Pre_GI Gene

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Host: NC_014012 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_014012:207289 Shewanella violacea DSS12, complete genome

Host Lineage: Shewanella violacea; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella violacea DSS12 was isolated from mud, taken at a depth of 5110 m, from the Ryukyu Trench in the Philippine Sea. Shewanella violacea is psychrophilic and barophilic, with an optimum growth temperature and pressure of 8 degrees C and 30 MPa, respectively. This organism is able to grow at pressures from 0.1 MPa to 70Mpa, however, no growth occurs a temperatures above 20 degrees C.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2072892083501062polysaccharide deacetylase family proteinQuickGO ontologyBLASTP
2083922094321041chemotaxis response regulator protein-glutamate methylesterase CheBQuickGO ontologyBLASTP
209505210371867chemotaxis protein methyltransferase CheRQuickGO ontologyBLASTP
2104932140713579methyl-accepting chemotaxis proteinQuickGO ontologyBLASTP
214278214853576purine-binding chemotaxis protein CheWQuickGO ontologyBLASTP
2150362171442109chemotaxis protein CheAQuickGO ontologyBLASTP
217185217547363chemotaxis protein CheYQuickGO ontologyBLASTP
217544217858315hypothetical protein
218254218946693SCO1SenC family proteinQuickGO ontologyBLASTP
219014219928915protoheme IX farnesyltransferaseQuickGO ontologyBLASTP
219997220980984cytochrome oxidase assembly protein putativeQuickGO ontologyBLASTP
220980221525546hypothetical proteinBLASTP
221675222511837hypothetical proteinBLASTP
222572222691120hypothetical protein
222922223140219hypothetical protein
223195224070876cytochrome c oxidase subunit IIIQuickGO ontologyBLASTP
224067224636570cytochrome c oxidase assembly protein coxGQuickGO ontologyBLASTP
2246392262341596cytochrome c oxidase subunit IQuickGO ontologyBLASTP