Pre_GI Gene

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Host: NC_011835 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011835:625472 Bifidobacterium animalis subsp. lactis AD011 chromosome, complete

Host Lineage: Bifidobacterium animalis; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Isolated from the fecal sample of a healthy, breast-fed infant. Normal gut bacterium. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
6254726275292058ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
6275476295201974ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
629517630068552MarR-type transcriptional regulatorQuickGO ontologyBLASTP
63018663028499hypothetical proteinBLASTP
630326630892567NADPH-dependent reductaseQuickGO ontologyBLASTP
631006631518513XorII very-short-patch-repair endonucleaseQuickGO ontologyBLASTP
632522632737216hypothetical proteinBLASTP
632747632878132hypothetical protein
633064633372309hypothetical proteinBLASTP
634268634435168hypothetical protein
6344816375043024CRISPR-associated HD domain-containing proteinQuickGO ontologyBLASTP
6391836403761194hypothetical proteinBLASTP
6410986427051608CRISPR-associated protein Cas1QuickGO ontologyBLASTP
6443426456131272glutamate--cysteine ligaseQuickGO ontologyBLASTP
6456876503544668activator of 2-hydroxyglutaryl-CoA dehydrataseQuickGO ontologyBLASTP
650640651224585hypothetical proteinBLASTP
651221651622402transmembrane proteinQuickGO ontologyBLASTP
651774652574801M-like protein Szp3QuickGO ontologyBLASTP
652571653320750anaerobic ribonucleoside-triphosphate reductase activating proteinQuickGO ontologyBLASTP
6536626560882427anaerobic ribonucleoside triphosphate reductaseQuickGO ontologyBLASTP