Pre_GI: BLASTP Hits

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Query: NC_005139:518760:526385 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 526385, End: 527158, Length: 774

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010067:1116148:112565511256551126425771Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-61235
NC_012962:869295:882634882634883419786Photorhabdus asymbiotica, complete genomepts system, n-acetylgalactosamine-specific iic component 1 (eiic-aga (n-acetylgalactosamine-permease iic component 1)3e-59228
NC_017328:3289853:3311322331132233127791458Shigella flexneri 2002017 chromosome, complete genomePTS system N-acetylgalactosamine-specific transporter subunit IID5e-52204
NC_004337:3249791:327125932712593272038780Shigella flexneri 2a str. 301, complete genomeN-acetylgalactosameine-specific IIC component 24e-51201
NC_012967:3191319:321362932136293214408780Escherichia coli B str. REL606 chromosome, complete genomeN-acetylgalactosamine-specific PTS system transporter subunit IIC8e-51200
CP002185:3475991:349840534984053499184780Escherichia coli W, complete genomeN-acetylgalactosamine-specific IIC component8e-51200
NC_016023:875416:884578884578885378801Bacillus coagulans 36D1 chromosome, complete genomePTS system sorbose-specific transporter subunit IIC9e-34144
NC_011294:4604283:462807446280744628853780Salmonella enterica subsp. enterica serovar Enteritidis strPTS system transporter subunit C9e-32137
NC_020063:4653422:466878846687884669588801Enterobacteriaceae bacterium strain FGI 57, complete genomephosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC2e-28125
NC_015425:841754:854861854861855679819Clostridium botulinum BKT015925 chromosome, complete genomePTS system mannose/fructose/sorbose family transporter subunit IIC2e-28125
NC_014376:4369666:436966643696664370448783Clostridium saccharolyticum WM1 chromosome, complete genomephosphotransferase system PTS sorbose-specific IIC subunit3e-26119
NC_008526:343445:3656743656743672721599Lactobacillus casei ATCC 334, complete genomeMannose-specific PTS system component IICD5e-26118
NC_014334:2696000:2706521270652127082151695Lactobacillus casei str. Zhang chromosome, complete genomePTS system mannose-specific transporter subunit IICD9e-26117
NC_015424:2357600:237913023791302379915786Aeromonas veronii B565 chromosome, complete genomePTS system, IIC component7e-26117
NC_009442:1158268:116523911652391166015777Streptococcus suis 05ZYH33 chromosome, complete genomephosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC1e-25116
NC_010473:3354052:337646833764683376869402Escherichia coli str. K-12 substr. DH10B, complete genome3e-25115
AC_000091:3258377:328055632805563280957402Escherichia coli W3110 DNA, complete genome3e-25115
NC_013198:394000:4184674184674201551689Lactobacillus rhamnosus GG, complete genomePTS system, mannose-specific IICD component4e-25115
NC_013199:392450:411874411874412707834Lactobacillus rhamnosus Lc 705, complete genomePTS system, mannose-specific IIC component (ManY)2e-24112
NC_009792:4693152:471072147107214711470750Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-22105
NC_015519:270637:288540288540289301762Tepidanaerobacter sp. Re1 chromosome, complete genomephosphotransferase system PTS sorbose-specific IIC subunit5e-22104
NC_013192:2434664:245282124528212453636816Leptotrichia buccalis DSM 1135, complete genomePTS system, mannose/fructose/sorbose family, IIC subunit8e-22103
NC_004631:3841975:386302638630263863775750Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative PTS system protein2e-21102
NC_003198:3855157:387753638775363878285750Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative PTS system protein2e-21102
NC_011149:4474012:449065744906574491406750Salmonella enterica subsp. enterica serovar Agona str. SL483,2e-2099.4
NC_011134:1222739:122536912253691226178810Streptococcus equi subsp. zooepidemicus str. MGCS10565, completemannose permease IIC component ManY8e-2097.4
NC_015389:1977736:200605120060512006845795Coriobacterium glomerans PW2 chromosome, complete genomephosphotransferase system PTS sorbose-specific IIC subunit1e-1893.6
NC_016023:1769925:178731617873161788116801Bacillus coagulans 36D1 chromosome, complete genomePTS system sorbose-specific transporter subunit IIC1e-1893.6
