Pre_GI: BLASTP Hits

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Query: NC_006155:2208686:2217547 Yersinia pseudotuberculosis IP 32953, complete genome

Start: 2217547, End: 2217966, Length: 420

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a fully virulent serotype I strain isolated from a human patient. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010634:2124185:213380821338082134227420Yersinia pseudotuberculosis PB1/+, complete genomeputative bacteriophage integrase2e-78290
NC_020418:3022891:3035219303521930362321014Morganella morganii subsp. morganii KT, complete genomehypothetical protein2e-38157
NC_010634:2124185:213467621346762135008333Yersinia pseudotuberculosis PB1/+, complete genomeputative bacteriophage integrase6e-36149
NC_006155:2208686:221841522184152218747333Yersinia pseudotuberculosis IP 32953, complete genomeputative bacteriophage integrase6e-36149
NC_012917:2971702:2989228298922829902351008Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeintegrase family protein1e-35147
NC_009436:1466580:1474788147478814758071020Enterobacter sp. 638, complete genomephage integrase family protein4e-26116
NC_006155:2116834:2125870212587021269251056Yersinia pseudotuberculosis IP 32953, complete genomeputative integrase5e-26116
NC_011601:846358:8524468524468534981053Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeintegrase1e-25115
NC_012947:2898179:2908870290887029098861017Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeintegrase2e-25114
NC_014562:2871765:2877818287781828788311014Pantoea vagans C9-1 chromosome, complete genomeIntegrase2e-24110
NC_014306:1244721:1248024124802412490641041Erwinia billingiae Eb661, complete genomePhage integrase2e-23107
NC_015061:2770856:2782208278220827832631056Rahnella sp. Y9602 chromosome, complete genomeintegrase family protein2e-23107
NC_011742:2823000:2829972282997228309911020Escherichia coli S88 chromosome, complete genomeIntegrase5e-23106
NC_003198:4453457:4506245450624545072701026Salmonella enterica subsp. enterica serovar Typhi str. CT18,phage integrase1e-22105
NC_006511:2677964:2694468269446826954931026Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCphage integrase1e-22105
NC_011147:2676972:2690004269000426910291026Salmonella enterica subsp. enterica serovar Paratyphi A strphage integrase1e-22105
NC_020260:312805:3177533177533187661014Cronobacter sakazakii Sp291, complete genomephage integrase family site-specific recombinase9e-23105
NC_003197:2870268:2876815287681528778401026Salmonella typhimurium LT2, complete genomephage tail-like protein7e-23105
NC_011149:2802199:2819809281980928208341026Salmonella enterica subsp. enterica serovar Agona str. SL483,phage integrase7e-23105
NC_016860:2896254:2900381290038129014061026Salmonella enterica subsp. enterica serovar Typhimurium strphage integrase7e-23105
NC_009436:3807420:3813464381346438144741011Enterobacter sp. 638, complete genomephage integrase family protein2e-22104
NC_009348:1663870:1671623167162316726781056Aeromonas salmonicida subsp. salmonicida A449, complete genomephage integrase1e-22104
NC_009648:3803622:3833950383395038349571008Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative prophage gp Int for integrase1e-22104
NC_013282:3389619:3405674340567434066931020Cronobacter turicensis, complete genomeIntegrase2e-22103
NC_014500:894136:9154529154529165431092Dickeya dadantii 3937 chromosome, complete genomePhage integrase3e-22103
NC_013956:3525711:3543809354380935448551047Pantoea ananatis LMG 20103 chromosome, complete genomeInt3e-22103
NC_013592:804288:8183828183828194731092Dickeya dadantii Ech586, complete genomeintegrase family protein3e-22103
NC_011205:2938356:2955002295500229560271026Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853phage integrase1e-21102
NC_012917:3565268:3573374357337435744321059Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeintegrase family protein7e-22102
NC_010334:1561691:1587770158777015887951026Shewanella halifaxensis HAW-EB4, complete genomeintegrase family protein7e-22102
NC_017046:2869873:2886239288623928872641026Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage integrase1e-21101
NC_016857:2871689:2887497288749728885221026Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74phage integrase1e-21101
NC_016810:2871689:2887497288749728885221026Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage integrase1e-21101
NC_014837:3766426:3782586378258637836171032Pantoea sp. At-9b chromosome, complete genomeintegrase family protein3e-21100
NC_009784:253852:2589322589322599691038Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequencehypothetical protein9e-2095.5
NC_015061:596247:610563610563611561999Rahnella sp. Y9602 chromosome, complete genomeintegrase family protein9e-2095.5
NC_016845:4046142:4049987404998740510181032Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,gp274e-1993.6
