Pre_GI Gene

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Host: NC_004347 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_004347:4211241 Shewanella oneidensis MR-1, complete genome

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
421124142124221182cystathionine gamma-synthaseQuickGO ontologyBLASTP
42126264212940315transcriptional repressor protein MetJQuickGO ontologyBLASTP
42130374213780744hypothetical proteinBLASTP
42139324214876945polysulfide reductase subunit CQuickGO ontologyBLASTP
42148794215445567polysulfide reductase subunit BQuickGO ontologyBLASTP
421545842177402283polysulfide reductase subunit AQuickGO ontologyBLASTP
42183854219182798mcbg protein putativeQuickGO ontologyBLASTP
421969342207961104phosphoribosylaminoimidazole-succinocarboxamide synthaseQuickGO ontologyBLASTP
422144442235522109hypothetical proteinBLASTP
42240374224822786hypothetical proteinBLASTP
42250874225800714hypothetical proteinBLASTP
42259754226100126hypothetical protein
422619242276371446MiaB-like putative RNA modifying enzyme YliGQuickGO ontologyBLASTP
42281004228348249hypothetical proteinBLASTP
42287304229467738hypothetical protein
422964842317742127TonB-dependent receptor putativeQuickGO ontologyBLASTP
423189242332351344pmba proteinQuickGO ontologyBLASTP
42333974233930534hypothetical proteinBLASTP
423395942364392481hypothetical proteinBLASTP