Pre_GI: BLASTP Hits

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Query: NC_002944:2373873:2373873 Mycobacterium avium subsp. paratuberculosis K-10, complete genome

Start: 2373873, End: 2375330, Length: 1458

Host Lineage: Mycobacterium avium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a diary herd in Wisconsin, USA in the 1970's. Environmental organism which causes infections in birds and humans. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, Mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium avium is ubiquitous in the environment, and can be found in stagnant waters and soils. This organism causes tuberculosis in birds and disseminated infections in immunocompromized humans (the elderly, children, and especially patients with AIDS). Infection results in a characteristic pulmonary disease which requires expensive drug therapy for successful treatment. Most prevalent colony morphotypes are smooth opaque, smooth transparent and rough, with the last two being the faster growers in vivo.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021177:7462000:746200474620047462990987Streptomyces fulvissimus DSM 40593, complete genomePutative aminoacid decarboxylase3e-107389
NC_007775:1002934:1015046101504610165811536Synechococcus sp. JA-3-3Ab, complete genomeOrn/Lys/Arg decarboxylase2e-87323
NC_014483:3235968:3235968323596832374431476Paenibacillus polymyxa E681 chromosome, complete genomeArginine decarboxylase3e-87322
NC_014622:3525017:3526491352649135279661476Paenibacillus polymyxa SC2 chromosome, complete genomeorn/lys/arg decarboxylase major region4e-87322
NC_013406:2207520:2227312222731222287991488Paenibacillus sp. Y412MC10 chromosome, complete genomeOrn/Lys/Arg decarboxylase major region9e-87321
NC_009495:3309550:3313006331300633144661461Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeOrn/Lys/Arg decarboxylase2e-83310
NC_009698:3185359:3186102318610231875621461Clostridium botulinum A str. Hall chromosome, complete genomeOrn/Lys/Arg decarboxylase2e-83310
NC_010516:3368951:3373629337362933750891461Clostridium botulinum B1 str. Okra, complete genomeOrn/Lys/Arg decarboxylase1e-83310
NC_012658:3387774:3391191339119133926511461Clostridium botulinum Ba4 str. 657 chromosome, complete genomeOrn/Lys/Arg decarboxylase3e-82305
NC_014652:757381:7680177680177694981482Caldicellulosiruptor hydrothermalis 108 chromosome, completeorn/lys/arg decarboxylase major region4e-82305
NC_014392:1935130:1957506195750619590381533Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeOrn/Lys/Arg decarboxylase major region2e-81303
NC_016012:879972:8977828977828992391458Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeOrn/Lys/Arg decarboxylase major region4e-80299
NC_003869:74836:9599295992974221431Thermoanaerobacter tengcongensis MB4, complete genomeArginine/lysine/ornithine decarboxylase6e-75281
NC_010321:2207364:2212107221210722135281422Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeOrn/Lys/Arg decarboxylase, major region2e-74280
NC_014964:2199252:2199252219925222006731422Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeOrn/Lys/Arg decarboxylase major region2e-74280
NC_006177:3457637:3477988347798834793971410Symbiobacterium thermophilum IAM 14863, complete genomearginine/lysine/ornithine decarboxylase2e-69263
NC_015555:49842:8697586975883961422Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeArginine decarboxylase1e-67257
NC_010163:1361217:1374513137451313759881476Acholeplasma laidlawii PG-8A chromosome, complete genomelysine decarboxylase5e-65249
NC_010424:14657:4182241822433091488Candidatus Desulforudis audaxviator MP104C, complete genomeOrn/Lys/Arg decarboxylase, major region1e-63244
NC_019970:35985:7365373653750741422Thermoanaerobacterium thermosaccharolyticum M0795, complete genomearginine/lysine/ornithine decarboxylase1e-63244
NC_014410:51711:8720187201886221422Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,Orn/Lys/Arg decarboxylase major region2e-63243
NC_015635:811500:8287988287988302191422Microlunatus phosphovorus NM-1, complete genomeputative arginine decarboxylase3e-63243
NC_016584:85543:1185231185231199741452Desulfosporosinus orientis DSM 765 chromosome, complete genomearginine/lysine/ornithine decarboxylase3e-60233
NC_020134:1328302:1346064134606413475241461Clostridium stercorarium subsp. stercorarium DSM 8532, completearginine decarboxylase SpeA5e-59229
NC_020134:1941523:1960996196099619624381443Clostridium stercorarium subsp. stercorarium DSM 8532, completearginine decarboxylase SpeA5e-59229
