Pre_GI: BLASTP Hits

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Query: NC_005126:3485330:3485330 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 3485330, End: 3485947, Length: 618

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012962:1827000:184449118444911845108618Photorhabdus asymbiotica, complete genomealpha-ribazole-5'-phosphate phosphatase1e-79295
NC_014654:302000:321570321570322190621Halanaerobium sp. 'sapolanicus' chromosome, complete genomePhosphoglycerate mutase3e-1788.2
NC_017295:1507956:152650315265031527078576Clostridium acetobutylicum EA 2018 chromosome, complete genomeAlpha-ribazole-5'-phosphate phosphatase, CobC4e-1787.8
NC_003030:1510000:152708915270891527664576Clostridium acetobutylicum ATCC 824, complete genomeAlpha-ribazole-5'-phosphate phosphatase, CobC4e-1787.8
NC_015687:1508664:152869015286901529265576Clostridium acetobutylicum DSM 1731 chromosome, complete genomealpha-ribazole-5'-phosphate phosphatase, CobC4e-1787.8
NC_016148:576946:580073580073580726654Thermovirga lienii DSM 17291 chromosome, complete genomephosphoglycerate mutase1e-1686.7
NC_010407:3174470:317556131755613176313753Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative phosphoglycerate mutase1e-1583.2
NC_015520:224136:232085232085232681597Mahella australiensis 50-1 BON chromosome, complete genomephosphoglycerate mutase2e-1582.8
NC_014632:567289:579421579421580011591Ilyobacter polytropus DSM 2926 chromosome, complete genomephosphoglycerate mutase1e-1582.8
NC_016751:1700164:171478017147801715331552Marinitoga piezophila KA3 chromosome, complete genomealpha-ribazole phosphatase2e-1582.4
NC_012488:1159463:116150511615051162080576Listeria monocytogenes Clip81459, complete genomealpha-ribazole-5'-phosphatase3e-1582
NC_015634:2492771:249465324946532495273621Bacillus coagulans 2-6 chromosome, complete genomephosphoglycerate mutase3e-1581.6
NC_016148:141011:155390155390156040651Thermovirga lienii DSM 17291 chromosome, complete genomephosphoglycerate mutase8e-1477
NC_015437:1038476:104379310437931044422630Selenomonas sputigena ATCC 35185 chromosome, complete genomePhosphoglycerate mutase1e-1376.6
NC_014328:2643588:264869826486982649285588Clostridium ljungdahlii ATCC 49587 chromosome, complete genomefructose-2,6-bisphosphatase1e-1376.3
NC_014650:2500817:251810025181002518738639Geobacillus sp. Y4.1MC1 chromosome, complete genomephosphoglycerate mutase2e-1375.9
NC_004557:2777291:278442427844242785065642Clostridium tetani E88, complete genomephosphoglycerate mutase3e-1375.1
NC_012438:192065:207795207795208415621Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomephosphoglycerate mutase4e-1374.7
NC_014363:427393:448600448600449223624Olsenella uli DSM 7084 chromosome, complete genomePhosphoglycerate mutase5e-1374.3
NC_006510:1501487:150620815062081506846639Geobacillus kaustophilus HTA426, complete genomephosphoglycerate mutase6e-1373.9
NC_021171:415771:435985435985436596612Bacillus sp. 1NLA3E, complete genomealpha-ribazole phosphatase1e-1273.2
NC_013165:1407000:142850114285011429145645Slackia heliotrinireducens DSM 20476, complete genomefructose-2,6-bisphosphatase3e-1271.6
NC_016513:1529691:153201315320131532654642Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completephosphoglycerate mutase family protein3e-1271.6
NC_011757:1553500:157309015730901573728639Methylobacterium chloromethanicum CM4, complete genomephosphoglycerate mutase 1 family3e-1271.6
NC_012988:1817000:183663818366381837276639Methylobacterium extorquens DM4, complete genomephosphoglyceromutase3e-1271.6
