Pre_GI: BLASTP Hits

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Query: NC_004347:103967:108703 Shewanella oneidensis MR-1, complete genome

Start: 108703, End: 109284, Length: 582

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016822:1818897:182290018229001823487588Shigella sonnei 53G, complete genomeformate dehydrogenase N subunit nitrate-inducible subunit alpha1e-71268
NC_011353:1971145:198342319834231984010588Escherichia coli O157:H7 str. EC4115 chromosome, complete genome1e-71268
NC_002695:2056545:206882320688232069410588Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-71268
NC_007384:1737885:1741118174111817441653048Shigella sonnei Ss046, complete genomeformate dehydrogenase-N, nitrate-inducible, alpha subunit2e-71268
NC_002655:2015000:2016603201660320196503048Escherichia coli O157:H7 EDL933, complete genomeformate dehydrogenase-N, nitrate-inducible, alpha subunit [Escherichia coli]2e-71267
NC_011750:1809943:1824581182458118276283048Escherichia coli IAI39 chromosome, complete genomeformate dehydrogenase-N subunit alpha, nitrate-inducible4e-71267
NC_010498:1700447:1701344170134417043913048Escherichia coli SMS-3-5, complete genomeformate dehydrogenase, nitrate inducible, alpha subunit, selenocysteine-containing4e-71267
NC_004741:1823000:1824579182457918276263048Shigella flexneri 2a str. 2457T, complete genomeformate dehydrogenase-N, nitrate-inducible, alpha subunit7e-71266
NC_008258:1784637:1786180178618017892273048Shigella flexneri 5 str. 8401, complete genomeformate dehydrogenase-N, nitrate-inducible, alpha subunit7e-71266
NC_012912:2998511:3019863301986330229103048Dickeya zeae Ech1591, complete genomeformate dehydrogenase, alpha subunit9e-70262
NC_010067:3538169:3556683355668335597333051Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete4e-68257
NC_015968:2110175:2120452212045221235053054Enterobacter asburiae LF7a chromosome, complete genomeformate dehydrogenase subunit alpha2e-66251
NC_012559:768939:771408771408771995588Laribacter hongkongensis HLHK9, complete genomeFormate dehydrogenase-O, major subunit4e-64243
NC_014118:2316000:233797523379752338565591Burkholderia sp. CCGE1002 chromosome chromosome 2, completemolybdopterin oxidoreductase Fe4S4 region1e-62238
NC_015723:1486000:1533231153323115363833153Cupriavidus necator N-1 chromosome 2, complete sequenceformate dehydrogenase subunit alpha1e-61235
NC_008027:558507:576748576748577338591Pseudomonas entomophila L48, complete genomeformate dehydrogenase-O, major subunit8e-61233
NC_010322:583842:607390607390607980591Pseudomonas putida GB-1 chromosome, complete genomemolybdopterin oxidoreductase Fe4S4 region3e-59227
NC_015499:1167932:1173693117369311766892997Thermodesulfobium narugense DSM 14796 chromosome, complete genomeformate dehydrogenase, alpha subunit2e-29129
NC_015499:1167932:118177511817751182335561Thermodesulfobium narugense DSM 14796 chromosome, complete genomemolybdopterin oxidoreductase Fe4S4 region2e-25115
NC_014314:404315:4134404134404164393000Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeformate dehydrogenase subunit alpha3e-23107
NC_017187:1424371:143446214344621435007546Arcobacter butzleri ED-1, complete genometruncated formate dehydrogenase alpha subunit7e-1477
NC_013859:421500:4342054342054368442640Azospirillum sp. B510 plasmid pAB510e, complete sequencenitrate reductase catalytic subunit4e-1374.7
NC_000916:1417981:1417981141798114205782598Methanothermobacter thermautotrophicus str. Delta H, completeformate dehydrogenase, alpha subunit homolog8e-1270.1
NC_005090:1082213:1100292110029211031112820Wolinella succinogenes DSM 1740, complete genomeFORMATE DEHYDROGENASE LARGE SUBUNIT PRECURSOR1e-1169.7
NC_003106:91339:1035641035641064852922Sulfolobus tokodaii str. 7, complete genomehypothetical formate dehydrogenase alpha subunit2e-1169.3
NC_014314:212579:2125792125792152392661Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeformate dehydrogenase subunit alpha2e-1168.9
NC_015957:8677395:8705383870538387077792397Streptomyces violaceusniger Tu 4113 chromosome, complete genomemolybdopterin oxidoreductase3e-1168.6
