Pre_GI: BLASTP Hits

Some Help

Query: NC_004129:3452885:3486392 Pseudomonas fluorescens Pf-5, complete genome

Start: 3486392, End: 3486808, Length: 417

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017150:255474:271941271941272363423Acetobacter pasteurianus IFO 3283-01-42C, complete genomeADP-ribose pyrophosphatase2e-35147
NC_003919:103000:121092121092121529438Xanthomonas axonopodis pv. citri str. 306, complete genomeMutT-nudix family protein3e-25113
NC_016010:65949:880398803988482444Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeADP-ribose pyrophosphatase4e-25113
NC_007103:230872:260545260545260958414Bacillus cereus E33L plasmid pE33L466, complete sequenceMutT/Nudix family protein2e-24110
NC_007508:64955:876748767488126453Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative NUDIX hydrolase family protein4e-24109
NC_014002:403180:408129408129408545417Methanohalophilus mahii DSM 5219 chromosome, complete genomeNUDIX hydrolase9e-1062.4
NC_006582:883922:898864898864899346483Bacillus clausii KSM-K16, complete genomephosphohydrolase, MutT/nudix family2e-0960.8
NC_009925:1109770:112785411278541128234381Acaryochloris marina MBIC11017, complete genomeADP-ribose pyrophosphatase (NUDIX hydroxylase)3e-0960.5
NC_019942:1270060:127229012722901272997708Aciduliprofundum sp. MAR08-339, complete genomeADP-ribose pyrophosphatase3e-0960.5
NC_013926:1037681:104213810421381042848711Aciduliprofundum boonei T469 chromosome, complete genomeNUDIX hydrolase5e-0959.7
NC_009718:1470972:148519014851901485705516Fervidobacterium nodosum Rt17-B1, complete genomeNUDIX hydrolase6e-0959.7
NC_014414:1140357:118132411813241181785462Parvularcula bermudensis HTCC2503 chromosome, complete genomeNUDIX hydrolase6e-0959.3
NC_013741:687546:692876692876693286411Archaeoglobus profundus DSM 5631, complete genomeNUDIX hydrolase7e-0959.3
NC_014830:3870000:387884038788403879244405Intrasporangium calvum DSM 43043 chromosome, complete genomeNUDIX hydrolase2e-0857.8
NC_012883:1283529:128434612843461284897552Thermococcus sibiricus MM 739, complete genomeADP-ribose pyrophosphatase2e-0857.8
NC_010725:3917369:392041639204163920943528Methylobacterium populi BJ001, complete genomeNUDIX hydrolase3e-0857.4
NC_009708:3035798:303984330398433040298456Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehydrolase NUDIX family domain-containing protein7e-0855.8
NC_014033:395000:412562412562412981420Prevotella ruminicola 23 chromosome, complete genomeADP-ribose pyrophosphatase1e-0755.1
NC_011992:773905:791433791433791879447Acidovorax ebreus TPSY, complete genomeNUDIX hydrolase2e-0754.3
NC_010465:3046904:305094930509493051404456Yersinia pseudotuberculosis YPIII, complete genomeNUDIX hydrolase4e-0753.5
NC_008149:3022970:302701530270153027470456Yersinia pestis Nepal516, complete genomeMut family protein4e-0753.5
NC_005810:1413305:141726914172691417805537Yersinia pestis biovar Microtus str. 91001, complete genomeADP-ribose pyrophosphatase4e-0753.5
NC_004088:3186954:319091831909183191454537Yersinia pestis KIM, complete genomehypothetical protein4e-0753.5
NC_007777:3824291:383269638326963833229534Frankia sp. CcI3, complete genomeNUDIX hydrolase4e-0753.5
NC_014910:966761:968914968914969339426Alicycliphilus denitrificans BC chromosome, complete genomenudix hydrolase4e-0753.5
NC_015422:910292:910292910292910717426Alicycliphilus denitrificans K601 chromosome, complete genomeNUDIX hydrolase4e-0753.5
NC_003143:1441211:145627714562771456798522Yersinia pestis CO92, complete genomeputative Mut family protein4e-0753.5
