Pre_GI: BLASTP Hits

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Query: NC_000962:2791019:2791019 Mycobacterium tuberculosis H37Rv, complete genome

Start: 2791019, End: 2792494, Length: 1476

Host Lineage: Mycobacterium tuberculosis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain has been derived from the original human-lung H37 isolate in 1934, and has been used extensively worldwide in biomedical research. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. This bacterium is the causative agent of tuberculosis - a chronic infectious disease with a growing incidence worldwide. It infects 1.7 billion people a year (~33% of the entire world population) and causes over 3 million deaths/year. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. This bacterium does not form a polysaccharide capsule, and is an extremely slow growing obligate aerobe. The sluggish growth rate is a result of the tough cell wall that resists the passage of nutrients into the cell and inhibits waste products to be excreted out of the cell. The specialized cell envelope of this organism resembles a modified Gram positive cell wall. It also contains complex fatty acids, such as mycolic acids, that cause the waxy appearance and impermeability of the envelope. These acids are found bound to the cell envelope, but also form cord factors when linked with a carbohydrate component to form a cord-like structure. Primary infection occurs by inhalation of the organism in droplets that are aerosolized by an infected person. The organism initially replicates in cells of the terminal airways, after which it is taken up by, and replicates in, alveolar macrophages. Macrophages distribute the organism to other areas of the lungs and the regional lymph nodes. Once a cell-mediated hypersensitivity immune response develops, replication of the organism decreases and the bacteria become restricted to developing granulomas.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009525:2802987:2802987280298728044621476Mycobacterium tuberculosis H37Ra, complete genomehypothetical protein0889
NC_008769:2754828:2754828275482827563031476Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomehypothetical protein0886
NC_012207:2747599:2747599274759927490741476Mycobacterium bovis BCG str. Tokyo 172, complete genomehypothetical protein0886
NC_002945:2757821:2757821275782127592961476Mycobacterium bovis AF2122/97, complete genomehypothetical protein0886
NC_002677:1462233:1482817148281714842921476Mycobacterium leprae TN, complete genomehypothetical protein0656
NC_011896:1462258:1482841148284114843161476Mycobacterium leprae Br4923, complete genomehypothetical protein0656
NC_016906:3286384:3304246330424633056701425Gordonia polyisoprenivorans VH2 chromosome, complete genomeO-acyltransferase WSD3e-77289
NC_019673:3582004:3598023359802335994711449Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein2e-45184
NC_016887:3201976:322149832214983222280783Nocardia cyriacigeorgica GUH-2, complete genomediacylglycerol O-acyltransferase3e-28127
NC_006361:1720031:1724560172456017259781419Nocardia farcinica IFM 10152, complete genomehypothetical protein4e-1893.2
NC_009338:5537473:5556568555656855579531386Mycobacterium gilvum PYR-GCK chromosome, complete genomehypothetical protein5e-1892.8
NC_015564:484994:5056065056065069851380Amycolicicoccus subflavus DQS3-9A1 chromosome, complete genomehypothetical protein3e-1790.5
NC_016887:3201976:3218725321872532200411317Nocardia cyriacigeorgica GUH-2, complete genomediacylglycerol O-acyltransferase5e-1789.7
NC_008595:2215244:2246608224660822480081401Mycobacterium avium 104, complete genomeacyltransferase, ws/dgat/mgat subfamily protein5e-1789.7
NC_016804:3407859:3426050342605034274411392Mycobacterium bovis BCG str. Mexico chromosome, complete genomeputative diacylglycerol O-acyltransferase6e-1479.3
NC_012207:3421144:3439335343933534407261392Mycobacterium bovis BCG str. Tokyo 172, complete genomehypothetical protein6e-1479.3
NC_008769:3427254:3446685344668534480761392Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomehypothetical protein6e-1479.3
NC_002945:3429315:3448747344874734501381392Mycobacterium bovis AF2122/97, complete genomehypothetical protein6e-1479.3
NC_008595:1844500:1844550184455018459381389Mycobacterium avium 104, complete genomeacyltransferase, ws/dgat/mgat subfamily protein1e-1274.7
NC_014366:1814000:1816330181633018178111482Gamma proteobacterium HdN1, complete genomehypothetical protein2e-1067.8
NC_007645:5160133:5164416516441651657921377Hahella chejuensis KCTC 2396, complete genomehypothetical protein2e-1067.8
NC_015564:484994:5038515038515056051755Amycolicicoccus subflavus DQS3-9A1 chromosome, complete genomeWS/DGAT/MGAT family acyltransferase3e-0963.5
NC_009348:2125698:2162408216240821638381431Aeromonas salmonicida subsp. salmonicida A449, complete genomehypothetical protein5e-0963.2
NC_015848:3851230:3854660385466038560001341Mycobacterium canettii CIPT 140010059, complete genomehypothetical protein3e-0860.5
NC_002945:3735141:3738572373857237399121341Mycobacterium bovis AF2122/97, complete genomehypothetical protein3e-0860.5
NC_019950:3818000:3818051381805138193911341Mycobacterium canettii CIPT 140060008 complete genomeConserved protein of unknown function, possible triacylglycerol synthase (diacylglycerol acyltransferase)3e-0860.5
NC_012207:3766978:3770409377040937717491341Mycobacterium bovis BCG str. Tokyo 172, complete genomehypothetical protein3e-0860.5
NC_008769:3769065:3772496377249637738361341Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomehypothetical protein3e-0860.5
NC_002755:3773734:3777165377716537785051341Mycobacterium tuberculosis CDC1551, complete genomehypothetical protein3e-0860.5
NC_009565:3793976:3797407379740737987471341Mycobacterium tuberculosis F11, complete genomehypothetical protein3e-0860.5
NC_000962:3781501:3784932378493237862721341Mycobacterium tuberculosis H37Rv, complete genomehypothetical protein3e-0860.5
NC_009525:3794000:3794055379405537953951341Mycobacterium tuberculosis H37Ra, complete genomehypothetical protein3e-0860.5
NC_012943:3777371:3780802378080237821421341Mycobacterium tuberculosis KZN 1435 chromosome, complete genomehypothetical protein3e-0860.5
NC_016768:3774105:3777536377753637788761341Mycobacterium tuberculosis KZN 4207 chromosome, complete genomehypothetical protein3e-0860.5
NC_017026:3754000:3754183375418337555231341Mycobacterium tuberculosis RGTB327 chromosome, complete genomehypothetical protein3e-0860.5
NC_014366:1435785:1463485146348514649091425Gamma proteobacterium HdN1, complete genomeUncharacterised protein family (UPF0089)5e-0859.7
NC_015953:2349503:2386347238634723876601314Streptomyces sp. SirexAA-E chromosome, complete genomehypothetical protein1e-0758.2
NC_007645:1194550:1224986122498612263591374Hahella chejuensis KCTC 2396, complete genomehypothetical protein2e-0757.4