Pre_GI: BLASTP Hits

Some Help

Query: NC_002950:1334500:1335588 Porphyromonas gingivalis W83, complete genome

Start: 1335588, End: 1337984, Length: 2397

Host Lineage: Porphyromonas gingivalis; Porphyromonas; Porphyromonadaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This strain (also known as HG66) is virulent in a mouse model and has been extensively studied. It was originally isolated by H. Werner in the 1950s in Bonn, Germany, from an unknown human infection. Associated with severe and chronic periodontal disease. This organism is associated with severe and chronic periodontal (tissues surrounding and supporting the tooth) diseases. Progression of the disease is caused by colonization by this organism in an anaerobic environment in host tissues and severe progression results in loss of the tissues supporting the tooth and eventually loss of the tooth itself. The black pigmentation characteristic of this bacterium comes from iron acquisition that does not use the typical siderophore system of other bacteria but accumulates hemin.Peptides appear to be the predominant carbon and energy source of this organism, perhaps in keeping with its ability to destroy host tissue. Oxygen tolerance systems play a part in establishment of the organism in the oral cavity, including a superoxide dismutase. Pathogenic factors include extracellular adhesins that mediate interactions with other bacteria as well as the extracellular matrix, and a host of degradative enzymes that are responsible for tissue degradation and spread of the organism including the gingipains, which are trypsin-like cysteine proteases.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015571:1265121:1267871126787112702672397Porphyromonas gingivalis TDC60, complete genomeanaerobic ribonucleoside triphosphate reductase01635
NC_010729:1549744:1550268155026815526642397Porphyromonas gingivalis ATCC 33277, complete genomeanaerobic ribonucleoside-triphosphate reductase01633
NC_004663:2509433:2511803251180325141962394Bacteroides thetaiotaomicron VPI-5482, complete genomeanaerobic ribonucleoside triphosphate reductase01100
NC_014633:837588:8793108793108816612352Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceribonucleoside-triphosphate reductase class III catalytic subunit0935
NC_014828:2657623:2673882267388226762272346Ethanoligenens harbinense YUAN-3 chromosome, complete genomeanaerobic ribonucleoside-triphosphate reductase1e-177624
NC_007907:456164:4561644561644585332370Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-168593
NC_016048:2055199:2055199205519920575352337Oscillibacter valericigenes Sjm18-20, complete genomeanaerobic ribonucleoside-triphosphate reductase2e-168593
NC_013316:120759:1398251398251421762352Clostridium difficile R20291, complete genomeanaerobic ribonucleoside-triphosphate reductase4e-164578
NC_009089:117980:1380201380201403712352Clostridium difficile 630, complete genomeanaerobic ribonucleoside-triphosphate reductase1e-163577
NC_014614:1090000:1093648109364810959962349Clostridium sticklandii, complete genomeanaerobic ribonucleoside triphosphate reductase2e-162573
NC_014829:4511738:4518366451836645201921827Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeanaerobic ribonucleoside-triphosphate reductase2e-159563
NC_014628:501755:5082215082215100831863Paenibacillus polymyxa SC2 plasmid pSC2, complete sequenceAnaerobic ribonucleoside-triphosphate reductase, putative3e-155549
NC_005945:3359598:3371119337111933729751857Bacillus anthracis str. Sterne, complete genomeanaerobic ribonucleoside triphosphate reductase6e-155548
NC_006270:3627974:3649808364980836516761869Bacillus licheniformis ATCC 14580, complete genomeanaerobic ribonucleoside triphosphate reductase7e-149528
NC_006322:3628143:3649977364997736518451869Bacillus licheniformis ATCC 14580, complete genomeanaerobic ribonucleoside triphosphate reductase7e-149528