NC_006155:1567306:158237315823731582828456Yersinia pseudotuberculosis IP 32953, complete genomeputative Mut family protein4e-0753.5
NC_010634:1565788:158087015808701581325456Yersinia pseudotuberculosis PB1/+, complete genomeNUDIX hydrolase4e-0753.5
NC_017154:1454704:146972314697231470226504Yersinia pestis D106004 chromosome, complete genomeMut family protein4e-0753.5
NC_017265:2807302:281134728113472811802456Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative Mut family protein4e-0753.5
NC_017168:4363000:437834543783454378800456Yersinia pestis A1122 chromosome, complete genomeADP-ribose pyrophosphatase4e-0753.5
NC_017160:1299733:130358613035861304041456Yersinia pestis D182038 chromosome, complete genomeMut family protein4e-0753.5
NC_014029:1512605:152766315276631528118456Yersinia pestis Z176003 chromosome, complete genomeMut family protein4e-0753.5
NC_009381:2731965:273601027360102736465456Yersinia pestis Pestoides F chromosome, complete genomeMut family protein4e-0753.5
NC_010159:1558000:157239215723921572847456Yersinia pestis Angola, complete genomehydrolase, NUDIX family domain protein4e-0753.5
NC_008150:1147883:116237711623771162832456Yersinia pestis Antiqua, complete genomeputative Mut family protein4e-0753.5
NC_008782:841134:843293843293843739447Acidovorax sp. JS42, complete genomeNUDIX hydrolase5e-0753.1
NC_013929:5431954:544367154436715444177507Streptomyces scabiei 87.22 chromosome, complete genomeNUDIX hydrolase7e-0752.8
NC_015574:2355500:236358323635832363996414Methanobacterium sp. SWAN-1 chromosome, complete genomeNUDIX hydrolase8e-0752.4
NC_001263:243000:262878262878263456579Deinococcus radiodurans R1 chromosome 1, complete sequenceMutT/nudix family protein9e-0752.4
NC_012589:842270:856945856945857379435Sulfolobus islandicus L.S.2.15, complete genomeNUDIX hydrolase9e-0752.4
NC_009074:3409849:343934634393463439795450Burkholderia pseudomallei 668 chromosome I, complete sequencemutator mutT protein1e-0651.6
NC_018750:5293829:530525453052545305784531Streptomyces venezuelae ATCC 10712, complete genomeMutT-family protein1e-0651.6
NC_012797:1:258442584426323480Desulfovibrio magneticus RS-1 plasmid pDMC1, complete sequencehypothetical protein2e-0651.2
NC_010278:1235934:125708212570821257762681Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,hypothetical protein2e-0650.8
NC_016111:4207110:421322942132294213759531Streptomyces cattleya NRRL 8057, complete genomeMutT-family protein2e-0650.8
NC_007511:1681764:169351416935141693933420Burkholderia sp. 383 chromosome 2, complete sequenceNUDIX hydrolase3e-0650.8
NC_007604:1875268:187579718757971876243447Synechococcus elongatus PCC 7942, complete genomemutator MutT-like3e-0650.4
NC_006576:2423250:244080824408082441254447Synechococcus elongatus PCC 6301, complete genomemutator MutT homolog3e-0650.4
NC_000911:2777447:279443127944312794880450Synechocystis sp. PCC 6803, complete genomehypothetical protein3e-0650.4
NC_017039:2775275:279225927922592792708450Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein3e-0650.4
NC_017052:2775263:279224727922472792696450Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein3e-0650.4
NC_017277:2776264:279324827932482793697450Synechocystis sp. PCC 6803, complete genomehypothetical protein3e-0650.4
NC_003155:320979:322432322432322938507Streptomyces avermitilis MA-4680, complete genomeMutT-family protein3e-0650.4
NC_018750:2270314:229747822974782297885408Streptomyces venezuelae ATCC 10712, complete genomeMutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) or Thiamin-phosphate pyrophosphorylase protein3e-0650.4