Pre_GI: BLASTP Hits

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Query: NC_004578:3193490:3224146 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 3224146, End: 3224934, Length: 789

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011751:1770376:179225417922541793057804Escherichia coli UMN026 chromosome, complete genomeputative carboxymuconolactone decarboxylase5e-75280
NC_015856:3536441:354329635432963544132837Collimonas fungivorans Ter331 chromosome, complete genome4-carboxymuconolactone decarboxylase1e-72273
NC_013850:2357608:237512323751232375899777Klebsiella variicola At-22 chromosome, complete genomeCarboxymuconolactone decarboxylase4e-72271
NC_011283:785973:801947801947802750804Klebsiella pneumoniae 342 chromosome, complete genomecarboxymuconolactone decarboxylase family protein1e-71270
NC_021066:1778000:178243317824331783269837Raoultella ornithinolytica B6, complete genomeputative carboxymuconolactone decarboxylase3e-71268
NC_003295:659837:678246678246678974729Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSMEMBRANE PROTEIN3e-41168
NC_011886:2369980:237783723778372378160324Arthrobacter chlorophenolicus A6, complete genomeCarboxymuconolactone decarboxylase5e-22105
NC_013929:5431954:544546154454615445790330Streptomyces scabiei 87.22 chromosome, complete genomecarboxymuconolactone decarboxylase family protein1e-20100
NC_020409:1173796:119486411948641195268405Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeCarboxymuconolactone decarboxylase5e-2098.2
NC_014838:175939:195049195049195357309Pantoea sp. At-9b plasmid pPAT9B01, complete sequenceCarboxymuconolactone decarboxylase6e-2097.8
NC_006155:2334122:234714923471492347571423Yersinia pseudotuberculosis IP 32953, complete genomeputative decarboxylase4e-1995.5
NC_010634:2252329:226535622653562265778423Yersinia pseudotuberculosis PB1/+, complete genomecarboxymuconolactone decarboxylase4e-1995.5
NC_008149:1669921:168295916829591683381423Yersinia pestis Nepal516, complete genomedecarboxylase4e-1995.1
NC_010465:2428620:243234224323422432764423Yersinia pseudotuberculosis YPIII, complete genomeCarboxymuconolactone decarboxylase4e-1995.1
NC_008150:1543635:155667215566721557094423Yersinia pestis Antiqua, complete genomeputative decarboxylase4e-1995.1
NC_005810:2043730:205676920567692057191423Yersinia pestis biovar Microtus str. 91001, complete genomeputative decarboxylase4e-1995.1
NC_003143:2258636:227167422716742272096423Yersinia pestis CO92, complete genomeputative decarboxylase4e-1995.1
NC_009381:1258396:126134912613491261771423Yersinia pestis Pestoides F chromosome, complete genomedecarboxylase4e-1995.1
NC_009708:2392640:239636223963622396784423Yersinia pseudotuberculosis IP 31758 chromosome, complete genomecarboxymuconolactone decarboxylase family protein4e-1995.1
NC_014029:2335021:233874323387432339165423Yersinia pestis Z176003 chromosome, complete genomeputative decarboxylase4e-1995.1
NC_017154:2258228:227126422712642271686423Yersinia pestis D106004 chromosome, complete genomeputative decarboxylase4e-1995.1
NC_017265:2263347:226571322657132266135423Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative decarboxylase4e-1995.1
NC_004088:2541033:254481525448152545177363Yersinia pestis KIM, complete genomehypothetical protein6e-1994.7
NC_016002:2825017:284649028464902846894405Pseudogulbenkiania sp. NH8B, complete genomecarboxymuconolactone decarboxylase6e-1994.4
NC_013592:3397304:341295534129553413260306Dickeya dadantii Ech586, complete genomeCarboxymuconolactone decarboxylase2e-1789.4
NC_009921:5609770:562771356277135628615903Frankia sp. EAN1pec, complete genomeCarboxymuconolactone decarboxylase4e-1788.6
NC_014307:1855356:187789718778971878553657Ralstonia solanacearum CFBP2957 chromosome, complete genome5e-1788.2
NC_015759:760671:773288773288773614327Weissella koreensis KACC 15510 chromosome, complete genomecarboxymuconolactone decarboxylase7e-1787.8
NC_014666:1805806:180891418089141809678765Frankia sp. EuI1c chromosome, complete genomeCarboxymuconolactone decarboxylase8e-1787.8