NC_012673:77610:8689186891887411851Exiguobacterium sp. AT1b, complete genomeanaerobic ribonucleoside-triphosphate reductase4e-146519
NC_021171:608315:6266766266766285231848Bacillus sp. 1NLA3E, complete genomeanaerobic ribonucleoside triphosphate reductase7e-144511
NC_016023:1923170:1926158192615819280291872Bacillus coagulans 36D1 chromosome, complete genomeanaerobic ribonucleoside-triphosphate reductase2e-119430
NC_014220:837926:8447798447798467942016Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeanaerobic ribonucleoside-triphosphate reductase6e-112405
NC_020291:79502:8634486344884582115Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeanaerobic ribonucleoside-triphosphate reductase NrdD2e-102374
NC_014328:180482:1804821804821825872106Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeanaerobic ribonucleoside-triphosphate reductase9e-99362
NC_015425:198315:1983151983152004172103Clostridium botulinum BKT015925 chromosome, complete genomeanaerobic ribonucleoside-triphosphate reductase1e-95351
NC_009617:68779:8726087260893682109Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeanaerobic ribonucleoside triphosphate reductase1e-88328
NC_020063:4170464:4190379419037941925172139Enterobacteriaceae bacterium strain FGI 57, complete genomeribonucleoside-triphosphate reductase class III catalytic subunit8e-73275
NC_016818:546805:5687015687015708842184Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeanaerobic ribonucleoside-triphosphate reductase2e-69264
NC_012913:56258:6056860568626942127Aggregatibacter aphrophilus NJ8700, complete genomeanaerobic ribonucleoside-triphosphate reductase1e-67258
NC_013895:605488:6206306206306228402211Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completeanaerobic ribonucleoside-triphosphate reductase2e-63244
NC_017214:191791:2199792199792224532475Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeAnaerobic ribonucleoside-triphosphate reductase5e-60233
NC_017215:1499179:1527367152736715298412475Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,Ribonucleoside-triphosphate reductase5e-60233
NC_012815:1494263:1522451152245115248772427Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeanaerobic ribonucleoside triphosphate reductase3e-60233
NC_011835:625472:6536626536626560882427Bifidobacterium animalis subsp. lactis AD011 chromosome, completeanaerobic ribonucleoside triphosphate reductase3e-60233
NC_017216:1494190:1522378152237815248042427Bifidobacterium animalis subsp. lactis BLC1, complete genomeanaerobic ribonucleoside triphosphate reductase3e-60233
NC_017217:1499832:1528020152802015304462427Bifidobacterium animalis subsp. lactis V9 chromosome, completeanaerobic ribonucleoside triphosphate reductase3e-60233
NC_015514:3911655:3917352391735239196102259Cellulomonas fimi ATCC 484 chromosome, complete genomeanaerobic ribonucleoside-triphosphate reductase9e-60232
NC_018720:357716:3844563844563868672412Bifidobacterium asteroides PRL2011 chromosome, complete genomeanaerobic ribonucleoside triphosphate reductase8e-59229
NC_013410:89811:9301993019946471629Fibrobacter succinogenes subsp. succinogenes S85 chromosome,anaerobic ribonucleoside-triphosphate reductase2e-54214
NC_020164:280087:2987222987223005661845Staphylococcus warneri SG1, complete genomeanaerobic ribonucleoside triphosphate reductase1e-53211
NC_009513:1363987:1363987136398713662212235Lactobacillus reuteri F275, complete genomeanaerobic ribonucleoside triphosphate reductase3e-53210
NC_015697:321311:3228583228583250922235Lactobacillus reuteri SD2112 chromosome, complete genomeanaerobic ribonucleoside-triphosphate reductase large subunit1e-52208
NC_015389:809474:8094748094748117112238Coriobacterium glomerans PW2 chromosome, complete genomeanaerobic ribonucleoside-triphosphate reductase3e-52207
NC_015737:1441086:1442779144277914449682190Clostridium sp. SY8519, complete genomeoxygen-sensitive ribonucleoside-triphosphate reductase1e-49198
