Pre_GI: BLASTP Hits

Some Help

Query: NC_004129:5781413:5800841 Pseudomonas fluorescens Pf-5, complete genome

Start: 5800841, End: 5801791, Length: 951

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009997:3661083:366873136687313669651921Shewanella baltica OS195, complete genomeresponse regulator receiver modulated CheW protein1e-59230
NC_009092:1504363:155260515526051553525921Shewanella loihica PV-4, complete genomeresponse regulator receiver modulated CheW protein1e-58226
NC_009438:3019552:301955230195523020472921Shewanella putrefaciens CN-32 chromosome, complete genomeputative CheW protein1e-57223
NC_010334:1701957:172214717221471723067921Shewanella halifaxensis HAW-EB4, complete genomeresponse regulator receiver modulated CheW protein4e-55215
NC_015424:2917817:292850329285032929414912Aeromonas veronii B565 chromosome, complete genomechemotaxis protein methyltransferase CheV8e-55214
NC_014541:2978500:297933329793332980265933Ferrimonas balearica DSM 9799 chromosome, complete genomeresponse regulator receiver modulated CheW protein2e-50199
NC_013851:759500:776361776361777284924Allochromatium vinosum DSM 180 chromosome, complete genomeresponse regulator receiver modulated CheW protein3e-48192
NC_010506:2146444:217159921715992172495897Shewanella woodyi ATCC 51908, complete genomeresponse regulator receiver modulated CheW protein4e-45181
NC_017506:3248724:326630932663093267196888Marinobacter adhaerens HP15 chromosome, complete genomeresponse regulator receiver modulated CheW protein4e-45181
NC_008700:2451798:2470301247030124713171017Shewanella amazonensis SB2B, complete genomechemotaxis protein CheV1e-44180
NC_016628:763833:789981789981790904924Vibrio furnissii NCTC 11218 chromosome 2, complete sequencechemotaxis protein CheV, hypothetical1e-40167
NC_014310:607896:627457627457628401945Ralstonia solanacearum PSI07 megaplasmid, complete sequenceresponse regulator receiver, chew-like domain2e-33142
NC_010678:900389:904319904319905269951Ralstonia pickettii 12J chromosome 2, complete sequenceresponse regulator receiver modulated CheW protein3e-33142
NC_012857:41946:458764587646826951Ralstonia pickettii 12D chromosome 2, complete genomeresponse regulator receiver modulated CheW protein3e-33142
NC_012440:659646:694230694230695192963Persephonella marina EX-H1, complete genomechemotactic response regulator CheV1e-30134
NC_012559:2309566:232278823227882323723936Laribacter hongkongensis HLHK9, complete genomeCheV11e-29130
NC_012559:1301988:130903213090321309964933Laribacter hongkongensis HLHK9, complete genomeCheV11e-29130
NC_012880:2871480:289100328910032891977975Dickeya dadantii Ech703, complete genomeresponse regulator receiver modulated CheW protein4e-29129
NC_012559:2309566:232181423218142322755942Laribacter hongkongensis HLHK9, complete genomeCheV29e-28124
NC_013282:1842412:186746718674671868465999Cronobacter turicensis, complete genomehypothetical protein4e-27122
NC_015850:169180:203605203605204570966Acidithiobacillus caldus SM-1 chromosome, complete genomechemotaxis protein CheV9e-27120
NC_011126:163878:1724551724551734951041Hydrogenobaculum sp. Y04AAS1, complete genomeresponse regulator receiver modulated CheW protein1e-25117
NC_012438:1211940:123360012336001234547948Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomechemotactic response regulator CheV2e-25116
NC_014926:795549:800799800799801764966Thermovibrio ammonificans HB-1 chromosome, complete genomeresponse regulator receiver modulated CheW protein5e-25115
NC_007298:778723:805342805342806310969Dechloromonas aromatica RCB, complete genomeResponse regulator receiver:CheW-like protein5e-25115
NC_003210:721824:723750723750724658909Listeria monocytogenes EGD-e, complete genomehypothetical protein4e-25115
NC_013766:757987:761273761273762181909Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein4e-25115