NC_013216:3625830:362922536292253629830606Desulfotomaculum acetoxidans DSM 771, complete genomePhosphoglycerate mutase5e-1270.9
NC_014655:379937:391353391353391940588Leadbetterella byssophila DSM 17132 chromosome, complete genomephosphoglycerate mutase5e-1270.9
NC_013766:1202713:120346012034601204035576Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein8e-1270.5
NC_011837:165913:180513180513181148636Clostridium kluyveri NBRC 12016, complete genomehypothetical protein1e-1169.7
NC_009706:165913:180513180513181148636Clostridium kluyveri DSM 555 chromosome, complete genomeprotein CobC11e-1169.7
NC_015145:4232283:423170242317024232286585Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomefructose-2,6-bisphosphatase2e-1169.3
NC_012491:1263469:126924912692491269881633Brevibacillus brevis NBRC 100599, complete genomealpha-ribazole phosphatase2e-1168.9
NC_017955:2494640:254403725440372544738702Modestobacter marinus, complete genomephosphoglycerate mutase2e-1168.6
NC_009617:1487110:149948014994801500088609Clostridium beijerinckii NCIMB 8052 chromosome, complete genomephosphoglycerate mutase4e-1168.2
NC_016627:2723678:273140727314072732099693Clostridium clariflavum DSM 19732 chromosome, complete genomefructose-2,6-bisphosphatase4e-1167.8
NC_015737:449914:455361455361455912552Clostridium sp. SY8519, complete genomefructose-2,6-bisphosphatase4e-1167.8
NC_008595:2215244:2215244221524422163951152Mycobacterium avium 104, complete genomephosphoglycerate mutase1e-1066.6
NC_008095:6877388:687882668788266879434609Myxococcus xanthus DK 1622, complete genomeputative 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase1e-1066.6
NC_008261:64678:932619326193884624Clostridium perfringens ATCC 13124, complete genomephosphoglycerate mutase family protein1e-1066.6
NC_015635:3860570:389086438908643891490627Microlunatus phosphovorus NM-1, complete genomephosphoglycerate mutase family protein1e-1066.6
NC_011886:4376261:437568043756804376264585Arthrobacter chlorophenolicus A6, complete genomePhosphoglycerate mutase1e-1066.2
NC_020291:1593143:160569816056981606303606Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomefructose-2,6-bisphosphatase2e-1065.9
NC_013192:232778:268893268893269537645Leptotrichia buccalis DSM 1135, complete genomePhosphoglycerate mutase2e-1065.9
NC_010506:4951500:495902249590224959669648Shewanella woodyi ATCC 51908, complete genomePhosphoglycerate mutase3e-1065.5
NC_013159:2098500:213388721338872134591705Saccharomonospora viridis DSM 43017, complete genomefructose-2,6-bisphosphatase3e-1065.5
NC_014614:1259236:125863812586381259243606Clostridium sticklandii, complete genomeputative cobalamin biosynthesis phosphoglycerate mutase4e-1064.7
NC_014246:1545214:154658415465841547219636Mobiluncus curtisii ATCC 43063 chromosome, complete genomeputative phosphoglycerate mutase4e-1064.7
NC_020126:7896447:791296679129667913574609Myxococcus stipitatus DSM 14675, complete genome2,3-bisphosphoglycerate-independent phosphoglycerate mutase4e-1064.7
NC_013517:1055854:108639810863981087003606Sebaldella termitidis ATCC 33386, complete genomePhosphoglycerate mutase6e-1064.3
NC_017093:1411532:1415914141591414170231110Actinoplanes missouriensis 431, complete genomeputative bifunctional ribonuclease H/phosphoglycerate mutase8e-1063.9
NC_012779:610509:613554613554614201648Edwardsiella ictaluri 93-146, complete genomeputative phosphoglycerate mutase gpmb (pgam)7e-1063.9
