Pre_GI Gene

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Host: NC_012125 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012125:793812 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
7938127951161305translocation protein TolBQuickGO ontologyBLASTP
795127795675549peptidoglycan-associated outer membrane lipoproteinQuickGO ontologyBLASTP
795685796473789tol-pal system protein YbgFQuickGO ontologyBLASTP
79663879671376tRNA-LysQuickGO ontologyBLASTP
79685379692876tRNA-LysQuickGO ontologyBLASTP
79706379713876tRNA-LysQuickGO ontologyBLASTP
7973737984761104quinolinate synthetaseQuickGO ontologyBLASTP
798501799220720pnuC proteinQuickGO ontologyBLASTP
799217800155939zinc transporter ZitBQuickGO ontologyBLASTP
800266800652387hypothetical proteinBLASTP
8009728020241053phospho-2-dehydro-3-deoxyheptonate aldolaseQuickGO ontologyBLASTP
802118802663546fumarate hydrataseQuickGO ontologyBLASTP
802678803523846fumarate hydrataseQuickGO ontologyBLASTP
803653804543891transcriptional regulatorQuickGO ontologyBLASTP
8057508070181269cation transporterQuickGO ontologyBLASTP
807068807310243oxaloacetate decarboxylase subunit gammaQuickGO ontologyBLASTP
8073268091011776oxaloacetate decarboxylaseQuickGO ontologyBLASTP
8091178104181302oxaloacetate decarboxylase subunit betaQuickGO ontologyBLASTP
810537811235699cytoplasmic proteinQuickGO ontologyBLASTP
8116158126941080ABC transporter permeaseQuickGO ontologyBLASTP
812694813470777ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
813561814313753phosphoglyceromutaseQuickGO ontologyBLASTP
8145378155771041aldose 1-epimeraseQuickGO ontologyBLASTP
8155718167191149galactokinaseQuickGO ontologyBLASTP