Pre_GI Gene

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Host: NC_008278 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008278:132000 Frankia alni ACN14a, complete genome

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
132070132306237hypothetical protein putative signal peptideQuickGO ontology
132547132753207hypothetical protein
1331081341781071Valine dehydrogenase ValDHQuickGO ontologyBLASTP
134431135324894hypothetical protein
135534135683150Putative DNA-binding protein partialQuickGO ontologyBLASTP
136268137131864hypothetical proteinBLASTP
137459137626168hypothetical protein
137631138053423hypothetical proteinBLASTP
137956138375420Putative HTH-type transcriptional regulatorQuickGO ontology
138428138769342hypothetical proteinBLASTP
138766139257492hypothetical proteinBLASTP
139478140227750hypothetical protein putative membrane protein putative permease of ABC transporterQuickGO ontologyBLASTP
140329140775447Putative ABC-transport protein ATP-binding componentQuickGO ontologyBLASTP
141420142196777Putative DNA-binding proteinQuickGO ontologyBLASTP
142224143021798conserved hypothetical protein putative S-adenosyl-L-methionine-dependent methyltransferase domainQuickGO ontologyBLASTP
1431331442061074hypothetical proteinBLASTP
144323144637315Putative transposaseQuickGO ontologyBLASTP
145090145392303Putative dehydrogenase putative signal peptideQuickGO ontology
145403145675273hypothetical protein putative signal peptideQuickGO ontology
145888146715828conserved hypothetical protein putative S-adenosyl-L-methionine-dependent methyltransferase domainQuickGO ontologyBLASTP
146785147303519Putative RNA polymerase ECF-subfamily sigma factorQuickGO ontologyBLASTP
147300147914615Methylated-DNA--protein-cysteine methyltransferase 6-O-methylguanine-DNA methyltransferase O-6-methylguanine-DNA-alkyltransferaseQuickGO ontologyBLASTP
148083148817735putative short chain oxidoreductaseQuickGO ontologyBLASTP
1489721523013330putative NAD-specific glutamate dehydrogenase NAD-GDHQuickGO ontologyBLASTP