NC_011080:2870428:2876970287697028779801011Salmonella enterica subsp. enterica serovar Newport str. SL254,phage integrase7e-1992.4
NC_010634:4001154:4001154400115440022091056Yersinia pseudotuberculosis PB1/+, complete genomeintegrase family protein1e-1891.3
NC_010694:614985:6282636282636292911029Erwinia tasmaniensis, complete genomeBacteriophage 186 integrase2e-1890.9
NC_009656:5185704:5191294519129451924091116Pseudomonas aeruginosa PA7 chromosome, complete genomeprophage CP-933T integrase4e-1889.7
NC_016745:1892500:190427419042741905233960Oceanimonas sp. GK1 chromosome, complete genomephage integrase6e-1889.4
NC_011147:2713937:2721297272129727223101014Salmonella enterica subsp. enterica serovar Paratyphi A strbacteriophage integrase1e-1685.1
NC_009348:4135002:4154791415479141558521062Aeromonas salmonicida subsp. salmonicida A449, complete genomephage integrase6e-1682.8
NC_015424:2726223:275214527521452753110966Aeromonas veronii B565 chromosome, complete genomephage integrase5e-1579.7
NC_015410:1324313:1339411133941113404391029Pseudomonas mendocina NK-01 chromosome, complete genomephage integrase family protein7e-1579.3
NC_012779:2127542:215020621502062151093888Edwardsiella ictaluri 93-146, complete genomeintegrase family protein7e-1579
NC_009656:5505413:552934455293445530342999Pseudomonas aeruginosa PA7 chromosome, complete genomeintegrase6e-1476.3
NC_008463:4342119:4345187434518743462031017Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative bacteriophage integrase9e-1475.5
NC_011770:4542183:4545251454525145462671017Pseudomonas aeruginosa LESB58, complete genomeputative bacteriophage integrase9e-1475.5
NC_012912:1701231:174294117429411743207267Dickeya zeae Ech1591, complete genomeputative integrase1e-1375.1
NC_015572:4618467:462460346246034625571969Methylomonas methanica MC09 chromosome, complete genomeintegrase family protein2e-1374.7
NC_018080:4436646:445010744501074451105999Pseudomonas aeruginosa DK2 chromosome, complete genomephage integrase family protein2e-1270.9
NC_016845:1773416:177839017783901779370981Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,integrase family protein3e-1270.5
NC_020181:5182568:519708851970885198047960Enterobacter aerogenes EA1509E, complete genomePhage integrase5e-1269.7
NC_015410:3502099:3522734352273435237531020Pseudomonas mendocina NK-01 chromosome, complete genomephage integrase family protein2e-1167.8
NC_015410:1202370:120237012023701203362993Pseudomonas mendocina NK-01 chromosome, complete genomeintegrase2e-1167.8
NC_007645:6858465:6867573686757368685861014Hahella chejuensis KCTC 2396, complete genomeIntegrase4e-1167
NC_002516:776787:795793795793796776984Pseudomonas aeruginosa PAO1, complete genomeprobable bacteriophage integrase1e-1065.1
NC_017047:4037674:4045316404531640463231008Rahnella aquatilis HX2 chromosome, complete genomephage integrase/recombinase2e-1064.3
NC_008800:1870596:188624818862481887231984Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,P2-like phage integrase3e-1063.9
NC_017506:3248724:324872432487243249707984Marinobacter adhaerens HP15 chromosome, complete genomephage integrase family protein6e-1062.8
NC_014306:103545:1064941064941075011008Erwinia billingiae Eb661, complete genomeSite-specific recombinase, phage integrase family7e-1062.4
NC_015061:1251905:126838412683841269370987Rahnella sp. Y9602 chromosome, complete genomeintegrase family protein5e-0959.7
NC_015410:2838132:285827228582722859261990Pseudomonas mendocina NK-01 chromosome, complete genomephage integrase family protein1e-0858.2
NC_009439:2337024:2338357233835723393641008Pseudomonas mendocina ymp, complete genomephage integrase family protein2e-0857.8
NC_016818:1605918:161022516102251611211987Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completesite-specific recombinase XerD3e-0857.4
NC_017047:1551836:155616615561661557152987Rahnella aquatilis HX2 chromosome, complete genomeintegrase family protein3e-0857.4
NC_015061:1598920:160325016032501604236987Rahnella sp. Y9602 chromosome, complete genomeintegrase family protein3e-0857.4
NC_009801:995396:100069410006941001689996Escherichia coli E24377A, complete genomesite-specific recombinase, phage integrase family4e-0856.6
NC_015410:1324313:133164413316441332582939Pseudomonas mendocina NK-01 chromosome, complete genomeputative integrase5e-0856.6
NC_013008:2824511:2837290283729028383031014Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeintegrase5e-0856.2
NC_011353:2825500:2838310283831028393231014Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeintegrase5e-0856.2
NC_012967:2105251:2121334212133421223471014Escherichia coli B str. REL606 chromosome, complete genomeintegrase2e-0754.7
NC_016514:2334870:2347317234731723483601044Enterobacter cloacae EcWSU1 chromosome, complete genometyrosine recombinase XerC9e-0752.4
NC_016628:373815:3804163804163814201005Vibrio furnissii NCTC 11218 chromosome 2, complete sequencebacteriophage integrase3e-0650.4