NC_013768:721897:727977727977728885909Listeria monocytogenes 08-5923, complete genomehypothetical protein4e-25115
NC_002973:730942:738242738242739150909Listeria monocytogenes str. 4b F2365, complete genomechemotaxis protein CheV3e-25115
NC_003212:721112:723038723038723946909Listeria innocua Clip11262, complete genomehypothetical protein1e-24114
NC_010730:952574:960410960410961345936Sulfurihydrogenibium sp. YO3AOP1, complete genomeresponse regulator receiver modulated CheW protein1e-24114
NC_007298:778723:806328806328807263936Dechloromonas aromatica RCB, complete genomeResponse regulator receiver:CheW-like protein6e-25114
NC_019896:2579036:259537225953722596283912Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeChemotaxis protein CheV2e-23109
NC_015977:2445835:244746124474612448369909Roseburia hominis A2-183 chromosome, complete genomemodulation of CheA activity in response to attractants (chemotaxis protein)1e-22107
NC_011772:1575674:158342915834291584337909Bacillus cereus G9842, complete genomechemotaxis protein CheV5e-22105
NC_010001:3473425:347532634753263476234909Clostridium phytofermentans ISDg, complete genomeresponse regulator receiver modulated CheW protein4e-21102
NC_009633:2725128:274636627463662747319954Alkaliphilus metalliredigens QYMF chromosome, complete genomeputative CheW protein5e-1995.1
NC_012796:1049034:111469811146981115648951Desulfovibrio magneticus RS-1, complete genomechemotaxis protein CheV1e-1894.4
NC_012796:3374911:338927633892763390220945Desulfovibrio magneticus RS-1, complete genomechemotaxis protein CheV5e-1892
NC_017295:1375180:137518013751801376082903Clostridium acetobutylicum EA 2018 chromosome, complete genomeChemotaxis protein CheV1e-1687.4
NC_015687:1377367:137736713773671378269903Clostridium acetobutylicum DSM 1731 chromosome, complete genomechemotaxis protein CheV1e-1687.4
NC_003030:1375764:137576413757641376666903Clostridium acetobutylicum ATCC 824, complete genomeChemotaxis protein CheV ortholog (CheW-like adaptor domain and CheY-like reciever domain)1e-1687.4
NC_012796:1049034:116319911631991164149951Desulfovibrio magneticus RS-1, complete genomechemotaxis protein CheV6e-1582
NC_014387:1528000:154095215409521541851900Butyrivibrio proteoclasticus B316 chromosome 1, complete genomechemotaxis protein CheW4e-1479
NC_012660:5571500:559329455932945593833540Pseudomonas fluorescens SBW25 chromosome, complete genomeputative chemotaxis protein CheW4e-1272.4
NC_019978:315346:330749330749331207459Halobacteroides halobius DSM 5150, complete genomechemotaxis signal transduction protein5e-1272
NC_015172:1161000:116680611668061167300495Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeCheW protein8e-1271.2
NC_008570:1094442:111482211148221115394573Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomechemotaxis protein CheW1e-1170.9
NC_004113:1026886:1048486104848610511012616Thermosynechococcus elongatus BP-1, complete genometwo-component hybrid sensor & regulator2e-1169.7
NC_016830:2642881:267107226710722671608537Pseudomonas fluorescens F113 chromosome, complete genomeprotein CheW36e-1168.6
NC_009654:2940278:294399229439922944789798Marinomonas sp. MWYL1, complete genomeresponse regulator receiver protein1e-1067
NC_010814:3048441:309560630956063096109504Geobacter lovleyi SZ, complete genomeCheW protein2e-1067
NC_012108:3878500:389449938944993895011513Desulfobacterium autotrophicum HRM2, complete genomeCheW13e-1066.2
NC_011883:1182000:119666811966681197144477Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,CheW protein6e-1065.1
NC_020389:1346358:136211613621161362745630Methanosarcina mazei Tuc01, complete genomePositive regulator of CheA protein activity (CheW)1e-0963.9
NC_014328:1046958:105099510509951051441447Clostridium ljungdahlii ATCC 49587 chromosome, complete genomechemotaxis protein2e-0963.2
NC_013642:505518:514855514855515307453Thermotoga naphthophila RKU-10, complete genomeCheW protein3e-0962.8