NC_013741:565389:5712745712745741442871Archaeoglobus profundus DSM 5631, complete genomemolybdopterin oxidoreductase9e-1166.6
NC_007907:3872805:3872805387280538744421638Desulfitobacterium hafniense Y51, complete genomeputative anaerobic dehydrogenase9e-1166.6
NC_010814:1441327:1488489148848914906782190Geobacter lovleyi SZ, complete genomemolybdopterin oxidoreductase2e-1065.5
NC_009376:832000:8434468434468469523507Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomemolybdopterin oxidoreductase2e-1065.5
NC_015216:2548057:2558485255848525611902706Methanobacterium sp. AL-21 chromosome, complete genomeformate dehydrogenase subunit alpha2e-1065.5
NC_012623:231603:2526082526082555472940Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeformate dehydrogenase subunit alpha3e-1065.1
NC_012632:1212780:1217732121773212197051974Sulfolobus islandicus M.16.27 chromosome, complete genomeformate dehydrogenase subunit alpha3e-1065.1
NC_013959:156991:1765171765171791652649Sideroxydans lithotrophicus ES-1 chromosome, complete genomemolybdopterin oxidoreductase3e-1065.1
NC_012632:2390831:2390831239083123937702940Sulfolobus islandicus M.16.27 chromosome, complete genomeformate dehydrogenase subunit alpha4e-1064.7
NC_009943:970901:9856069856069867361131Candidatus Desulfococcus oleovorans Hxd3, complete genomemolybdopterin oxidoreductase Fe4S4 region4e-1064.7
NC_013769:2405248:2405248240524824081872940Sulfolobus islandicus L.D.8.5 chromosome, complete genomeformate dehydrogenase subunit alpha4e-1064.7
NC_012726:2287880:2287880228788022908192940Sulfolobus islandicus M.16.4 chromosome, complete genomeformate dehydrogenase subunit alpha4e-1064.7
NC_012588:2297497:2297497229749723004362940Sulfolobus islandicus M.14.25 chromosome, complete genomeformate dehydrogenase subunit alpha4e-1064.7
NC_021184:3841172:3868981386898138710592079Desulfotomaculum gibsoniae DSM 7213, complete genomeanaerobic dehydrogenase, typically selenocysteine-containing5e-1064.3
NC_017276:2283933:2300214230021423031532940Sulfolobus islandicus REY15A chromosome, complete genomeformate dehydrogenase subunit alpha6e-1063.9
NC_017275:2327479:2329948232994823328872940Sulfolobus islandicus HVE10/4 chromosome, complete genomeformate dehydrogenase subunit alpha9e-1063.2
NC_006270:2657726:2657726265772626606652940Bacillus licheniformis ATCC 14580, complete genomeFormate dehydrogenase, alpha subunit YrhE1e-0962.8
NC_006322:2658587:2658587265858726615262940Bacillus licheniformis ATCC 14580, complete genomeYrhE1e-0962.8
NC_014976:759129:7895937895937925322940Bacillus subtilis BSn5 chromosome, complete genomeputative oxidoreductase3e-0962
NC_015474:1794879:1804735180473518067201986Pyrococcus sp. NA2 chromosome, complete genomeformate dehydrogenase alpha subunit related protein2e-0962
NC_018664:3073022:3076699307669930793472649Clostridium acidurici 9a chromosome, complete genomeformate dehydrogenase H3e-0961.6
NC_014323:3292082:3296449329644932992172769Herbaspirillum seropedicae SmR1 chromosome, complete genomeassimilatory nitrate reductase large subunit4e-0961.2
NC_014166:716000:7268457268457290972253Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeformate dehydrogenase subunit alpha4e-0960.8
NC_006138:3355028:3375583337558333784232841Desulfotalea psychrophila LSv54, complete genomeformate dehydrogenase, chain A5e-0960.8
NC_011830:3369282:3370593337059333726622070Desulfitobacterium hafniense DCB-2, complete genomemolybdopterin oxidoreductase8e-0960.5
NC_021171:4425050:4431869443186944339232055Bacillus sp. 1NLA3E, complete genometrimethylamine-N-oxide reductase (cytochrome c)7e-0960.5
NC_009515:1409912:1428988142898814310962109Methanobrevibacter smithii ATCC 35061, complete genomeformate dehydrogenase, alpha subunit, FdhA7e-0960.5
NC_014541:1996811:1999529199952920036294101Ferrimonas balearica DSM 9799 chromosome, complete genomeformate dehydrogenase, alpha subunit7e-0960.5
NC_013967:827150:8477008477008497422043Haloferax volcanii DS2 chromosome, complete genomeformate dehydrogenase alpha subunit7e-0960.5
