Pre_GI: BLASTP Hits

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Query: NC_017218:273503:280906 Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genome

Start: 280906, End: 281694, Length: 789

Host Lineage: Bifidobacterium breve; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is one of the first colonizers of the human gastrointestinal tract, and is a dominant member of the adult intestinal microbial community. Probiotics are live microbial supplements which benefit the health of an animal by maintaining normal microbial flora, producing vitamins, and stimulating the mucosal immune system




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014169:231210:238629238629239417789Bifidobacterium longum subsp. longum JDM301 chromosome, completerestriction endonuclease5e-156550
NC_014638:183115:197199197199197990792Bifidobacterium bifidum PRL2010 chromosome, complete genometype II restriction-modification system restriction subunit5e-140496
NC_008618:1526392:153285015328501533620771Bifidobacterium adolescentis ATCC 15703, complete genomepossible restriction endonuclease3e-61234
NC_008529:1042220:105313110531311053916786Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completePredicted restriction endonuclease3e-38158
NC_016510:1749967:175462017546201755393774Flavobacterium columnare ATCC 49512 chromosome, complete genomerestriction endonuclease3e-31135
NC_008800:575141:589409589409590173765Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein5e-31134
NC_015224:610807:622685622685623449765Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein5e-31134
NC_011059:65414:693516935170124774Prosthecochloris aestuarii DSM 271, complete genomeputative restriction endonuclease4e-30131
NC_010995:4460413:447291044729104473668759Cellvibrio japonicus Ueda107, complete genomehypothetical protein4e-25115
NC_014033:772754:784512784512785339828Prevotella ruminicola 23 chromosome, complete genomehypothetical protein1e-1790.1
NC_009656:6224221:624468362446836245624942Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein2e-1686.3
NC_017986:1885613:191158619115861912419834Pseudomonas putida ND6 chromosome, complete genomehypothetical protein6e-1581.3
NC_010172:280092:294982294982295788807Methylobacterium extorquens PA1, complete genomeputative restriction endonuclease1e-1480.5
NC_004631:4687270:469954046995404700415876Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-1479.7
NC_015590:145353:153201153201154082882Sinorhizobium meliloti AK83 chromosome 1, complete sequencehypothetical protein3e-1479
NC_007645:5747721:575324057532405753959720Hahella chejuensis KCTC 2396, complete genomepredicted restriction endonuclease3e-1479
NC_011294:4560902:458020745802074580917711Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein4e-1478.6
NC_011205:4718239:473754547375454738255711Salmonella enterica subsp. enterica serovar Dublin str. CT_020218534e-1478.6
NC_012125:4716000:473747647374764738351876Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein7e-1477.8
NC_006905:4638707:466016146601614661036876Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein7e-1477.8
NC_011080:4703266:472206147220614722759699Salmonella enterica subsp. enterica serovar Newport str. SL254,1e-1377
NC_011149:4677412:470819447081944709069876Salmonella enterica subsp. enterica serovar Agona str. SL483,HNH nuclease2e-1376.6
NC_012811:1105395:111214011121401112946807Methylobacterium extorquens AM1 megaplasmid, complete sequenceputative restriction endonuclease2e-1376.3
CP002185:4750571:475615847561584757033876Escherichia coli W, complete genomehypothetical protein2e-1375.9
NC_020211:554736:564967564967565842876Serratia marcescens WW4, complete genomeHNH nuclease2e-1375.9
NC_016816:3952000:395795439579543958823870Pantoea ananatis LMG 5342, complete genomeHNH nuclease3e-1375.5
NC_012490:4425456:443253844325384433425888Rhodococcus erythropolis PR4, complete genomehypothetical protein5e-1375.1
NC_012912:4167429:418072641807264181598873Dickeya zeae Ech1591, complete genomehypothetical protein7e-1374.7
NC_009665:3869904:388223138822313883046816Shewanella baltica OS185 chromosome, complete genomehypothetical protein7e-1374.3
NC_013364:5255700:526567852656785266550873Escherichia coli O111:H- str. 11128, complete genomeputative restriction endonuclease8e-1374.3
NC_011147:4460726:448777644877764488651876Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein1e-1273.9
NC_015711:3122000:312514631251463125949804Myxococcus fulvus HW-1 chromosome, complete genomehypothetical protein1e-1273.9
NC_011601:4856717:487357148735714874476906Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomerestriction endonuclease1e-1273.6
NC_011750:4978000:498298549829854983914930Escherichia coli IAI39 chromosome, complete genomehypothetical protein1e-1273.6
NC_006677:1596560:166093616609361661688753Gluconobacter oxydans 621H, complete genomePutative restriction endonuclease1e-1273.6