NC_011978:1812000:182356518235651824017453Thermotoga neapolitana DSM 4359, complete genomePurine-binding chemotaxis protein4e-0962.4
NC_003901:1568000:158775715877571588326570Methanosarcina mazei Go1, complete genomechemotaxis protein CheW5e-0962
NC_012796:3374911:338626133862613386773513Desulfovibrio magneticus RS-1, complete genomechemotaxis protein CheW6e-0962
NC_013722:1577818:159414215941421594507366Xanthomonas albilineans, complete genomeprobable two-component system regulatory protein6e-0961.6
NC_015682:1457004:1467321146732114698972577Thermodesulfobacterium sp. OPB45 chromosome, complete genomeCheA signal transduction histidine kinase1e-0861.2
NC_008095:5062491:5086084508608450884172334Myxococcus xanthus DK 1622, complete genomegliding motility regulatory protein1e-0860.8
NC_008700:2701500:273840627384062738900495Shewanella amazonensis SB2B, complete genomepurine-binding chemotaxis protein CheW1e-0860.8
NC_012796:1049034:111815011181501118659510Desulfovibrio magneticus RS-1, complete genomechemotaxis protein CheW1e-0860.8
NC_012881:3362955:336650133665013367049549Desulfovibrio salexigens DSM 2638, complete genomeCheW protein1e-0860.5
NC_017030:6912830:692923569292356929801567Corallococcus coralloides DSM 2259 chromosome, complete genomeCheW protein2e-0860.5
NC_021182:2921000:294523129452312945677447Clostridium pasteurianum BC1, complete genomechemotaxis signal transduction protein2e-0860.1
NC_012796:1049034:111947211194721119942471Desulfovibrio magneticus RS-1, complete genomechemotaxis protein CheW2e-0860.1
NC_012796:1049034:116665011666501167162513Desulfovibrio magneticus RS-1, complete genomechemotaxis protein CheW3e-0859.7
NC_012796:1049034:105672310567231057193471Desulfovibrio magneticus RS-1, complete genomechemotaxis protein CheW3e-0859.7
NC_010801:421906:449132449132449626495Burkholderia multivorans ATCC 17616 chromosome 3, completeresponse regulator receiver protein3e-0859.7
NC_010087:460591:475232475232475726495Burkholderia multivorans ATCC 17616 chromosome 3, completeresponse regulator receiver protein3e-0859.7
NC_020126:7285452:7282870728287072854552586Myxococcus stipitatus DSM 14675, complete genomesensor histidine kinase/response regulator3e-0859.7
NC_014972:2089003:209368920936892094168480Desulfobulbus propionicus DSM 2032 chromosome, complete genomeCheW protein2e-0859.7
NC_009614:2783698:2787645278764527917124068Bacteroides vulgatus ATCC 8482 chromosome, complete genometwo-component system sensor histidine kinase/response regulator, hybrid3e-0859.3
NC_005090:1033746:103754710375471038023477Wolinella succinogenes DSM 1740, complete genomePUTATIVE CHEMOTAXIS PROTEIN CHEW4e-0858.9
NC_014831:2224733:224759422475942248124531Thermaerobacter marianensis DSM 12885 chromosome, complete genomeCheW protein4e-0858.9
NC_019892:376000:388935388935389435501Singulisphaera acidiphila DSM 18658 chromosome, complete genomechemotaxis signal transduction protein8e-0858.2
NC_009328:814530:866076866076866756681Geobacillus thermodenitrificans NG80-2 chromosome, complete genometwo-component response regulator8e-0858.2
NC_014973:1071500:107325110732511073775525Geobacter sp. M18 chromosome, complete genomeCheW protein1e-0757.8
NC_012880:1765920:179690017969001797397498Dickeya dadantii Ech703, complete genomeCheW protein1e-0757.8
NC_013223:1090397:110361011036101104107498Desulfohalobium retbaense DSM 5692, complete genomeCheW protein9e-0857.8
NC_010338:650054:673600673600673965366Caulobacter sp. K31, complete genomeresponse regulator receiver protein1e-0757.4
NC_011653:1463743:1464305146430514660681764Thermosipho africanus TCF52B, complete genomeCheA signal transduction histidine kinase, putative1e-0757.4
NC_006370:847204:851795851795852163369Photobacterium profundum SS9 chromosome 1, complete sequenceputative chemotaxis protein CheY1e-0757.4