NC_016612:5231065:527290452729045273230327Klebsiella oxytoca KCTC 1686 chromosome, complete genomecarboxymuconolactone decarboxylase3e-1685.9
NC_020181:1317647:132888913288891329242354Enterobacter aerogenes EA1509E, complete genome4-carboxymuconolactone decarboxylase1e-1583.6
NC_018720:2097694:210024021002402101004765Bifidobacterium asteroides PRL2011 chromosome, complete genomecarboxymuconolactone decarboxylase1e-1480.5
NC_012984:2681548:270364927036492704035387Lactobacillus plantarum JDM1, complete genome4-carboxymuconolactone decarboxylase (putative)2e-1479.7
NC_014371:1358615:604260426830789Prevotella melaninogenica ATCC 25845 chromosome chromosome II,carboxymuconolactone decarboxylase family protein9e-1477.4
NC_007492:3180480:323340432334043233742339Pseudomonas fluorescens PfO-1, complete genomeCarboxymuconolactone decarboxylase9e-1477.4
NC_013716:1756545:177445817744581774847390Citrobacter rodentium ICC168, complete genomeputative 4-carboxymuconolactone decarboxylase1e-1377
NC_016776:2549465:256396825639682564801834Bacteroides fragilis 638R, complete genomecarboxymuconolactone decarboxylase2e-1376.3
NC_003228:2473956:248917524891752490008834Bacteroides fragilis NCTC 9343, complete genomepossible carboxymuconolactone decarboxylase2e-1376.3
NC_018720:1468397:147570314757031476029327Bifidobacterium asteroides PRL2011 chromosome, complete genome4-carboxymuconolactone decarboxylase3e-1375.9
NC_014364:4488875:451632745163274516653327Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeCarboxymuconolactone decarboxylase1e-1273.9
NC_013517:2815482:282676828267682827502735Sebaldella termitidis ATCC 33386, complete genomeCarboxymuconolactone decarboxylase1e-1273.6
NC_019842:3921424:392947639294763929877402Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein9e-1270.9
NC_020410:3868573:387674038767403877141402Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeUncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit9e-1270.9
NC_009725:3878862:388620238862023886603402Bacillus amyloliquefaciens FZB42, complete genomehypothetical protein1e-1170.5
NC_010545:11950:353623536235859498Corynebacterium urealyticum DSM 7109, complete genomehomolog of 4-carboxymuconolactone decarboxylase1e-1170.1
NC_016604:3184855:3224813322481332259881176Mycobacterium rhodesiae NBB3 chromosome, complete genome4-carboxymuconolactone decarboxylase1e-1067.4
NC_020272:20435:335623356233963402Bacillus amyloliquefaciens IT-45, complete genome4-carboxymuconolactone decarboxylase2e-1066.6
NC_016628:133841:145161145161145883723Vibrio furnissii NCTC 11218 chromosome 2, complete sequence4-carboxymuconolactone decarboxylase3e-1065.9
NC_008705:1839983:1858037185803718592181182Mycobacterium sp. KMS, complete genome4-carboxymuconolactone decarboxylase4e-1065.5
NC_008705:1839983:1844622184462218458031182Mycobacterium sp. KMS, complete genome4-carboxymuconolactone decarboxylase4e-1065.5
NC_009077:1725683:1777290177729017784711182Mycobacterium sp. JLS, complete genome4-carboxymuconolactone decarboxylase4e-1065.5
NC_009338:555587:5555875555875567681182Mycobacterium gilvum PYR-GCK chromosome, complete genome4-carboxymuconolactone decarboxylase4e-1065.5
NC_017195:2498113:250834425083442509099756Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, complete4-carboxymuconolactone decarboxylase4e-1065.5
NC_010628:675445:684268684268685059792Nostoc punctiforme PCC 73102, complete genomeCarboxymuconolactone decarboxylase9e-1064.3
NC_014041:1395761:140619314061931406585393Zunongwangia profunda SM-A87 chromosome, complete genomeCarboxymuconolactone decarboxylase1e-0963.9
NC_015578:465814:486086486086486475390Treponema primitia ZAS-2 chromosome, complete genomecarboxymuconolactone decarboxylase1e-0963.5
NC_010943:1332243:134242113424211342804384Stenotrophomonas maltophilia K279a, complete genomeputative 4-carboxymuconolactone decarboxylase2e-0963.2
NC_014828:1632000:164383616438361644234399Ethanoligenens harbinense YUAN-3 chromosome, complete genomeCarboxymuconolactone decarboxylase2e-0962.8
