Pre_GI: BLASTP Hits

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Query: NC_014323:5051041:5070673 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 5070673, End: 5071959, Length: 1287

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009138:1583988:1587664158766415889621299Herminiimonas arsenicoxydans, complete genomeCobalt-zinc-cadmium resistance protein czcC precursor (Cation efflux system protein czcC)2e-101370
NC_009138:519965:5232805232805245691290Herminiimonas arsenicoxydans, complete genomedivalent cation efflux system periplasmic protein CzcC1e-96353
NC_012968:1594954:1626466162646616277311266Methylotenera mobilis JLW8, complete genomeouter membrane efflux protein7e-95347
NC_008782:1917634:1928110192811019294651356Acidovorax sp. JS42, complete genomeouter membrane efflux protein1e-93343
NC_009659:1984980:2003846200384620051351290Janthinobacterium sp. Marseille chromosome, complete genomecobalt-zinc-cadmium outer membrane resistance protein czcC2e-90332
NC_014910:242845:2515782515782529031326Alicycliphilus denitrificans BC chromosome, complete genomeouter membrane efflux protein1e-87323
NC_015422:3513689:3533957353395735352581302Alicycliphilus denitrificans K601 chromosome, complete genomeouter membrane efflux protein2e-87322
NC_010002:1879220:1906105190610519074361332Delftia acidovorans SPH-1, complete genomeouter membrane efflux protein4e-76285
NC_003296:612000:6124006124006137251326Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE COBALT-ZINC-CADMIUM OUTER MEMBRANE RESISTANCE PROTEIN2e-74280
NC_008752:2724977:2740441274044127417511311Acidovorax avenae subsp. citrulli AAC00-1, complete genomeouter membrane efflux protein5e-69262
NC_013446:2820000:2835724283572428370011278Comamonas testosteroni CNB-2, complete genomeouter membrane efflux protein2e-68259
NC_015222:523915:5445795445795460061428Nitrosomonas sp. AL212 chromosome, complete genomeouter membrane efflux protein1e-60234
NC_010170:4800000:4868326486832648696151290Bordetella petrii, complete genomemetal ion efflux outer membrane protein, putative3e-60232
NC_009439:1297851:1323417132341713246671251Pseudomonas mendocina ymp, complete genomeouter membrane efflux protein1e-57224
NC_009434:3611738:3697189369718936984301242Pseudomonas stutzeri A1501, complete genomecobalt-zinc-cadmium resistance protein CzcC, putative4e-54212
NC_015740:1291739:1303598130359813048391242Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completecobalt-zinc-cadmium resistance protein CzcC5e-54212
NC_017986:2548720:2596893259689325980771185Pseudomonas putida ND6 chromosome, complete genomeouter membrane efflux protein2e-52207
NC_002947:8394:5071850718519891272Pseudomonas putida KT2440, complete genomecobalt/zinc/cadmium efflux RND transporter, outer membrane protein, CzcC family2e-52206
NC_010501:30000:6741067410686811272Pseudomonas putida W619, complete genomeouter membrane efflux protein2e-52206
NC_010322:29983:6347663476647471272Pseudomonas putida GB-1 chromosome, complete genomeouter membrane efflux protein2e-52206
NC_009512:27783:6269462694638781185Pseudomonas putida F1, complete genomeouter membrane efflux protein2e-52206
NC_009720:670853:6901676901676914831317Xanthobacter autotrophicus Py2, complete genomeouter membrane efflux protein2e-30134
NC_009720:4406991:4406991440699144082621272Xanthobacter autotrophicus Py2, complete genomeouter membrane efflux protein3e-30133
NC_009485:7626677:7633328763332876346021275Bradyrhizobium sp. BTAi1 chromosome, complete genomeouter membrane cobalt-zinc-cadmium resistance protein czcC4e-30132
NC_008347:2515921:2551320255132025526331314Maricaulis maris MCS10, complete genomeouter membrane efflux protein4e-26119
NC_015733:5909821:594451559445155945135621Pseudomonas putida S16 chromosome, complete genomeCzcC family cobalt/zinc/cadmium efflux transporter outer membrane protein6e-26118
NC_011004:2507566:2529112252911225303831272Rhodopseudomonas palustris TIE-1, complete genomeouter membrane efflux protein1e-24114
NC_011004:2457778:2488205248820524894761272Rhodopseudomonas palustris TIE-1, complete genomeouter membrane efflux protein3e-22106
NC_007958:2370619:2400563240056324018341272Rhodopseudomonas palustris BisB5, complete genomeouter membrane efflux protein1e-21104
NC_008347:2515921:2533414253341425347001287Maricaulis maris MCS10, complete genomeouter membrane efflux protein2e-1997.1
NC_012982:711122:7591397591397604251287Hirschia baltica ATCC 49814, complete genomeouter membrane efflux protein3e-1893.2
NC_011146:2200142:2240273224027322415711299Geobacter bemidjiensis Bem, complete genomeouter membrane efflux protein9e-1788.6
NC_016616:915755:9157559157559170021248Dechlorosoma suillum PS chromosome, complete genomeouter membrane protein2e-1687.4
NC_018868:619113:6410036410036423311329Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeouter membrane efflux protein6e-1685.5