NC_009633:74500:99846998461012761431Alkaliphilus metalliredigens QYMF chromosome, complete genomeOrn/Lys/Arg decarboxylase, major region3e-56219
NC_014376:386650:4070124070124084841473Clostridium saccharolyticum WM1 chromosome, complete genomeOrn/Lys/Arg decarboxylase major region9e-56218
NC_008346:36176:5056250562520641503Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeOrn/Lys/Arg decarboxylase, major region6e-55215
NC_014376:6296:2508925089265641476Clostridium saccharolyticum WM1 chromosome, complete genomeOrn/Lys/Arg decarboxylase major region3e-53209
NC_019903:134169:1479881479881494391452Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,arginine/lysine/ornithine decarboxylase3e-52206
NC_013316:4018451:4023484402348440248931410Clostridium difficile R20291, complete genomeputative arginine decarboxylase5e-48192
NC_009922:411434:4352154352154366691455Alkaliphilus oremlandii OhILAs, complete genomeOrn/Lys/Arg decarboxylase major region8e-48191
NC_012778:2997:2242522425238281404Eubacterium eligens ATCC 27750, complete genomelysine decarboxylase2e-47190
NC_015275:1:1725917259186591401Clostridium lentocellum DSM 5427 chromosome, complete genomeArginine decarboxylase2e-47190
NC_009089:4140764:4145070414507041464791410Clostridium difficile 630, complete genomeputative arginine decarboxylase1e-46187
NC_015687:303810:3528633528633543081446Clostridium acetobutylicum DSM 1731 chromosome, complete genomelysine decarboxylase3e-46186
NC_003030:303812:3528673528673543121446Clostridium acetobutylicum ATCC 824, complete genomeLysine decarboxylase3e-46186
NC_011837:3776541:3776541377654137779801440Clostridium kluyveri NBRC 12016, complete genomehypothetical protein5e-46185
NC_009706:3845039:3845039384503938464781440Clostridium kluyveri DSM 555 chromosome, complete genomeprotein SpeA25e-46185
NC_011567:1:3468934689361131425Anoxybacillus flavithermus WK1, complete genomeArginine/lysine/ornithine decarboxylase8e-45181
NC_017208:1:3438634386358071422Bacillus thuringiensis serovar chinensis CT-43 chromosome, completearginine decarboxylase1e-43177
NC_014171:1:3483334833362541422Bacillus thuringiensis BMB171 chromosome, complete genomearginine decarboxylase4e-43176
NC_014976:2231984:2253476225347622549181443Bacillus subtilis BSn5 chromosome, complete genomeputative lysine decarboxylase3e-43176
NC_014387:79808:98717987171002251509Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeOrn/Lys/Arg decarboxylase5e-41169
NC_004193:35698:3746537465388831419Oceanobacillus iheyensis HTE831, complete genomelysine decarboxylase5e-41169
NC_020291:1810527:1810527181052718119571431Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomearginine/lysine/ornithine decarboxylase4e-40166
NC_010723:2873886:2892952289295228943761425Clostridium botulinum E3 str. Alaska E43, complete genomearginine/lysine decarboxylase1e-38161
NC_014328:85290:1403051403051417531449Clostridium ljungdahlii ATCC 49587 chromosome, complete genomearginine decarboxylase1e-38161
NC_003366:2788268:2799143279914328005731431Clostridium perfringens str. 13, complete genomeprobable lysine decarboxylase3e-38159
NC_002973:2701983:2722235272223527236141380Listeria monocytogenes str. 4b F2365, complete genomeOrn/Lys/Arg decarboxylase4e-38159
NC_012488:2719955:2740207274020727415861380Listeria monocytogenes Clip81459, complete genomelysine decarboxylase1e-37158
NC_003210:2749538:2770060277006027714391380Listeria monocytogenes EGD-e, complete genomehypothetical protein2e-37157
NC_010674:3049500:3069278306927830706931416Clostridium botulinum B str. Eklund 17B, complete genomearginine/lysine decarboxylase4e-37156
NC_013891:2643085:2664601266460126659801380Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomeOrn/Lys/Arg decarboxylase4e-35149
NC_008262:2649289:2663598266359826649951398Clostridium perfringens SM101, complete genomeOrn/Lys/Arg decarboxylase3e-34146
NC_008261:3014373:3021783302178330231801398Clostridium perfringens ATCC 13124, complete genomeOrn/Lys/Arg decarboxylase5e-34145
NC_017167:129988:1592031592031606031401Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1Orn/Lys/Arg decarboxylase major region6e-32139
NC_014219:25845:4379243792452581467Bacillus selenitireducens MLS10 chromosome, complete genomeOrn/Lys/Arg decarboxylase major region2e-30134
NC_016884:157894:1751391751391765061368Sulfobacillus acidophilus DSM 10332 chromosome, complete genomearginine decarboxylase8e-28125
