Pre_GI: BLASTP Hits

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Query: NC_002971:1523065:1528034 Coxiella burnetii RSA 493, complete genome

Start: 1528034, End: 1529131, Length: 1098

Host Lineage: Coxiella burnetii; Coxiella; Coxiellaceae; Legionellales; Proteobacteria; Bacteria

General Information: Causes Q-fever. This organism is widely distributed in nature and can cause infections in reptiles, birds, and mammals. It causes Q fever, or 'query' fever, an atypical pneumonia first associated with abattoir workers in Australia. Transmission may be through insect vectors such as ticks that have bitten an infected wild or domesticated animal, or through an aerosol produced by domesticated animals such as sheep or cattle. The presence of a plasmid is believed to be associated with virulence and pathogenicity, however C. burnetii isolates containing plasmid QpDG are avirulent in guinea pigs and plasmidless isolates have been associated with endocarditis in humans. Coxiella burnetii has a developmental life cycle, and can grow vegetatively through binary fission, or asymmetrically and produce a spore-like cell. The spore-like cell may enable the organism to exist extracellularly for small amounts of time. This bacterium is an obligate intracellular pathogen. It is endocytosed by a host cell, a macrophage for example, and lives and replicates inside the phagolysozome, a unique property of this organism. The genome encodes proteins that have a higher than average pI, which may enable adaptation to the acidic environment of the phagolysozome. The chromosome also contains genes for a number of detoxification and stress response proteins such as dismutases that allow growth in the oxidative environment. The type IV system is similar to the one found in Legionella, which may be important for intracellular survival. This organism produces numerous ankyrin-repeat proteins that may be involved in interactions with the host cell. The genome has 83 pseudogenes, which may be a result of the typical genome-wide degradation observed with other intracellular organisms and also has a group I intron in the 23S ribosomal RNA gene.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021150:1258780:1266872126687212679961125Azotobacter vinelandii CA6, complete genomehypothetical protein1e-85316
NC_012560:1260031:1266860126686012679841125Azotobacter vinelandii DJ, complete genomehypothetical protein1e-85316
NC_015556:819503:8418078418078429011095Pseudomonas fulva 12-X chromosome, complete genomeAFG1-family ATPase4e-85315
NC_008340:362000:3783863783863795041119Alkalilimnicola ehrlichei MLHE-1, complete genomeAFG1-family ATPase5e-84311
NC_004129:5846415:5847456584745658485501095Pseudomonas fluorescens Pf-5, complete genomeATPase, putative3e-83308
NC_013716:4824541:4843760484376048448811122Citrobacter rodentium ICC168, complete genomeputative ATP/GTP-binding protein9e-77287
NC_008781:1973826:1983134198313419842371104Polaromonas naphthalenivorans CJ2, complete genomeAFG1-family ATPase1e-76286
NC_013959:1428381:1447990144799014491321143Sideroxydans lithotrophicus ES-1 chromosome, complete genomeAFG1-family ATPase9e-73274
NC_009654:4253431:4275540427554042766791140Marinomonas sp. MWYL1, complete genomeAFG1 family ATPase2e-71270
NC_015947:223184:2247532247532258531101Burkholderia sp. JV3 chromosome, complete genomeAFG1-family ATPase1e-66254
NC_007645:6461267:6463498646349864646851188Hahella chejuensis KCTC 2396, complete genomepredicted ATPase2e-66253
NC_009749:1699152:1733408173340817344751068Francisella tularensis subsp. holarctica FTA, complete genomeATPase3e-65249
NC_008369:1702885:1737141173714117382081068Francisella tularensis subsp. holarctica OSU18, complete genomeATPase3e-65249
NC_007880:1703346:1737511173751117385781068Francisella tularensis subsp. holarctica, complete genomeATPase3e-65249
NC_010336:996661:1028332102833210293991068Francisella philomiragia subsp. philomiragia ATCC 25017, completehypothetical protein3e-65249
NC_008601:1733940:1769010176901017700771068Francisella tularensis subsp. novicida U112, complete genomehypothetical protein1e-64247
NC_010677:96470:1281041281041291711068Francisella tularensis subsp. mediasiatica FSC147, complete genomeATPase2e-64246
NC_016937:24654:5627356273573401068Francisella tularensis subsp. tularensis TI0902 chromosome,ATPase3e-64246
NC_016933:24654:5627356273573401068Francisella tularensis TIGB03 chromosome, complete genomeATPase3e-64246
NC_006570:24636:5625556255573221068Francisella tularensis subsp. tularensis Schu 4, complete genomeATPase3e-64246
NC_008245:24652:5627156271573381068Francisella tularensis subsp. tularensis FSC 198, complete genomeATPase3e-64246