CP002516:4199133:421402542140254214897873Escherichia coli KO11, complete genomeputative restriction endonuclease2e-1273.2
CP002185:4791811:479797347979734798845873Escherichia coli W, complete genomeputative restriction endonuclease2e-1273.2
NC_016902:4199133:421402542140254214897873Escherichia coli KO11FL chromosome, complete genomeputative restriction endonuclease2e-1273.2
NC_009800:4529504:454053345405334541405873Escherichia coli HS, complete genomehypothetical protein3e-1272.8
NC_009801:4882684:489775948977594898631873Escherichia coli E24377A, complete genomehypothetical protein2e-1272.8
NC_010498:4899167:490680749068074907679873Escherichia coli SMS-3-5, complete genomehypothetical protein2e-1272.8
NC_008253:4817864:484076148407614841633873Escherichia coli 536, complete genomehypothetical protein2e-1272.8
NC_007946:4875997:490026349002634901168906Escherichia coli UTI89, complete genomehypothetical protein2e-1272.8
NC_008563:4905186:491649249164924917397906Escherichia coli APEC O1, complete genomehypothetical protein2e-1272.8
NC_013421:1819036:182912118291211829996876Pectobacterium wasabiae WPP163, complete genomehypothetical protein4e-1272
NC_009436:522649:545015545015545908894Enterobacter sp. 638, complete genomehypothetical protein4e-1272
NC_014121:677799:695610695610696479870Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein6e-1271.2
NC_008686:1472899:148270214827021483478777Paracoccus denitrificans PD1222 chromosome 1, complete sequenceputative restriction endonuclease1e-1170.5
NC_011138:3881446:388994938899493890719771Alteromonas macleodii 'Deep ecotype', complete genomehypothetical protein2e-1170.1
NC_016514:506611:527739527739528614876Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein2e-1169.3
NC_015572:3091707:309988330998833100662780Methylomonas methanica MC09 chromosome, complete genomehypothetical protein2e-1169.3
NC_010002:5143869:515651451565145157449936Delftia acidovorans SPH-1, complete genomehypothetical protein2e-1169.3
NC_007952:3196085:321139932113993212238840Burkholderia xenovorans LB400 chromosome 2, complete sequencehypothetical protein4e-1168.6
NC_020418:116500:121820121820122602783Morganella morganii subsp. morganii KT, complete genomehypothetical protein1e-1067.4
NC_007613:4403070:440931644093164410188873Shigella boydii Sb227, complete genomehypothetical protein1e-1067.4
NC_016845:575123:598562598562599431870Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein1e-1067
NC_012856:207194:221844221844222791948Ralstonia pickettii 12D chromosome 1, complete genomehypothetical protein1e-1067
NC_011283:4966471:497394749739474974816870Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein1e-1067
NC_013850:4829455:483627748362774837146870Klebsiella variicola At-22 chromosome, complete genomehypothetical protein2e-1066.6
NC_013209:2476039:248321524832152484177963Acetobacter pasteurianus IFO 3283-01, complete genomehypothetical protein2e-1066.6
NC_017100:2476822:248442224844222485384963Acetobacter pasteurianus IFO 3283-03, complete genomehypothetical protein2e-1066.6
NC_017108:2474583:248175924817592482721963Acetobacter pasteurianus IFO 3283-12, complete genomehypothetical protein2e-1066.6
NC_017111:2474601:248177724817772482739963Acetobacter pasteurianus IFO 3283-32, complete genomehypothetical protein2e-1066.6
NC_017121:2474588:248176424817642482726963Acetobacter pasteurianus IFO 3283-07, complete genomehypothetical protein2e-1066.6
NC_017125:2476802:248440224844022485364963Acetobacter pasteurianus IFO 3283-22, complete genomehypothetical protein2e-1066.6
NC_017146:2476844:248444424844442485406963Acetobacter pasteurianus IFO 3283-26, complete genomehypothetical protein2e-1066.6
NC_017150:2383361:239096123909612391923963Acetobacter pasteurianus IFO 3283-01-42C, complete genomehypothetical protein2e-1066.6
NC_016818:4215836:423289242328924233764873Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative restriction endonuclease3e-1065.9
NC_018524:4235773:425573042557304256701972Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeHNH endonuclease family protein3e-1065.5
NC_011353:5426793:543245554324555433306852Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeHNH nuclease5e-1065.1
NC_013008:5382917:538851653885165389367852Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein5e-1065.1
NC_014923:2888723:289292728929272893922996Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completehypothetical protein4e-1065.1
NC_015381:1588742:159024015902401591226987Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein9e-1063.9
NC_017093:8518961:853191985319198532890972Actinoplanes missouriensis 431, complete genomehypothetical protein1e-0963.5
NC_007712:2978000:298900229890022989754753Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein2e-0962.8
NC_002695:5352554:535880753588075359658852Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein3e-0962.8