NC_020291:3900046:391459039145903915093504Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomechemotaxis signal transduction protein2e-0757
NC_013946:879199:8932778932778960122736Meiothermus ruber DSM 1279 chromosome, complete genomeCheA signal transduction histidine kinase2e-0757
NC_015703:3637312:3647113364711336482371125Runella slithyformis DSM 19594 chromosome, complete genomeresponse regulator receiver sensor signal transduction histidine kinase2e-0757
NC_014012:207289:217185217185217547363Shewanella violacea DSS12, complete genomechemotaxis protein CheY2e-0757
NC_008577:1579950:157995015799501580444495Shewanella sp. ANA-3 chromosome 1, complete sequenceCheW protein2e-0757
NC_007498:1148249:116726311672631167736474Pelobacter carbinolicus DSM 2380, complete genomechemotaxis signal transduction protein, purine binding protein, CheW-like2e-0756.6
NC_016629:2561000:257063625706362571133498Desulfovibrio africanus str. Walvis Bay chromosome, completeCheW protein2e-0756.6
NC_010159:2955562:295773429577342958231498Yersinia pestis Angola, complete genomechemotaxis protein CheW2e-0756.6
NC_005810:1976000:199435519943551994852498Yersinia pestis biovar Microtus str. 91001, complete genomepurine-binding chemotaxis protein2e-0756.6
NC_003143:1880000:189807318980731898570498Yersinia pestis CO92, complete genomechemotaxis protein CheW2e-0756.6
NC_009381:2009842:201136920113692011866498Yersinia pestis Pestoides F chromosome, complete genomepurine-binding chemotaxis protein2e-0756.6
NC_014029:2607666:260958326095832610080498Yersinia pestis Z176003 chromosome, complete genomechemotaxis protein CheW2e-0756.6
NC_017265:1715035:173450917345091735006498Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,chemotaxis protein CheW2e-0756.6
NC_016048:3667890:369107936910793691573495Oscillibacter valericigenes Sjm18-20, complete genomechemotaxis protein CheW3e-0756.2
NC_013592:1668092:170080317008031701300498Dickeya dadantii Ech586, complete genomeCheW protein3e-0756.2
NC_008710:577696:589699589699590073375Borrelia turicatae 91E135, complete genomechemotaxis protein CheY4e-0755.8
NC_013421:2004088:201966220196622020159498Pectobacterium wasabiae WPP163, complete genomeCheW protein4e-0755.5
NC_009654:3849774:386213438621343862625492Marinomonas sp. MWYL1, complete genomeputative CheW protein5e-0755.5
NC_012917:2971702:297639229763922976889498Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeCheW protein5e-0755.5
NC_015497:2997275:301904230190423019539498Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeCheW protein6e-0755.5
NC_014500:3071764:308452430845243085021498Dickeya dadantii 3937 chromosome, complete genomePositive regulator of CheA protein activity (CheW)7e-0755.1
NC_010673:578474:592783592783593157375Borrelia hermsii DAH, complete genomechemotaxis protein CheY6e-0755.1
NC_008570:1094442:1104414110441411078423429Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeresponse regulator/sensor histidine kinase6e-0755.1
NC_009092:1599526:160052316005231601017495Shewanella loihica PV-4, complete genomeCheW protein8e-0754.7
NC_018012:1326553:132886713288671329232366Thiocystis violascens DSM 198 chromosome, complete genomeresponse regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains8e-0754.7
NC_014721:508000:5228335228335241521320Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeresponse regulator receiver sensor signal transduction histidine kinase1e-0654.7
NC_018750:5828000:5844920584492058502775358Streptomyces venezuelae ATCC 10712, complete genomeTwo-component hybrid sensor and regulator1e-0654.3
NC_011832:2760000:276328827632882763842555Candidatus Methanosphaerula palustris E1-9c, complete genomeCheW protein1e-0653.9
NC_014844:2056943:207194420719442072312369Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeresponse regulator receiver2e-0653.9