NC_008554:1623041:1626812162681216285871776Syntrophobacter fumaroxidans MPOB, complete genomemetal dependent phosphohydrolase9e-1063.5
NC_014657:1193985:119656011965601197174615Caldicellulosiruptor owensensis OL chromosome, complete genomephosphoglycerate mutase9e-1063.5
NC_006156:685344:699508699508700254747Borrelia garinii PBi chromosome linear, complete sequencephosphoglycerate mutase1e-0963.2
NC_013510:1786194:178855517885551789241687Thermomonospora curvata DSM 43183, complete genomePhosphoglycerate mutase1e-0963.2
NC_013510:4484000:449662244966224497320699Thermomonospora curvata DSM 43183, complete genomePhosphoglycerate mutase2e-0962.4
NC_009831:4539952:454590145459014546587687Shewanella sediminis HAW-EB3, complete genomephosphoglycerate mutase2e-0962.4
NC_010673:703816:703816703816704562747Borrelia hermsii DAH, complete genomephosphoglycerate mutase2e-0962
NC_020409:1956485:196108519610851961690606Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completePhosphoglycerate mutase2e-0962
NC_002488:1775629:179165817916581792302645Xylella fastidiosa 9a5c, complete genomephosphoglycerate mutase4e-0961.2
NC_010999:2155714:217711721771172177755639Lactobacillus casei, complete genomePhosphoglycerate mutase4e-0961.2
NC_017095:166896:176460176460177086627Fervidobacterium pennivorans DSM 9078 chromosome, complete genomefructose-2,6-bisphosphatase4e-0961.2
NC_014334:1954333:197749219774921978130639Lactobacillus casei str. Zhang chromosome, complete genomephosphoglycerate mutase family protein4e-0961.2
NC_010513:1162232:116669111666911167335645Xylella fastidiosa M12 chromosome, complete genomephosphoglycerate mutase5e-0961.2
NC_015978:352478:357064357064357762699Lactobacillus sanfranciscensis TMW 1.1304 chromosome, complete2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 26e-0960.8
NC_012803:1094679:109748710974871098152666Micrococcus luteus NCTC 2665, complete genomefructose-2,6-bisphosphatase1e-0860.1
NC_009513:169146:173678173678174364687Lactobacillus reuteri F275, complete genomephosphoglycerate mutase1e-0859.7
NC_015697:1295412:129990012999001300586687Lactobacillus reuteri SD2112 chromosome, complete genomephosphoglycerate mutase1e-0859.7
NC_011894:2747491:275266027526602753301642Methylobacterium nodulans ORS 2060, complete genomephosphoglycerate mutase 1 family2e-0859.3
NC_017068:1327025:132878313287831329394612Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative alpha-ribazole phosphatase2e-0858.9
NC_013199:1150000:116850411685041168878375Lactobacillus rhamnosus Lc 705, complete genomephosphoglycerate mutase2e-0858.9
NC_015656:1830220:183360018336001834328729Frankia symbiont of Datisca glomerata chromosome, complete genomephosphoglycerate mutase2e-0858.9
NC_016630:1462788:147577714757771476403627Filifactor alocis ATCC 35896 chromosome, complete genomephosphoglycerate mutase3e-0858.5
NC_013199:2058857:208368020836802084318639Lactobacillus rhamnosus Lc 705, complete genomephosphoglycerate mutase family protein3e-0858.5
NC_013198:2088780:211269821126982113336639Lactobacillus rhamnosus GG, complete genomephosphoglycerate mutase family protein3e-0858.5
NC_020304:2107979:210915121091512109813663Desulfocapsa sulfexigens DSM 10523, complete genomefructose-2,6-bisphosphatase3e-0858.5
NC_006677:1052031:105855210585521059211660Gluconobacter oxydans 621H, complete genomeProbable phosphoglycerate mutase 24e-0858.2
NC_012778:364728:376127376127376663537Eubacterium eligens ATCC 27750, complete genomephosphoglycerate mutase5e-0857.8