NC_020156:1565500:158153715815371582511975Nonlabens dokdonensis DSW-6, complete genomeHNH endonuclease family protein3e-0962.4
NC_002655:5382557:538881053888105389694885Escherichia coli O157:H7 EDL933, complete genomehypothetical protein3e-0962.4
NC_013941:5192500:519707251970725197956885Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein3e-0962.4
NC_015761:4355335:435922743592274360006780Salmonella bongori NCTC 12419, complete genomehypothetical protein4e-0962
NC_014019:2711500:272741227274122728302891Bacillus megaterium QM B1551 chromosome, complete genomehypothetical protein4e-0962
NC_008322:722612:729171729171730019849Shewanella sp. MR-7, complete genomehypothetical protein5e-0961.6
NC_014012:2411096:241959224195922420461870Shewanella violacea DSS12, complete genomehypothetical protein5e-0961.6
NC_015152:2831566:283478428347842835692909Spirochaeta sp. Buddy chromosome, complete genomerestriction endonuclease7e-0961.2
NC_007760:4055860:4069310406931040706981389Anaeromyxobacter dehalogenans 2CP-C, complete genomehypothetical protein6e-0961.2
NC_020064:1962172:197100519710051971904900Serratia marcescens FGI94, complete genomehypothetical protein9e-0960.8
NC_012731:600518:628576628576629355780Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative restriction endonuclease1e-0860.8
NC_009648:5119271:514226151422615143040780Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein1e-0860.8
NC_015436:1287873:130861913086191309524906Spirochaeta coccoides DSM 17374 chromosome, complete genomehypothetical protein1e-0860.5
NC_013410:2586500:2593159259315925942141056Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein1e-0860.5
NC_013440:971717:9896599896599907351077Haliangium ochraceum DSM 14365, complete genomehypothetical protein1e-0860.1
NC_014306:4376012:439702443970244397896873Erwinia billingiae Eb661, complete genomeConserved uncharacterized protein1e-0860.1
NC_012778:1819559:1856313185631318574731161Eubacterium eligens ATCC 27750, complete genomeputative restriction endonuclease2e-0860.1
NC_009792:3225965:324036632403663241145780Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-0859.7
NC_014151:3611956:362318936231893624082894Cellulomonas flavigena DSM 20109 chromosome, complete genomehypothetical protein2e-0859.7
NC_008825:3161146:316777031677703168696927Methylibium petroleiphilum PM1, complete genomehypothetical protein3e-0859.3
NC_014729:1185294:122704112270411227994954Halogeometricum borinquense DSM 11551 chromosome, complete genomehypothetical protein2e-0859.3
NC_015136:2021799:202910520291052029803699Burkholderia sp. CCGE1001 chromosome 1, complete sequenceHNH nuclease4e-0858.5
NC_020063:4127161:413034841303484131286939Enterobacteriaceae bacterium strain FGI 57, complete genomeputative restriction endonuclease5e-0858.5
NC_010943:3069082:310963831096383110534897Stenotrophomonas maltophilia K279a, complete genomehypothetical protein5e-0858.2
NC_008825:1258500:129129912912991292225927Methylibium petroleiphilum PM1, complete genomehypothetical protein7e-0857.8
NC_008826:170609:173764173764174690927Methylibium petroleiphilum PM1 plasmid RPME01, complete sequencehypothetical protein7e-0857.8
NC_011891:4450031:446755944675594468506948Anaeromyxobacter dehalogenans 2CP-1, complete genomerestriction endonuclease-like protein9e-0857.4
NC_008095:2497842:251235225123522513320969Myxococcus xanthus DK 1622, complete genomehypothetical protein9e-0857.4
NC_009937:4392108:440932444093244410223900Azorhizobium caulinodans ORS 571, complete genomehypothetical protein2e-0756.2
NC_014729:1248782:1252219125221912532621044Halogeometricum borinquense DSM 11551 chromosome, complete genomehypothetical protein2e-0756.2
NC_007964:4157500:416799641679964168388393Nitrobacter hamburgensis X14, complete genome3e-0755.8
NC_020418:116500:120817120817121689873Morganella morganii subsp. morganii KT, complete genomehypothetical protein5e-0755.1
NC_014830:1602198:161001616100161610855840Intrasporangium calvum DSM 43043 chromosome, complete genomehypothetical protein5e-0755.1
NC_011144:1073944:108376110837611084681921Phenylobacterium zucineum HLK1, complete genomerestriction endonuclease9e-0754.3
NC_010067:3056774:307063430706343071506873Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-0653.9
NC_014366:2703226:272242027224202722923504Gamma proteobacterium HdN1, complete genomehypothetical protein1e-0653.5
NC_018581:2768743:282364528236452824526882Gordonia sp. KTR9 chromosome, complete genomeputative restriction endonuclease2e-0653.1
NC_015136:2021799:202808020280802029048969Burkholderia sp. CCGE1001 chromosome 1, complete sequenceHNH nuclease2e-0653.1
NC_017322:1260526:127283612728361273747912Sinorhizobium meliloti BL225C chromosome, complete genomehypothetical protein4e-0652
NC_019792:2524130:256348725634872564287801Natronobacterium gregoryi SP2 chromosome, complete genomehypothetical protein5e-0652