NC_011773:3399531:3413158341315834160972940Bacillus cereus AH820 chromosome, complete genomemolybdopterin oxidoreductase family protein1e-0860.1
NC_018870:115982:1215521215521237502199Thermacetogenium phaeum DSM 12270 chromosome, complete genomethiosulfate reductase PhsA9e-0960.1
NC_005945:3321600:3334131333413133370702940Bacillus anthracis str. Sterne, complete genomemolybdopterin oxidoreductase family protein9e-0960.1
NC_007530:3321033:3333564333356433365032940Bacillus anthracis str. 'Ames Ancestor', complete genomemolybdopterin oxidoreductase family protein9e-0960.1
NC_003997:3320906:3333437333343733363762940Bacillus anthracis str. Ames, complete genomemolybdopterin oxidoreductase family protein9e-0960.1
NC_012581:897957:9022389022389051772940Bacillus anthracis str. CDC 684 chromosome, complete genomemolybdopterin oxidoreductase family protein9e-0960.1
NC_012659:3320933:3333464333346433364032940Bacillus anthracis str. A0248, complete genomemolybdopterin oxidoreductase family protein9e-0960.1
NC_017506:3825148:3829865382986538319762112Marinobacter adhaerens HP15 chromosome, complete genomehypothetical protein1e-0859.7
NC_009328:1651812:1664104166410416661432040Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeformate dehydrogenase1e-0859.3
NC_018870:115982:1159821159821181682187Thermacetogenium phaeum DSM 12270 chromosome, complete genomethiosulfate reductase PhsA1e-0859.3
NC_007517:2515870:2519197251919725218722676Geobacter metallireducens GS-15, complete genomeMolybdopterin oxidoreductase2e-0859.3
NC_015416:2723189:2762587276258727653402754Methanosaeta concilii GP-6 chromosome, complete genomeformate dehydrogenase subunit alpha2e-0858.5
NC_013165:647894:6487246487246516632940Slackia heliotrinireducens DSM 20476, complete genomeanaerobic dehydrogenase, typically selenocysteine-containing2e-0858.5
NC_009943:1262000:1270566127056612727192154Candidatus Desulfococcus oleovorans Hxd3, complete genomemolybdopterin oxidoreductase2e-0858.5
NC_010694:1932126:1948815194881519514812667Erwinia tasmaniensis, complete genomeNitrate reductase4e-0858.2
NC_015578:1038588:1065082106508210672802199Treponema primitia ZAS-2 chromosome, complete genomeformate dehydrogenase subunit alpha4e-0857.8
NC_018664:1729794:1741071174107117437642694Clostridium acidurici 9a chromosome, complete genomeNADP-dependent formate dehydrogenase FdhA4e-0857.8
NC_015562:755785:7764957764957785732079Methanotorris igneus Kol 5 chromosome, complete genomeformate dehydrogenase subunit alpha6e-0857.4
NC_015065:162317:2033882033882064053018Acidobacterium sp. MP5ACTX9 plasmid pACIX902, complete sequenceformate dehydrogenase, alpha subunit6e-0857.4
NC_012560:2315350:2330796233079623335012706Azotobacter vinelandii DJ, complete genomeassimilatory nitrate reductase, NasB8e-0857
NC_021150:2315362:2330808233080823335132706Azotobacter vinelandii CA6, complete genomeassimilatory nitrate reductase, NasB8e-0857
NC_019940:1727384:1744669174466917475602892Thioflavicoccus mobilis 8321 chromosome, complete genomeanaerobic dehydrogenase1e-0756.2
NC_015387:1803938:1803938180393818067692832Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeNitrate reductase2e-0755.8
NC_008340:682469:6824696824696847482280Alkalilimnicola ehrlichei MLHE-1, complete genomemolybdopterin oxidoreductase2e-0755.8
NC_009454:2801808:2807349280734928096522304Pelotomaculum thermopropionicum SI, complete genomeanaerobic dehydrogenases2e-0755.8
NC_017191:3901914:3924832392483239268352004Bacillus amyloliquefaciens XH7 chromosome, complete genomeoxidoreductase2e-0755.5
NC_007907:5185510:5226179522617952283982220Desulfitobacterium hafniense Y51, complete genomeputative anaerobic dehydrogenase2e-0755.1
NC_006322:2173500:2180124218012421831563033Bacillus licheniformis ATCC 14580, complete genomeYjgC3e-0755.1
NC_021184:592501:6087126087126107752064Desulfotomaculum gibsoniae DSM 7213, complete genomeanaerobic dehydrogenase, typically selenocysteine-containing3e-0755.1
NC_019842:3921424:3946953394695339489562004Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein4e-0754.7
NC_011296:1086223:1101038110103811031252088Thermodesulfovibrio yellowstonii DSM 11347, complete genomethiosulfate reductase4e-0754.7
