Pre_GI Gene

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Host: NC_015975 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015975:267994 Lactobacillus ruminis ATCC 27782 chromosome, complete genome

Host Lineage: Lactobacillus ruminis; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This organism was isolated from bovine rumen. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
267994268821828hypothetical protein
268919269455537Rrf2 family transcriptional regulatorQuickGO ontologyBLASTP
2698352712801446Lysine-specific permeaseQuickGO ontologyBLASTP
2719142731881275Seryl-tRNA synthetaseQuickGO ontologyBLASTP
273250273873624phosphoglycerate mutaseQuickGO ontologyBLASTP
27605527612773tRNA-AlaQuickGO ontologyBLASTP
2792842793941115S ribosomal RNAQuickGO ontologyBLASTP
27941027948273tRNA-ValQuickGO ontologyBLASTP
27948827956073tRNA-LysQuickGO ontology
27967027974576tRNA-ThrQuickGO ontologyBLASTP
27995528002874tRNA-ArgQuickGO ontologyBLASTP
28006328013674tRNA-ProQuickGO ontology
28028428035774tRNA-ProQuickGO ontology
280758281225468transcriptional regulatorQuickGO ontologyBLASTP
2812522837562505ATP-binding Clp protease subunitQuickGO ontologyBLASTP
283862284266405hypothetical protein
2845172881013585DNA-directed RNA polymerase subunit betaQuickGO ontologyBLASTP