NC_002939:2315402:2354577235457723558901314Geobacter sulfurreducens PCA, complete genomemetal ion efflux outer membrane protein family protein, putative1e-1481.3
NC_002939:2337402:2354577235457723558901314Geobacter sulfurreducens PCA, complete genomemetal ion efflux outer membrane protein family protein, putative1e-1481.3
NC_018678:554675:5773025773025785851284Alteromonas macleodii str. 'English Channel 673' chromosome,cobalt-zinc-cadmium cation efflux system outer membrane protein, CzcC family9e-1478.6
NC_020541:2191600:2190188219018821916031416Rhodanobacter sp. 2APBS1, complete genomeouter membrane protein1e-1377.8
NC_008345:4107847:4107847410784741091961350Shewanella frigidimarina NCIMB 400, complete genomeouter membrane efflux protein5e-1375.9
NC_002942:1109618:1125522112552211268591338Legionella pneumophila subsp. pneumophila str. Philadelphia 1,chemiosmotic efflux system C protein C7e-1375.5
NC_006368:2684358:2695359269535926966721314Legionella pneumophila str. Paris, complete genomeChemiosmotic efflux system C protein C1e-1275.1
NC_011138:318168:3343263343263355281203Alteromonas macleodii 'Deep ecotype', complete genomeOuter membrane efflux protein1e-1274.3
NC_002977:2254440:2269135226913522704481314Methylococcus capsulatus str. Bath, complete genomeouter membrane efflux protein2e-1274.3
NC_009659:1923925:1958319195831919596081290Janthinobacterium sp. Marseille chromosome, complete genomeouter membrane efflux protein2e-1273.9
NC_014315:1744485:1747630174763017490901461Nitrosococcus watsoni C-113 chromosome, complete genomeouter membrane efflux protein7e-1272
NC_007520:2305610:2320746232074623220531308Thiomicrospira crunogena XCL-2, complete genomeOuter membrane efflux protein9e-1272
NC_008782:2857899:2871796287179628730701275Acidovorax sp. JS42, complete genomeouter membrane efflux protein1e-1171.6
NC_016616:2768053:2789813278981327910841272Dechlorosoma suillum PS chromosome, complete genomeouter membrane protein3e-1170.1
NC_014394:738365:7534557534557547081254Gallionella capsiferriformans ES-2 chromosome, complete genomeouter membrane efflux protein4e-1169.7
NC_011992:2279752:2325391232539123266651275Acidovorax ebreus TPSY, complete genomeouter membrane efflux protein6e-1169.3
NC_016616:1091606:1104832110483211061031272Dechlorosoma suillum PS chromosome, complete genomeouter membrane protein2e-1067.4
NC_015422:2858228:2873637287363728749111275Alicycliphilus denitrificans K601 chromosome, complete genomeouter membrane efflux protein3e-1067
NC_008782:1510000:1534916153491615361901275Acidovorax sp. JS42, complete genomeouter membrane efflux protein3e-1067
NC_007484:1694738:1710395171039517118551461Nitrosococcus oceani ATCC 19707, complete genomeOuter membrane efflux protein5e-1066.2
NC_016147:623666:6431416431416442591119Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeouter membrane efflux protein2e-0964.3
NC_010943:2465976:2486816248681624880931278Stenotrophomonas maltophilia K279a, complete genomeputative cobalt-zinc-cadmium resistance protein5e-0962.8
NC_015410:2258800:2261062226106222624621401Pseudomonas mendocina NK-01 chromosome, complete genomeouter membrane efflux protein7e-0962
NC_018697:1343756:1359083135908313602911209Cycloclasticus sp. P1 chromosome, complete genomeOuter membrane efflux protein2e-0860.8
NC_018697:1343756:1385862138586213871721311Cycloclasticus sp. P1 chromosome, complete genomeCobalt/zinc/cadmium efflux RND transporter,outermembrane protein3e-0860.5
NC_015740:2692023:2696797269679726980831287Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeouter membrane protein3e-0860.1
NC_009438:236424:2479862479862492301245Shewanella putrefaciens CN-32 chromosome, complete genomeouter membrane efflux protein4e-0859.7
NC_013894:1194458:1216513121651312177121200Thermocrinis albus DSM 14484 chromosome, complete genomeouter membrane efflux protein4e-0756.6
NC_007947:1703326:1703326170332617047711446Methylobacillus flagellatus KT, complete genomeRND efflux system, outer membrane lipoprotein, NodT9e-0755.1
NC_013851:2441407:2443743244374324450861344Allochromatium vinosum DSM 180 chromosome, complete genometype I secretion outer membrane protein, TolC family1e-0654.7
NC_014734:1049273:1067581106758110690921512Paludibacter propionicigenes WB4 chromosome, complete genomeouter membrane efflux protein2e-0654.3
NC_004547:442927:4819144819144833351422Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative outer membrane efflux protein2e-0654.3
NC_013730:1572889:1588065158806515893931329Spirosoma linguale DSM 74, complete genomeouter membrane efflux protein4e-0653.1
NC_006672:47610:5890058900601591260Gluconobacter oxydans 621H plasmid pGOX1, complete sequenceRND-type multidrug efflux pump, outer membrane protein4e-0652.8
NC_003062:2506959:2525229252522925267701542Agrobacterium tumefaciens str. C58 chromosome circular, completehypothetical protein7e-0652.4