NC_010505:3376322:3380193338019333831352943Methylobacterium radiotolerans JCM 2831, complete genomemolybdopterin oxidoreductase5e-0754.3
NC_014219:2284000:2298295229829523003492055Bacillus selenitireducens MLS10 chromosome, complete genomeformate dehydrogenase, alpha subunit7e-0753.9
NC_009725:3878862:3904179390417939061822004Bacillus amyloliquefaciens FZB42, complete genomeYyaE7e-0753.9
NC_006270:2172693:2179278217927821815722295Bacillus licheniformis ATCC 14580, complete genomeFormate dehydrogenase, alpha subunit6e-0753.9
NC_008146:3401743:3421292342129234251073816Mycobacterium sp. MCS, complete genomemolybdopterin oxidoreductase9e-0753.5
NC_008705:3430839:3449574344957434533893816Mycobacterium sp. KMS, complete genomemolybdopterin oxidoreductase9e-0753.5
NC_013939:1995546:2007829200782920101202292Deferribacter desulfuricans SSM1, complete genomeNADH-quinone oxidoreductase subunit G8e-0753.5
NC_013421:801542:8166088166088208314224Pectobacterium wasabiae WPP163, complete genomemolybdopterin oxidoreductase8e-0753.5
NC_017096:1147441:1153853115385311565672715Caldisericum exile AZM16c01, complete genomeputative formate dehydrogenase subunit alpha8e-0753.5
CP002207:725577:7454007454007483542955Bacillus atrophaeus 1942, complete genomeiron-sulfur binding domain-containing protein7e-0753.5
NC_014639:725577:7454007454007483542955Bacillus atrophaeus 1942 chromosome, complete genomeiron-sulfur binding domain-containing protein7e-0753.5
NC_021184:1125000:1142623114262311451272505Desulfotomaculum gibsoniae DSM 7213, complete genomeanaerobic dehydrogenase, typically selenocysteine-containing9e-0753.1
NC_009077:3376351:3395111339511133989263816Mycobacterium sp. JLS, complete genomemolybdopterin oxidoreductase9e-0753.1
NC_015703:1898159:1898159189815919002762118Runella slithyformis DSM 19594 chromosome, complete genomeNitrate reductase1e-0653.1
NC_020410:3868573:3895884389588438978872004Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative oxidoreductase1e-0653.1
NC_019791:1189908:1195724119572411983842661Caldisphaera lagunensis DSM 15908 chromosome, complete genomeformate dehydrogenase subunit alpha2e-0652.4
NC_014844:1270618:1307313130731313100032691Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeTrimethylamine-N-oxide reductase (cytochrome c)2e-0652.4
NC_008043:167108:1810831810831838572775Silicibacter sp. TM1040 mega plasmid, complete sequenceformate dehydrogenase, alpha subunit2e-0652
NC_017161:1012874:1015638101563810176562019Hydrogenobacter thermophilus TK-6 chromosome, complete genomemolybdopterin oxidoreductase2e-0652
NC_013799:1012884:1015648101564810176662019Hydrogenobacter thermophilus TK-6, complete genomeassimilatory nitrate reductase2e-0652
NC_007907:5404608:5407969540796954101432175Desulfitobacterium hafniense Y51, complete genomeputative anaerobic dehydrogenase3e-0651.6
NC_015737:53682:5368253682564832802Clostridium sp. SY8519, complete genomeanaerobic dehydrogenase4e-0651.2
NC_012438:1301960:1306776130677613099913216Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomemolybdopterin oxidoreductase4e-0651.2
NC_013959:1723037:1723037172303717259522916Sideroxydans lithotrophicus ES-1 chromosome, complete genomemolybdopterin oxidoreductase4e-0651.2
NC_015680:841783:8628868628868648021917Pyrococcus yayanosii CH1 chromosome, complete genomemolybdopterin oxidoreductase, molybdopterin-binding subunit6e-0650.8
NC_016584:85543:1047891047891068702082Desulfosporosinus orientis DSM 765 chromosome, complete genomeanaerobic dehydrogenase8e-0650.4
NC_011892:77975:9437994379973452967Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completeformate dehydrogenase, alpha subunit8e-0650.1
NC_010730:1211506:1229547122954712327683222Sulfurihydrogenibium sp. YO3AOP1, complete genomemolybdopterin oxidoreductase9e-0650.1
NC_009802:1827138:1827138182713818294292292Campylobacter concisus 13826, complete genomeputative anaerobic dehydrogenase9e-0650.1
NC_017080:2379551:2402220240222024043552136Phycisphaera mikurensis NBRC 102666, complete genomenitrate reductase9e-0650.1