NC_017353:361350:3913343913343931811848Staphylococcus lugdunensis N920143, complete genomeanaerobic ribonucleoside-triphosphate reductase2e-44181
NC_015636:927815:9278159278159301212307Methanothermococcus okinawensis IH1 chromosome, complete genomeanaerobic ribonucleoside-triphosphate reductase4e-42173
NC_015562:899030:9280279280279303152289Methanotorris igneus Kol 5 chromosome, complete genomeanaerobic ribonucleoside-triphosphate reductase4e-37157
NC_015574:114426:1214861214861238222337Methanobacterium sp. SWAN-1 chromosome, complete genomeanaerobic ribonucleoside-triphosphate reductase5e-34146
NC_020409:1407857:1427702142770214297652064Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeAnaerobic ribonucleoside-triphosphate reductase2e-28128
NC_009635:1067334:1071030107103010747073678Methanococcus aeolicus Nankai-3 chromosome, complete genomeanaerobic ribonucleoside-triphosphate reductase2e-28128
NC_016048:987699:9924009924009945772178Oscillibacter valericigenes Sjm18-20, complete genomeanaerobic ribonucleoside-triphosphate reductase3e-28127
NC_013170:277321:2992712992713014932223Cryptobacterium curtum DSM 15641, complete genomeanaerobic ribonucleoside-triphosphate reductase3e-28127
NC_015320:273979:2791762791762812782103Archaeoglobus veneficus SNP6 chromosome, complete genomeanaerobic ribonucleoside-triphosphate reductase3e-27124
NC_014389:353000:3536853536853559402256Butyrivibrio proteoclasticus B316 plasmid pCY360, completeanaerobic ribonucleoside triphosphate reductase NrdD36e-27123
NC_015681:102000:1227331227331248052073Thermodesulfatator indicus DSM 15286 chromosome, complete genomeanaerobic ribonucleoside-triphosphate reductase2e-26121
NC_014377:1985714:2004231200423120063212091Thermosediminibacter oceani DSM 16646 chromosome, complete genomeanaerobic ribonucleoside-triphosphate reductase6e-22106
NC_015942:3185193:3204638320463832066652028Acidithiobacillus ferrivorans SS3 chromosome, complete genomeanaerobic ribonucleoside-triphosphate reductase9e-1996.3
NC_013851:2610847:2612385261238526144362052Allochromatium vinosum DSM 180 chromosome, complete genomeanaerobic ribonucleoside-triphosphate reductase2e-1894.7
NC_019902:1681320:1681320168132016833922073Thioalkalivibrio nitratireducens DSM 14787, complete genomeRibonucleotide reductase of class III (anaerobic), large subunit6e-1893.6
NC_014484:762710:7668567668567689252070Spirochaeta thermophila DSM 6192 chromosome, complete genomeanaerobic ribonucleoside triphosphate reductase1e-1792.8
NC_018866:1706000:1723045172304517251682124Dehalobacter sp. DCA chromosome, complete genomeRibonucleotide reductase of class III (anaerobic), large subunit2e-1688.6
NC_015499:1097432:1098124109812411004002277Thermodesulfobium narugense DSM 14796 chromosome, complete genomeanaerobic ribonucleoside-triphosphate reductase3e-1687.8
NC_016801:394400:4114414114414132251785Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeanaerobic ribonucleoside triphosphate reductase2e-1275.1
NC_009033:1042500:1042552104255210444531902Staphylothermus marinus F1, complete genomeanaerobic ribonucleoside-triphosphate reductase2e-0965.1
NC_017954:345430:3481523481523500621911Thermogladius cellulolyticus 1633 chromosome, complete genomeanaerobic ribonucleoside triphosphate reductase2e-0964.7
NC_014205:1331594:1347586134758613494811896Staphylothermus hellenicus DSM 12710 chromosome, complete genomeanaerobic ribonucleoside-triphosphate reductase5e-0963.9
NC_013959:2666321:2673102267310226759422841Sideroxydans lithotrophicus ES-1 chromosome, complete genomeribonucleoside-diphosphate reductase, alpha subunit7e-0963.5
NC_014160:869873:8742248742248761011878Thermosphaera aggregans DSM 11486 chromosome, complete genomeanaerobic ribonucleoside-triphosphate reductase8e-0963.2
NC_011770:4591500:4594660459466045975512892Pseudomonas aeruginosa LESB58, complete genomeNrdA, catalytic component of class Ia ribonucleotide reductase7e-0963.2
