Pre_GI: OUP Neighbours

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Query: NC_002506:207097 Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete

D: 37.898

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.

Number of Neighbours: 60

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_008783:145305Bartonella bacilliformis KC583, complete genome75.6464 %Subject Query26.0032
NC_007520:2391675Thiomicrospira crunogena XCL-2, complete genome76.8199 %Subject Query26.1369
NC_015497:3794000Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome76.9393 %Subject Query26.2889
NC_005140:340000Vibrio vulnificus YJ016 chromosome II, complete sequence77.9412 %Subject Query26.4713
NC_004347:4211241*Shewanella oneidensis MR-1, complete genome76.2806 %Subject Query26.7814
NC_015497:3614817Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genome76.2684 %Subject Query26.8361
NC_009052:3229775Shewanella baltica OS155, complete genome76.6513 %Subject Query27.5596
NC_015731:169989Nitrosomonas sp. Is79A3 chromosome, complete genome78.3241 %Subject Query27.6873
NC_009052:144619*Shewanella baltica OS155, complete genome77.2733 %Subject Query27.7085
NC_015222:1749553*Nitrosomonas sp. AL212 chromosome, complete genome76.8413 %Subject Query27.7237
NC_005140:1820970Vibrio vulnificus YJ016 chromosome II, complete sequence81.2898 %Subject Query27.8788
NC_005140:960261Vibrio vulnificus YJ016 chromosome II, complete sequence78.7837 %Subject ←→ Query28.0411
NC_006370:166000Photobacterium profundum SS9 chromosome 1, complete sequence76.2469 %Subject ←→ Query28.1736
NC_015731:1381737Nitrosomonas sp. Is79A3 chromosome, complete genome78.2966 %Subject ←→ Query28.2344
NC_008577:3485878Shewanella sp. ANA-3 chromosome 1, complete sequence75.8211 %Subject ←→ Query28.3804
NC_009052:1394000*Shewanella baltica OS155, complete genome76.4614 %Subject ←→ Query28.5263
NC_008526:74500*Lactobacillus casei ATCC 334, complete genome80.5055 %Subject ←→ Query28.9383
NC_009052:71058Shewanella baltica OS155, complete genome76.3235 %Subject ←→ Query28.9961
NC_009997:4091371Shewanella baltica OS195, complete genome80.0582 %Subject ←→ Query29.1038
NC_008322:641197*Shewanella sp. MR-7, complete genome75.769 %Subject ←→ Query29.3288
NC_004460:1618892Vibrio vulnificus CMCP6 chromosome II, complete sequence77.9381 %Subject ←→ Query29.7179
NC_015276:565701Marinomonas mediterranea MMB-1 chromosome, complete genome76.3572 %Subject ←→ Query29.7331
NC_008322:722612Shewanella sp. MR-7, complete genome76.3879 %Subject ←→ Query30.0553
NC_009654:4624459Marinomonas sp. MWYL1, complete genome76.4399 %Subject ←→ Query30.4991
NC_004460:973738Vibrio vulnificus CMCP6 chromosome II, complete sequence82.8309 %Subject ←→ Query30.5138
NC_008321:2190000Shewanella sp. MR-4, complete genome78.5355 %Subject ←→ Query30.7271
NC_008321:3232000Shewanella sp. MR-4, complete genome78.1403 %Subject ←→ Query30.7332
NC_007520:1940120*Thiomicrospira crunogena XCL-2, complete genome75.9589 %Subject ←→ Query31.019
NC_010161:1949637Bartonella tribocorum CIP 105476, complete genome75.6066 %Subject ←→ Query31.1808
NC_008577:2910383*Shewanella sp. ANA-3 chromosome 1, complete sequence77.4173 %Subject ←→ Query31.1953
NC_010161:2548254Bartonella tribocorum CIP 105476, complete genome75.9681 %Subject ←→ Query31.3939
NC_008321:458811Shewanella sp. MR-4, complete genome77.2028 %Subject ←→ Query31.5836
NC_004459:1794540*Vibrio vulnificus CMCP6 chromosome I, complete sequence81.6146 %Subject ←→ Query31.6148
NC_007520:2128178*Thiomicrospira crunogena XCL-2, complete genome76.5931 %Subject ←→ Query31.6498
NC_009654:4716417Marinomonas sp. MWYL1, complete genome78.3456 %Subject ←→ Query32.6103
NC_015581:1043394Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome77.4939 %Subject ←→ Query32.6716
NC_014334:589526Lactobacillus casei str. Zhang chromosome, complete genome77.598 %Subject ←→ Query32.7578
NC_008321:4631866Shewanella sp. MR-4, complete genome76.1244 %Subject ←→ Query32.8275
NC_002505:980595Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete75.8885 %Subject ←→ Query33.004
NC_013198:1921500*Lactobacillus rhamnosus GG, complete genome75.2727 %Subject ←→ Query33.277
NC_008321:1636148*Shewanella sp. MR-4, complete genome77.5613 %Subject ←→ Query33.2895
NC_004460:1313468Vibrio vulnificus CMCP6 chromosome II, complete sequence80.769 %Subject ←→ Query33.3414
NC_008577:4907497Shewanella sp. ANA-3 chromosome 1, complete sequence75.4841 %Subject ←→ Query33.4058
NC_015559:3645181Marinomonas posidonica IVIA-Po-181 chromosome, complete genome77.6164 %Subject ←→ Query33.4326
NC_002505:2537655*Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete79.3842 %Subject ←→ Query33.5512
NC_015581:1133775*Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome75.8609 %Subject ←→ Query33.7044
NC_008322:1708631*Shewanella sp. MR-7, complete genome78.22 %Subject ←→ Query33.7062
NC_015572:1Methylomonas methanica MC09 chromosome, complete genome77.0374 %Subject ←→ Query34.0009
NC_015276:2023663Marinomonas mediterranea MMB-1 chromosome, complete genome75.2941 %Subject ←→ Query34.0303
NC_015572:1421782Methylomonas methanica MC09 chromosome, complete genome75.0306 %Subject ←→ Query34.0502
NC_015559:2434000*Marinomonas posidonica IVIA-Po-181 chromosome, complete genome77.6899 %Subject ←→ Query34.7215
NC_008577:1690946*Shewanella sp. ANA-3 chromosome 1, complete sequence79.0901 %Subject ←→ Query34.9418
NC_010554:2646806Proteus mirabilis HI4320, complete genome81.1397 %Subject ←→ Query35.3988
NC_004459:1679335*Vibrio vulnificus CMCP6 chromosome I, complete sequence76.8995 %Subject ←→ Query35.7874
NC_008321:3964414Shewanella sp. MR-4, complete genome76.8229 %Subject ←→ Query36.1551
NC_010995:4525119Cellvibrio japonicus Ueda107, complete genome79.3444 %Subject ←→ Query36.7553
NC_015572:4916430Methylomonas methanica MC09 chromosome, complete genome76.5411 %Subject ←→ Query37.6362
NC_002505:168532Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete83.2169 %Subject ←→ Query38.3098
NC_009092:1441813Shewanella loihica PV-4, complete genome75.7108 %Subject ←→ Query42.2476
NC_010611:240839Acinetobacter baumannii ACICU, complete genome79.5404 %Subject Query48.2217