NC_007348:2519447:252559725255972525989393Ralstonia eutropha JMP134 chromosome 2, complete sequenceCarboxymuconolactone decarboxylase5e-0961.6
NC_014623:1600360:1627936162793616291231188Stigmatella aurantiaca DW4/3-1 chromosome, complete genome3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase1e-0860.5
NC_007355:923218:929880929880930632753Methanosarcina barkeri str. fusaro chromosome 1, complete sequence4-carboxymuconolactone decarboxylase2e-0859.7
NC_013856:169974:185306185306185746441Azospirillum sp. B510 plasmid pAB510b, complete sequence4-carboxymuconolactone decarboxylase2e-0859.7
NC_015434:1313979:132102713210271321413387Verrucosispora maris AB-18-032 chromosome, complete genomecarboxymuconolactone decarboxylase2e-0859.3
NC_010628:675445:687548687548688267720Nostoc punctiforme PCC 73102, complete genomeCarboxymuconolactone decarboxylase3e-0858.9
NC_011001:63986:669026690267288387Burkholderia cenocepacia J2315 chromosome 2, complete sequence4-carboxymuconolactone decarboxylase4e-0858.9
NC_008786:3323167:332316733231673323544378Verminephrobacter eiseniae EF01-2, complete genome4-carboxymuconolactone decarboxylase7e-0857.8
NC_007511:3512100:352891835289183529307390Burkholderia sp. 383 chromosome 2, complete sequenceCarboxymuconolactone decarboxylase9e-0857.4
NC_010552:58294:612086120861594387Burkholderia ambifaria MC40-6 chromosome 2, complete sequence4-carboxymuconolactone decarboxylase9e-0857.4
NC_008061:2368517:239267823926782393067390Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence4-carboxymuconolactone decarboxylase9e-0857.4
NC_008543:2871747:287391828739182874307390Burkholderia cenocepacia HI2424 chromosome 2, complete sequence4-carboxymuconolactone decarboxylase9e-0857.4
NC_016113:994469:100092310009231001327405Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequencecarboxymuconolactone decarboxylase1e-0757.4
NC_015738:220000:240589240589241368780Eggerthella sp. YY7918, complete genomehypothetical protein1e-0757
NC_018720:2097694:212565121256512126049399Bifidobacterium asteroides PRL2011 chromosome, complete genomecarboxymuconolactone decarboxylase2e-0756.2
NC_021177:6954675:6954675695467569566211947Streptomyces fulvissimus DSM 40593, complete genome3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase3e-0755.8
NC_015556:1188500:121077412107741211151378Pseudomonas fulva 12-X chromosome, complete genome4-carboxymuconolactone decarboxylase3e-0755.8
NC_003552:484000:491290491290492042753Methanosarcina acetivorans C2A, complete genome4-carboxymuconolactone decarboxylase4e-0755.5
NC_010501:4989455:499645349964534996839387Pseudomonas putida W619, complete genomeCarboxymuconolactone decarboxylase5e-0755.1
NC_016111:5181475:5198489519848951999011413Streptomyces cattleya NRRL 8057, complete genome3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase6e-0754.7
NC_015761:1630000:1650240165024016513191080Salmonella bongori NCTC 12419, complete genomehypothetical protein6e-0754.7
NC_014840:76232:930019300193753753Pantoea sp. At-9b plasmid pPAT9B03, complete sequenceCarboxymuconolactone decarboxylase6e-0754.7
NC_015976:2187377:220876922087692209221453Sphingobium sp. SYK-6, complete genome4-carboxymuconolactone decarboxylase9e-0754.3
NC_010552:752007:768358768358769146789Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceCarboxymuconolactone decarboxylase1e-0653.5
NC_016027:54305:810328103281409378Gluconacetobacter xylinus NBRC 3288, complete genome4-carboxymuconolactone decarboxylase3e-0652.4
NC_011769:3712497:371881437188143719548735Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeCarboxymuconolactone decarboxylase4e-0652
NC_004663:1409462:1409462140946214110691608Bacteroides thetaiotaomicron VPI-5482, complete genomeconserved hypothetical protein, with a carboxymuconolactone decarboxylase domain5e-0651.6
NC_004129:1014986:103408710340871034467381Pseudomonas fluorescens Pf-5, complete genome4-carboxymuconolactone decarboxylase6e-0651.6
NC_014539:743523:781607781607781996390Burkholderia sp. CCGE1003 chromosome 1, complete sequencecarboxymuconolactone decarboxylase7e-0651.2