NC_015953:5908467:591078259107825911408627Streptomyces sp. SirexAA-E chromosome, complete genomephosphoglycerate mutase5e-0857.8
NC_012470:1390285:139533113953311395975645Streptococcus equi subsp. zooepidemicus, complete genomephosphoglycerate mutase family protein5e-0857.8
NC_010524:3914880:392725439272543927997744Leptothrix cholodnii SP-6, complete genomephosphoglycerate mutase 1 family6e-0857.4
NC_009614:2431005:244009124400912440609519Bacteroides vulgatus ATCC 8482 chromosome, complete genomephosphoglycerate mutase6e-0857.4
NC_020209:1986503:201716420171642017904741Pseudomonas poae RE*1-1-14, complete genomephosphoglycerate mutase8e-0857
NC_009648:838000:854248854248855000753Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomephosphoglyceromutase9e-0857
NC_014622:1514416:151966415196641520416753Paenibacillus polymyxa SC2 chromosome, complete genomephosphoglycerate mutase1e-0756.6
NC_011205:839425:860544860544861296753Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853phosphoglyceromutase1e-0756.6
NC_016818:633750:652021652021652674654Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completefructose-2,6-bisphosphatase1e-0756.6
NC_006905:848000:865001865001865753753Salmonella enterica subsp. enterica serovar Choleraesuis strphosphoglyceromutase2e-0756.2
NC_011080:819103:840714840714841466753Salmonella enterica subsp. enterica serovar Newport str. SL254,2,3-bisphosphoglycerate-dependent phosphoglycerate mutase2e-0756.2
NC_012125:793812:813561813561814313753Salmonella enterica subsp. enterica serovar Paratyphi C strainphosphoglyceromutase2e-0756.2
NC_012947:3015985:303638230363823037134753Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completephosphoglyceromutase2e-0756.2
NC_003197:815964:836363836363837115753Salmonella typhimurium LT2, complete genomephosphoglyceromutase2e-0755.8
NC_011083:862901:884631884631885383753Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,2,3-bisphosphoglycerate-dependent phosphoglycerate mutase2e-0755.8
NC_011149:779903:800022800022800774753Salmonella enterica subsp. enterica serovar Agona str. SL483,2,3-bisphosphoglycerate-dependent phosphoglycerate mutase2e-0755.8
NC_011274:793681:813373813373814125753Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91phosphoglyceromutase2e-0755.8
NC_011294:781170:795511795511796263753Salmonella enterica subsp. enterica serovar Enteritidis strphosphoglyceromutase2e-0755.8
NC_016810:819489:835617835617836369753Salmonella enterica subsp. enterica serovar Typhimurium strphosphoglycerate mutase2e-0755.8
NC_016856:819482:836703836703837455753Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sphosphoglyceromutase2e-0755.8
NC_016857:819429:835617835617836369753Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74phosphoglyceromutase2e-0755.8
NC_016860:857500:875191875191875943753Salmonella enterica subsp. enterica serovar Typhimurium strphosphoglycerate mutase2e-0755.8
NC_016863:819478:836703836703837455753Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1phosphoglyceromutase2e-0755.8
NC_017046:819414:835605835605836357753Salmonella enterica subsp. enterica serovar Typhimurium str. 798phosphoglycerate mutase2e-0755.8
NC_014844:3582677:359560035956003596292693Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomephosphoglycerate mutase2e-0755.8
NC_011026:2533017:257603725760372576786750Chloroherpeton thalassium ATCC 35110, complete genomephosphoglycerate mutase 1 family2e-0755.5
NC_013203:472679:493285493285494046762Atopobium parvulum DSM 20469, complete genomephosphoglycerate mutase 1 family2e-0755.5