NC_007517:3151742:315356131535613153929369Geobacter metallireducens GS-15, complete genomeresponse regulator receiver domain protein (CheY-like)2e-0653.9
NC_009012:2706755:272021427202142720639426Clostridium thermocellum ATCC 27405, complete genomeCheW protein2e-0653.9
NC_016629:2784000:280454228045422805048507Desulfovibrio africanus str. Walvis Bay chromosome, completeCheW protein1e-0653.9
NC_016593:981500:100667610066761007350675Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeTwo component transcriptional regulator, winged helix1e-0653.9
NC_018868:2615822:2640289264028926437653477Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomesensor histidine kinase for anaerobic respiratory control, ArcS1e-0653.9
NC_008011:1394777:140017214001721400540369Lawsonia intracellularis PHE/MN1-00, complete genomeCheY-like receiver1e-0653.9
NC_020411:1232962:125361212536121254064453Hydrogenobaculum sp. HO, complete genomeCheW protein1e-0653.9
NC_015587:1232642:125328712532871253739453Hydrogenobaculum sp. SHO chromosome, complete genomeCheW protein1e-0653.9
NC_009512:4287605:4319674431967443220312358Pseudomonas putida F1, complete genomehistidine kinase2e-0653.5
NC_009049:1125681:113719011371901137558369Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequenceresponse regulator receiver protein2e-0653.5
NC_009428:1827352:184069518406951841063369Rhodobacter sphaeroides ATCC 17025 chromosome, complete genomeresponse regulator receiver protein2e-0653.5
NC_009921:5202607:5233400523340052346351236Frankia sp. EAN1pec, complete genomehistidine kinase2e-0653.5
NC_014012:207289:214278214278214853576Shewanella violacea DSS12, complete genomepurine-binding chemotaxis protein CheW2e-0653.1
NC_016113:1312052:1327142132714213311434002Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequenceSensor protein2e-0653.1
NC_020134:1941523:195404419540441954472429Clostridium stercorarium subsp. stercorarium DSM 8532, completeprotein CheW2e-0653.1
NC_007298:778723:793579793579793944366Dechloromonas aromatica RCB, complete genomeResponse regulator receiver3e-0652.8
NC_012721:2556160:258654425865442587065522Burkholderia glumae BGR1 chromosome 2, complete genomeChemotaxis protein CheW3e-0652.8
NC_007298:1721425:1730792173079217334132622Dechloromonas aromatica RCB, complete genomePAS5e-0652.4
NC_008570:2014151:2033782203378220350291248Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeresponse regulator protein4e-0652.4
NC_018691:2410779:2422803242280324264713669Alcanivorax dieselolei B5 chromosome, complete genomeResponse regulator receiver domain protein4e-0652.4
NC_009012:3324000:332854733285473328972426Clostridium thermocellum ATCC 27405, complete genomeCheW protein4e-0652.4
NC_014253:795869:819942819942820445504Methanohalobium evestigatum Z-7303 chromosome, complete genomeCheW protein4e-0652.4
NC_012214:1117325:111929211192921119798507Erwinia pyrifoliae Ep1/96, complete genomeChemotaxis protein5e-0652
NC_015958:2251619:2261590226159022631281539Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeCheW protein5e-0652
NC_014377:1089894:109767110976711098123453Thermosediminibacter oceani DSM 16646 chromosome, complete genomeCheW protein7e-0651.6
NC_015680:1315040:134744013474401347877438Pyrococcus yayanosii CH1 chromosome, complete genomepurine-binding chemotaxis protein (cheW)7e-0651.6
NC_015565:1647554:166513816651381665593456Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeCheW protein7e-0651.6
NC_015953:5444572:5463406546340654688535448Streptomyces sp. SirexAA-E chromosome, complete genomeGAF sensor hybrid histidine kinase6e-0651.6
NC_014328:1046958:105720410572041057605402Clostridium ljungdahlii ATCC 49587 chromosome, complete genomechemotaxis protein9e-0651.2
NC_014973:243000:257427257427258104678Geobacter sp. M18 chromosome, complete genomeresponse regulator receiver modulated PilZ sensor protein9e-0651.2