NC_009617:4436837:445130444513044452095792Clostridium beijerinckii NCIMB 8052 chromosome, complete genomePTS system mannose/fructose/sorbose family transporter subunit IIC2e-1892.8
NC_011742:3799788:381028038102803811026747Escherichia coli S88 chromosome, complete genomephosphotransferase system enzyme IIC4e-1788.6
NC_008563:3888232:389553238955323896278747Escherichia coli APEC O1, complete genomehypothetical protein4e-1788.6
NC_007946:3855445:386274538627453863491747Escherichia coli UTI89, complete genomeputative phosphotransferase system protein4e-1788.6
NC_015061:3147691:314874431487443149541798Rahnella sp. Y9602 chromosome, complete genomePTS system, mannose/fructose/sorbose family, IIC subunit3e-1685.5
NC_016818:3148000:314928031492803150077798Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completePTS system mannose/fructose/sorbose family transporter subunit IIC3e-1685.5
NC_017047:3212000:321334632133463214143798Rahnella aquatilis HX2 chromosome, complete genomePTS system mannose-specific transporter subunit IIC3e-1685.5
NC_015389:1782825:179732317973231798201879Coriobacterium glomerans PW2 chromosome, complete genomephosphotransferase system PTS sorbose-specific IIC subunit2e-1582.8
NC_012880:2399205:240237424023742403171798Dickeya dadantii Ech703, complete genomePTS system, mannose/fructose/sorbose family, IIC subunit4e-1582
NC_009089:581655:582611582611583369759Clostridium difficile 630, complete genomePTS system, IIc component2e-1479.7
NC_016612:2902628:292909729290972929897801Klebsiella oxytoca KCTC 1686 chromosome, complete genomePTS system mannose-specific transporter subunit IIC4e-1478.6
NC_011660:2509362:251733925173392518145807Listeria monocytogenes HCC23 chromosome, complete genomePTS system fructose-specific transporter subunit IIC2e-1376.3
NC_014377:1897857:191013919101391910918780Thermosediminibacter oceani DSM 16646 chromosome, complete genomephosphotransferase system PTS sorbose-specific IIC subunit3e-1375.9
NC_008530:1775841:178103617810361781839804Lactobacillus gasseri ATCC 33323, complete genomemannose-specific PTS system component IIC4e-1375.1
NC_005362:1870620:187723618772361878039804Lactobacillus johnsonii NCC 533, complete genomephosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probable mannose specific5e-1374.7
NC_013504:1648551:165622716562271657030804Lactobacillus johnsonii FI9785 chromosome, complete genomephosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, probably mannose specific8e-1374.3
NC_010380:124655:146292146292147197906Streptococcus pneumoniae Hungary19A-6, complete genomephosphotransferase system sugar-specific eiic component2e-1273.2
NC_013192:469771:484469484469485275807Leptotrichia buccalis DSM 1135, complete genomephosphotransferase system PTS sorbose-specific IIC subunit3e-1272.4
NC_010723:1379256:139888813988881399691804Clostridium botulinum E3 str. Alaska E43, complete genomePTS system sorbose-specific iic component7e-1271.2
NC_015975:1936504:195133419513341952143810Lactobacillus ruminis ATCC 27782 chromosome, complete genomePTS family mannose/fructose/sorbose porter component IIC3e-1168.9
NC_014724:439594:476266476266477078813Lactobacillus amylovorus GRL 1112 chromosome, complete genomemannose-specific PTS system component IIC4e-1065.5
NC_015214:437733:475881475881476693813Lactobacillus acidophilus 30SC chromosome, complete genomePTS system mannose-specific transporter subunit IIC4e-1065.5
NC_006814:403723:440509440509441330822Lactobacillus acidophilus NCFM, complete genomemannose-specific PTS system component IIC2e-0963.2
NC_018528:1681060:168828016882801689092813Lactobacillus helveticus R0052 chromosome, complete genomePTS system mannose-specific transporter subunit IIC3e-0858.9
NC_014106:419511:451723451723452532810Lactobacillus crispatus ST1, complete genomePTS system, mannose-specific IIC component1e-0757
NC_015602:1339067:134521013452101346019810Lactobacillus kefiranofaciens ZW3 chromosome, complete genomePTS system, mannose-specific IIC component2e-0756.6
NC_015389:809474:816754816754817578825Coriobacterium glomerans PW2 chromosome, complete genomephosphotransferase system PTS sorbose-specific IIC subunit3e-0755.8