500:470552470552471442891Frankia sp. CcI3, complete genomeputative DNA-binding protein5e-1272
NC_007333:1129826:114288611428861143740855Thermobifida fusca YX, complete genomehelix-turn-helix motif2e-1169.7
NC_014830:13179:256642566426587924Intrasporangium calvum DSM 43043 chromosome, complete genomehelix-turn-helix domain protein4e-1168.9
NC_015434:4640769:464580646458064646765960Verrucosispora maris AB-18-032 chromosome, complete genomehelix-turn-helix domain-containing protein5e-1168.6
NC_017093:8518961:852462485246248525514891Actinoplanes missouriensis 431, complete genomeputative DNA-binding protein6e-1168.2
NC_014165:2888961:290308629030862903943858Thermobispora bispora DSM 43833 chromosome, complete genomehelix-turn-helix domain-containing protein6e-1168.2
NC_013510:5309143:531986853198685320725858Thermomonospora curvata DSM 43183, complete genomehelix-turn-helix domain protein6e-1168.2
NC_008278:6885254:690729269072926908092801Frankia alni ACN14a, complete genomeputative DNA-binding protein1e-1067.4
NC_013510:5115500:513205451320545132719666Thermomonospora curvata DSM 43183, complete genomehypothetical protein9e-1167.4
NC_013929:7663631:766986276698627670857996Streptomyces scabiei 87.22 chromosome, complete genomeDNA-binding protein6e-1065.1
NC_003155:5005913:500736750073675008239873Streptomyces avermitilis MA-4680, complete genomeDNA-binding protein8e-1064.3
NC_015434:3755560:376664437666443767525882Verrucosispora maris AB-18-032 chromosome, complete genomehelix-turn-helix domain-containing protein1e-0963.9
NC_014666:8198554:822022582202258221091867Frankia sp. EuI1c chromosome, complete genomehelix-turn-helix domain protein1e-0963.9
NC_016582:3763476:377266637726663773532867Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative DNA-binding protein2e-0963.5
NC_018750:6950695:697001969700196970894876Streptomyces venezuelae ATCC 10712, complete genomeputative DNA-binding protein4e-0962
NC_017186:7841740:785295378529537853720768Amycolatopsis mediterranei S699 chromosome, complete genomehypothetical protein1e-0860.8
NC_014318:7821227:785290778529077853674768Amycolatopsis mediterranei U32 chromosome, complete genomehelix-turn-helix domain-containing protein1e-0860.8
NC_007333:2093167:210360821036082104447840Thermobifida fusca YX, complete genomehelix-turn-helix motif1e-0860.5
NC_016887:1949927:196913919691391969894756Nocardia cyriacigeorgica GUH-2, complete genomeXRE family transcriptional regulator2e-0860.1
NC_016582:9664000:967380696738069674723918Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein2e-0859.7
NC_014210:1588426:160049716004971601357861Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, XRE family2e-0859.7
NC_013510:1637730:164894816489481649778831Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, XRE family5e-0858.5
NC_014666:1117000:113569311356931136553861Frankia sp. EuI1c chromosome, complete genomehelix-turn-helix domain protein7e-0858.2
NC_018750:6192970:620089562008956201815921Streptomyces venezuelae ATCC 10712, complete genomeregulatory protein2e-0756.6
NC_016111:2651500:266677826667782667587810Streptomyces cattleya NRRL 8057, complete genomehypothetical protein2e-0756.6
NC_016113:1143580:115353911535391154375837Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequenceDNA-binding protein3e-0756.2
NC_009380:581000:589581589581590393813Salinispora tropica CNB-440 chromosome, complete genomehelix-turn-helix domain-containing protein2e-0756.2
NC_009953:1034809:104109910410991041896798Salinispora arenicola CNS-205 chromosome, complete genomehelix-turn-helix domain-containing protein3e-0755.8
NC_009380:725870:725870725870726763894Salinispora tropica CNB-440 chromosome, complete genomehelix-turn-helix domain-containing protein3e-0755.8
NC_013093:4247811:426232542623254263176852Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, XRE family6e-0755.1
NC_016111:4613599:461942546194254620279855Streptomyces cattleya NRRL 8057, complete genomeDNA-binding protein5e-0755.1
NC_013929:7278414:728707572870757287953879Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein5e-0755.1
NC_013510:4319296:433051643305164331355840Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, XRE family7e-0754.7
NC_016887:4403872:441600344160034416932930Nocardia cyriacigeorgica GUH-2, complete genomeputative DNA binding protein1e-0653.9
NC_013510:3117837:314071431407143141526813Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, XRE family1e-0653.9
NC_016582:4934854:494431449443144945195882Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein2e-0653.5
NC_003888:3111998:312209131220913122933843Streptomyces coelicolor A3(2), complete genomeregulatory protein1e-0653.5
NC_016582:5769080:577505757750575775887831Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative DNA-binding protein1e-0653.5
NC_014210:2277971:228780622878062288609804Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, XRE family2e-0653.1
NC_013595:8603188:862421786242178625092876Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, XRE family2e-0653.1
NC_014210:618500:636013636013636870858Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,helix-turn-helix domain protein4e-0652
NC_014391:4644500:465076246507624651649888Micromonospora aurantiaca ATCC 27029 chromosome, complete genomehelix-turn-helix domain-containing protein5e-0652
NC_016111:1546505:156168615616861562519834Streptomyces cattleya NRRL 8057, complete genomeDNA-binding protein6e-0651.6
NC_016887:55000:701527015270958807Nocardia cyriacigeorgica GUH-2, complete genomeputative DNA-binding protein7e-0651.6
NC_013510:2288746:229930422993042300185882Thermomonospora curvata DSM 43183, complete genomehelix-turn-helix domain protein7e-0651.2