NC_005070:904751:9047519047519061571407Synechococcus sp. WH 8102, complete genomeOrn/Lys/Arg decarboxylase family 12e-26120
NC_012673:1650139:1655223165522316566411419Exiguobacterium sp. AT1b, complete genomeOrn/Lys/Arg decarboxylase major region4e-26119
NC_016048:1930089:1944576194457619459251350Oscillibacter valericigenes Sjm18-20, complete genomeputative pyridoxal phosphate-dependent transferase2e-22107
NC_010556:26567:4078740787421961410Exiguobacterium sibiricum 255-15, complete genomeArginine decarboxylase8e-22105
NC_007513:1311957:1340010134001013414251416Synechococcus sp. CC9902, complete genomeArginine decarboxylase2e-21103
NC_012121:113912:1267951267951281441350Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative Orn/Lys/Arg decarboxylase2e-21103
NC_009051:1242351:1251338125133812536412304Methanoculleus marisnigri JR1, complete genomeLysine decarboxylase6e-1685.9
NC_004431:4270305:4285772428577242881412370Escherichia coli CFT073, complete genomehypothetical protein1e-1585.1
NC_008563:4739333:4759622475962247619912370Escherichia coli APEC O1, complete genomehypothetical protein1e-1585.1
NC_011742:4655373:4674284467428446766532370Escherichia coli S88 chromosome, complete genomeOrn/Lys/Arg decarboxylase1e-1585.1
NC_015733:2194676:2204114220411422061622049Pseudomonas putida S16 chromosome, complete genomeornithine decarboxylase, constitutive3e-1480.5
NC_016614:1543333:1560108156010815624022295Vibrio sp. EJY3 chromosome 2, complete sequenceresponse regulator receiver domain-containing protein5e-1479.7
CP002797:4411763:4432684443268444348312148Escherichia coli NA114, complete genomeLysine decarboxylase1e-1378.6
NC_004459:2025436:2052055205205520541632109Vibrio vulnificus CMCP6 chromosome I, complete sequenceLysine decarboxylase1e-1378.6
NC_010468:4252940:4275850427585042779972148Escherichia coli ATCC 8739, complete genomeLysine decarboxylase9e-1478.6
NC_013361:5319497:5322767532276753249142148Escherichia coli O26:H11 str. 11368 chromosome, complete genomelysine decarboxylase 19e-1478.6
NC_016631:2112175:2164634216463421670782445Granulicella mallensis MP5ACTX8 chromosome, complete genomelysine decarboxylase9e-1478.6
NC_013592:956829:9792839792839814362154Dickeya dadantii Ech586, complete genomeOrnithine decarboxylase3e-1377
NC_016816:3952000:3962945396294539643301386Pantoea ananatis LMG 5342, complete genomeArginine/lysine/ornithine decarboxylase8e-1375.5
NC_012880:3529017:3529017352901735311702154Dickeya dadantii Ech703, complete genomeOrnithine decarboxylase1e-1275.1
NC_014500:1066911:1089233108923310913862154Dickeya dadantii 3937 chromosome, complete genomeornithine decarboxylase, constitutive2e-1274.3
NC_020063:2785652:2793233279323327953772145Enterobacteriaceae bacterium strain FGI 57, complete genomearginine/lysine/ornithine decarboxylase3e-1273.6
NC_008253:334467:3463563463563484822127Escherichia coli 536, complete genomelysine decarboxylase5e-1272.8
NC_010067:3247169:3265385326538532676552271Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-1170.1
NC_013421:3752619:3752619375261937547722154Pectobacterium wasabiae WPP163, complete genomeOrnithine decarboxylase1e-1068.2
NC_004547:1062410:1076168107616810783212154Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeornithine decarboxylase, constitutive3e-1067
NC_016614:1543333:1557721155772115600152295Vibrio sp. EJY3 chromosome 2, complete sequencearginine decarboxylase3e-1067
NC_011004:2507566:2525654252565425280112358Rhodopseudomonas palustris TIE-1, complete genomeOrnithine decarboxylase1e-0965.1
NC_020453:3103549:3122535312253531248922358Agromonas oligotrophica S58 DNA, complete genomeornithine decarboxylase1e-0861.6
NC_012779:305969:3154533154533177232271Edwardsiella ictaluri 93-146, complete genomeOrn/Lys/Arg decarboxylase family, putative2e-0860.8
NC_014311:1106871:1110772111077211130512280Ralstonia solanacearum PSI07 chromosome, complete genomelysine decarboxylase (LDC)3e-0860.5
NC_012559:978419:99867899867810009332256Laribacter hongkongensis HLHK9, complete genomeAdi4e-0860.1
NC_008752:3595516:3600450360045036028312382Acidovorax avenae subsp. citrulli AAC00-1, complete genomeLysine decarboxylase1e-0758.5
NC_008786:3845988:3869870386987038721882319Verminephrobacter eiseniae EF01-2, complete genomeLysine decarboxylase2e-0758.2
NC_010995:4338860:4357272435727243595242253Cellvibrio japonicus Ueda107, complete genomeprobable orn/arg/lys decarboxylase3e-0757.4
NC_011989:2795811:2795811279581127981682358Agrobacterium vitis S4 chromosome 1, complete sequenceornithine decarboxylase3e-0757.4