Pre_GI Gene

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Host: NC_009656 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009656:5185704 Pseudomonas aeruginosa PA7 chromosome, complete genome

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Non-respiratory clinical isolate from Argentina. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
51857045186276573hypothetical protein
51862635186790528hypothetical proteinBLASTP
51867905187515726ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
518774251892351494RNA polymerase factor sigma-54QuickGO ontologyBLASTP
51893135189621309hypothetical proteinBLASTP
51896355190099465nitrogen regulatory IIA proteinQuickGO ontologyBLASTP
51901015190961861hypothetical proteinBLASTP
51909915191263273phosphocarrier protein HPrQuickGO ontologyBLASTP
519129451924091116prophage CP-933T integraseQuickGO ontologyBLASTP
51924145192650237hypothetical proteinBLASTP
51927455192975231hypothetical protein
519298651956792694phage proteinQuickGO ontologyBLASTP
51961105196310201hypothetical protein
51962825196683402hypothetical protein
51966995197055357hypothetical protein
51975235197738216hypothetical proteinBLASTP
51977355197965231hypothetical protein
51979625198243282hypothetical protein
51986025198811210hypothetical protein
51990935199800708PBSX family phage portal proteinQuickGO ontologyBLASTP
519985952019072049hypothetical proteinBLASTP
520187352030181146scaffoldQuickGO ontologyBLASTP
520301852040401023P2 family phage major capsid proteinQuickGO ontologyBLASTP
52040375204774738putative terminase endonuclease subunitQuickGO ontologyBLASTP
52048725205333462phage head completion proteinQuickGO ontologyBLASTP
52053355205772438putative tail proteinQuickGO ontologyBLASTP
52057655206430666putative virion morphogenesis proteinQuickGO ontologyBLASTP
520644252075571116tail sheathQuickGO ontologyBLASTP
52075615208010450tail tubeQuickGO ontologyBLASTP
52080105208219210hypothetical proteinBLASTP