Pre_GI Gene

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Host: NC_011769 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011769:3712497 Desulfovibrio vulgaris str. 'Miyazaki F', complete genome

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio vulgaris str. 'Miyazaki F' has one of the best characterized nickel/iron hydrogenases. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
371249737136661170Methionine adenosyltransferaseQuickGO ontologyBLASTP
37138013714652852pantoatebeta-alanine ligaseQuickGO ontologyBLASTP
37149663715706741hypothetical protein
371586037169421083hypothetical proteinBLASTP
37170943717591498Cupin 2 conserved barrel domain proteinQuickGO ontologyBLASTP
371773737187921056hypothetical proteinBLASTP
37188143719548735Carboxymuconolactone decarboxylaseQuickGO ontologyBLASTP
37197763720675900transcriptional regulator AraC familyQuickGO ontologyBLASTP
372085237217549033-methyl-2-oxobutanoate hydroxymethyltransferaseQuickGO ontologyBLASTP
37222623723152891flagellin domain proteinQuickGO ontologyBLASTP
37233753724010636hypothetical proteinBLASTP
37243293724952624metal dependent phosphohydrolaseQuickGO ontologyBLASTP
372513837263581221protein of unknown function DUF214QuickGO ontologyBLASTP
372635837276891332protein of unknown function DUF214QuickGO ontologyBLASTP
37276863728438753ABC transporter relatedQuickGO ontologyBLASTP
372845237297441293efflux transporter RND family MFP subunitQuickGO ontologyBLASTP
373009137311371047hypothetical protein
37314693731897429heat shock protein Hsp20QuickGO ontologyBLASTP
37318973732328432heat shock protein Hsp20QuickGO ontologyBLASTP