NC_011898:702983:716250716250716936687Clostridium cellulolyticum H10, complete genomePhosphoglycerate mutase2e-0755.5
NC_011663:1159070:117761011776101178329720Shewanella baltica OS223 chromosome, complete genomephosphoglycerate mutase3e-0755.1
NC_007481:3167434:318861131886113189225615Pseudoalteromonas haloplanktis TAC125 chromosome I, completeenzymatic protein3e-0755.1
NC_014483:1376500:138184813818481382654807Paenibacillus polymyxa E681 chromosome, complete genomeFructose-2,6-bisphosphatase3e-0755.1
NC_002578:877609:881255881255881827573Thermoplasma acidophilum DSM 1728, complete genomehypothetical protein4e-0754.7
NC_012988:1777618:180088418008841801237354Methylobacterium extorquens DM4, complete genomephosphoglycerate/bisphosphoglycerate mutase4e-0754.7
NC_018750:3741581:376592337659233766558636Streptomyces venezuelae ATCC 10712, complete genomeisomerase5e-0754.3
NC_009142:3943829:395628339562833957017735Saccharopolyspora erythraea NRRL 2338, complete genomephosphoglycerate mutase7e-0753.9
NC_008095:7499255:751347875134787514083606Myxococcus xanthus DK 1622, complete genomephosphoglycerate mutase family protein1e-0653.5
NC_014364:1116439:114962111496211150238618Spirochaeta smaragdinae DSM 11293 chromosome, complete genomePhosphoglycerate mutase8e-0753.5
NC_015436:474710:498161498161498910750Spirochaeta coccoides DSM 17374 chromosome, complete genomephosphoglycerate mutase8e-0753.5
NC_003116:1734000:174539517453951746078684Neisseria meningitidis Z2491, complete genomephosphoglyceromutase1e-0653.1
NC_009719:336000:3521183521183532871170Parvibaculum lavamentivorans DS-1 chromosome, complete genomephosphoglycerate mutase1e-0653.1
NC_008309:1628939:163173416317341632417684Haemophilus somnus 129PT, complete genome2,3-bisphosphoglycerate-dependent phosphoglycerate mutase1e-0653.1
NC_015975:267994:273250273250273873624Lactobacillus ruminis ATCC 27782 chromosome, complete genomephosphoglycerate mutase2e-0652.8
NC_008278:5855401:585655158565515857315765Frankia alni ACN14a, complete genome2,3-PDG dependent phosphoglycerate mutase2e-0652.8
NC_015953:1983821:1996606199660619978471242Streptomyces sp. SirexAA-E chromosome, complete genomephosphoglycerate mutase2e-0652.4
NC_012913:2074126:207469220746922075375684Aggregatibacter aphrophilus NJ8700, complete genome2,3-bisphosphoglycerate-dependent phosphoglycerate mutase2e-0652.4
NC_015726:2923969:294353629435362944126591Cupriavidus necator N-1 chromosome 1, complete sequencephosphoglycerate mutase2e-0652.4
NC_016941:807155:847107847107847688582Staphylococcus aureus subsp. aureus MSHR1132, complete genomephosphoglycerate mutase family protein2e-0652.4
NC_011126:1430608:143611314361131436856744Hydrogenobaculum sp. Y04AAS1, complete genomephosphoglycerate mutase 1 family2e-0652
NC_015557:1412917:141841314184131419156744Hydrogenobaculum sp. 3684 chromosome, complete genomephosphoglycerate mutase 1 family3e-0652
NC_015587:1414304:141828114182811419024744Hydrogenobaculum sp. SHO chromosome, complete genome2,3-bisphosphoglycerate-dependent phosphoglycerate mutase3e-0652
NC_018524:444217:449578449578450201624Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomehistidine phosphatase super family protein3e-0652
NC_020995:751311:751311751311751952642Enterococcus casseliflavus EC20, complete genomehypothetical protein4e-0651.6
NC_015978:412856:438783438783439484702Lactobacillus sanfranciscensis TMW 1.1304 chromosome, complete2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 16e-0650.8