NC_009257:109528:1411561411561422231068Francisella tularensis subsp. tularensis WY96-3418 chromosome,AFG1 family ATPase8e-64244
NC_015696:517941:5497815497815508481068Francisella sp. TX077308 chromosome, complete genomeATPase2e-63243
NC_012982:2415237:2415237241523724163641128Hirschia baltica ATCC 49814, complete genomeAFG1-family ATPase3e-58225
NC_019907:819165:8325818325818337471167Liberibacter crescens BT-1 chromosome, complete genomeATPase4e-55215
NC_002696:3759551:3778432377843237795501119Caulobacter crescentus CB15, complete genomehypothetical protein5e-55215
NC_014774:671695:681915681915682853939Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completeAFG1-family ATPase3e-45182
NC_009656:5297000:5318858531885853198891032Pseudomonas aeruginosa PA7 chromosome, complete genomeAFG1 family ATPase4e-44179
NC_018643:857911:8817478817478827961050Alpha proteobacterium HIMB5 chromosome, complete genomeAFG1-like ATPase6e-44178
NC_016931:269537:2831702831702842221053Rickettsia massiliae str. AZT80 chromosome, complete genomeputative ATPase n2B3e-41169
NC_017043:990395:1007568100756810086201053Rickettsia montanensis str. OSU 85-930 chromosome, complete genomeATPase n2B4e-39162
NC_009881:283500:2924492924492935011053Rickettsia akari str. Hartford, complete genomeputative ATPase n2B4e-39162
NC_015866:274550:2916662916662927181053Rickettsia heilongjiangensis 054 chromosome, complete genomeATPase6e-39161
NC_017065:274165:2912032912032922551053Rickettsia slovaca str. D-CWPP chromosome, complete genomePutative ATPase n2B2e-38160
NC_012633:276500:2884572884572895091053Rickettsia africae ESF-5, complete genomePutative ATPase n2B2e-38160
NC_017044:278500:2904722904722915421071Rickettsia parkeri str. Portsmouth chromosome, complete genomePutative ATPase n2B2e-38160
NC_010263:278463:2904352904352914871053Rickettsia rickettsii str. Iowa, complete genomeATPase1e-38160
NC_009882:278384:2903562903562914081053Rickettsia rickettsii str. 'Sheila Smith', complete genomeputative ATPase n2B1e-38160
NC_016908:278457:2904272904272914791053Rickettsia rickettsii str. Colombia chromosome, complete genomeATPase1e-38160
NC_016909:278327:2903002903002913521053Rickettsia rickettsii str. Arizona chromosome, complete genomeATPase1e-38160
NC_016911:278415:2903882903882914401053Rickettsia rickettsii str. Hauke chromosome, complete genomeATPase1e-38160
NC_016913:859931:8776188776188786701053Rickettsia rickettsii str. Brazil chromosome, complete genomeATPase1e-38160
NC_016914:278500:2905212905212915731053Rickettsia rickettsii str. Hino chromosome, complete genomeATPase1e-38160
NC_016915:278000:2900732900732911251053Rickettsia rickettsii str. Hlp#2 chromosome, complete genomeATPase1e-38160
NC_016639:274157:2911952911952922471053Rickettsia slovaca 13-B chromosome, complete genomePutative ATPase n2B2e-38160
NC_017058:1152361:1156958115695811580191062Rickettsia australis str. Cutlack chromosome, complete genomeputative ATPase n2B3e-38159
NC_012988:2455807:2478314247831424794201107Methylobacterium extorquens DM4, complete genomeAFG1-family ATPase1e-37157
NC_012731:2739964:2742176274217627433511176Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative ATPase1e-37157
NC_007205:1232734:125495612549561255816861Candidatus Pelagibacter ubique HTCC1062, complete genomeAFG1-like ATPase2e-37156
NC_016929:258500:2727062727062738871182Rickettsia canadensis str. CA410 chromosome, complete genomemethionyl-tRNA formyltransferase2e-34146
NC_009879:260000:2730322730322742131182Rickettsia canadensis str. McKiel, complete genomemethionyl-tRNA formyltransferase2e-34146
NC_018080:5070687:509012050901205090968849Pseudomonas aeruginosa DK2 chromosome, complete genomeATPase1e-33144
NC_006142:243899:2595032595032605761074Rickettsia typhi str. Wilmington, complete genomeprobable ATPase7e-34144
NC_017062:244330:2599342599342610071074Rickettsia typhi str. B9991CWPP chromosome, complete genomeATPase7e-34144
NC_017066:243913:2595172595172605901074Rickettsia typhi str. TH1527 chromosome, complete genomeATPase7e-34144
NC_016845:2781438:278415327841532784665513Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative ATPase6e-1995.5
NC_014814:3364336:3381776338177633828251050Mycobacterium sp. Spyr1 chromosome, complete genomeATPase1e-1171.2
NC_009901:4216206:422068142206814221202522Shewanella pealeana ATCC 700345, complete genomeATPase-like protein7e-1065.1
NC_013715:1376985:1382774138277413840301257Rothia mucilaginosa DY-18, complete genomepredicted ATPase2e-0860.5
NC_016845:2781438:278365027836502784135486Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative ATPase3e-0756.6