Pre_GI Gene

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Host: NC_007481 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007481:3167434 Pseudoalteromonas haloplanktis TAC125 chromosome I, complete

Host Lineage: Pseudoalteromonas haloplanktis; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a sample of coastal sea water near a French Antarctic station. This organism is adapted to growth at low temperatures and reactive oxygen species by a number of putative dioxygenases and fatty acid desaturases amongst other proteins. The organism can grow optimally in salt concentrations of 1.5 to 3.5% NaCl.The genome consists of 2 chromosomes, one of which may replicate unidirectionally. Some interesting features of this genome include the lack of the nucleoid-associated gene hns, a lack of genes involved in molybdopterin metabolism, a lack of the cAMP-CAP complex, and a lack of the PEP-dependent PTS system.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
316743431696832250cold-shock RNAse RQuickGO ontologyBLASTP
31698263170086261hypothetical proteinBLASTP
317017031714741305DEAD-box protein ATP-dependent RNA helicase with P-loop hydrolase domainQuickGO ontologyBLASTP
31716663172046381hypothetical protein
31720513172659609hypothetical proteinBLASTP
317264931758883240ATP-binding proteinQuickGO ontologyBLASTP
31758883176850963hypothetical proteinBLASTP
317686031791152256hypothetical proteinBLASTP
31791243180074951hypothetical proteinBLASTP
31803723181232861hypothetical proteinBLASTP
31815473181870324hypothetical proteinBLASTP
31818133182559747hypothetical proteinBLASTP
318269231845121821L-glutamineD-fructose-6-phosphate aminotransferaseQuickGO ontologyBLASTP
31845733185271699transcriptional regulatorQuickGO ontologyBLASTP
31854963186023528carbohydrate o-acetyltransferaseQuickGO ontologyBLASTP
31861093186636528adenosylcobalamin biosynthesis proteinQuickGO ontologyBLASTP
31866333187457825cobalamin 5-phosphate synthaseQuickGO ontologyBLASTP
318745931885201062nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferaseQuickGO ontologyBLASTP
31886113189225615enzymatic proteinQuickGO ontologyBLASTP