NC_002516:1236644:1251418125141812543092892Pseudomonas aeruginosa PAO1, complete genomeribonucleotide-diphosphate reductase alpha subunit7e-0963.2
NC_008463:4389721:4394703439470343975942892Pseudomonas aeruginosa UCBPP-PA14, complete genomeribonucleoside reductase, large chain7e-0963.2
NC_018080:4280401:4285383428538342882742892Pseudomonas aeruginosa DK2 chromosome, complete genomeribonucleotide-diphosphate reductase subunit alpha7e-0963.2
NC_015726:3280000:3300802330080233037352934Cupriavidus necator N-1 chromosome 1, complete sequenceribonucleoside-diphosphate reductase subunit alpha1e-0862.8
NC_007347:3204637:3223794322379432267332940Ralstonia eutropha JMP134 chromosome 1, complete sequenceribonucleotide-diphosphate reductase alpha subunit1e-0862.8
NC_017506:3825148:3842051384205138448162766Marinobacter adhaerens HP15 chromosome, complete genomeribonucleotide-diphosphate reductase subunit alpha4e-0860.8
NC_005773:4282840:4285909428590942888212913Pseudomonas syringae pv. phaseolicola 1448A, complete genomeribonucleoside-diphosphate reductase, alpha subunit9e-0859.7
NC_009434:1743696:1754335175433517572202886Pseudomonas stutzeri A1501, complete genomeribonucleotide-diphosphate reductase subunit alpha1e-0759.3
NC_015740:1594376:1606131160613116090132883Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeribonucleotide-diphosphate reductase subunit alpha1e-0759.3
NC_000868:1562000:1570457157045715768256369Pyrococcus abyssi GE5, complete genomeribonucleotide-diphosphate reductase alpha subunit1e-0758.9
NC_006347:3082921:3096589309658930991082520Bacteroides fragilis YCH46, complete genomeribonucleotide-diphosphate reductase alpha subunit2e-0758.5
NC_003228:3143470:3157880315788031603992520Bacteroides fragilis NCTC 9343, complete genomeribonucleotide-diphosphate reductase alpha subunit2e-0758.5
NC_016776:3181706:3195374319537431978932520Bacteroides fragilis 638R, complete genomeputative ribonucleoside-diphosphate reductase alpha chain2e-0758.5
NC_018644:446102:4549164549164576542739Alpha proteobacterium HIMB59 chromosome, complete genomeribonucleoside-diphosphate reductase, alpha subunit3e-0758.2
NC_014532:722151:7380617380617397941734Halomonas elongata DSM 2581, complete genomeanaerobic ribonucleoside triphosphate reductase2e-0758.2
NC_015410:3791500:3795351379535137982572907Pseudomonas mendocina NK-01 chromosome, complete genomeribonucleotide-diphosphate reductase subunit alpha2e-0758.2
NC_011901:2739984:2755661275566127585762916Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeribonucleotide-diphosphate reductase subunit alpha3e-0757.8
NC_009439:3485000:3489275348927534921812907Pseudomonas mendocina ymp, complete genomeribonucleotide-diphosphate reductase subunit alpha4e-0757.8
NC_007404:2048000:2066037206603720689612925Thiobacillus denitrificans ATCC 25259, complete genomeribonucleotide-diphosphate reductase alpha subunit6e-0757
NC_015556:1899850:1910179191017919130882910Pseudomonas fulva 12-X chromosome, complete genomeribonucleoside-diphosphate reductase, alpha subunit7e-0756.6
NC_019940:1309359:1311579131157913145062928Thioflavicoccus mobilis 8321 chromosome, complete genomeribonucleoside-diphosphate reductase subunit alpha9e-0756.2
NC_014804:1898419:1917408191740819205363129Thermococcus barophilus MP chromosome, complete genomeribonucleotide reductase of class II, coenzyme B12-dependent8e-0756.2
NC_002689:78297:9374993749960522304Thermoplasma volcanium GSS1, complete genomeribonucleotide-diphosphate reductase alpha subunit2e-0655.1
NC_016002:1975000:2018411201841120212602850Pseudogulbenkiania sp. NH8B, complete genomeribonucleoside-diphosphate reductase subunit alpha4e-0653.9
NC_019902:2372097:2389946238994623928582913Thioalkalivibrio nitratireducens DSM 14787, complete genomeRibonucleotide reductase of class Ia (aerobic), alpha subunit5e-0653.9