Pre_GI: BLASTP Hits

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Query: NC_012668:1623350:1644773 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 1644773, End: 1646092, Length: 1320

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012668:2258854:2281544228154422828631320Vibrio cholerae MJ-1236 chromosome 1, complete sequenceHipA protein0889
NC_012668:160357:1663781663781676971320Vibrio cholerae MJ-1236 chromosome 1, complete sequenceHipA protein0889
NC_015633:2565753:2582282258228225836011320Vibrio anguillarum 775 chromosome chromosome I, complete sequenceHipA0754
CP002185:1681327:1703053170305317043751323Escherichia coli W, complete genomeregulator with HipB1e-77290
CP002516:2395578:2401473240147324027951323Escherichia coli KO11, complete genomeHipA N-terminal domain protein1e-77290
NC_016902:2395578:2401473240147324027951323Escherichia coli KO11FL chromosome, complete genomeHipA N-terminal domain-containing protein1e-77290
CU928160:1579375:1601102160110216024241323Escherichia coli IAI1 chromosome, complete genomeregulator with hipB2e-77290
NC_011741:1579375:1601102160110216024241323Escherichia coli IAI1 chromosome, complete genomeregulator with hipB2e-77290
NC_010468:2345781:2351690235169023530121323Escherichia coli ATCC 8739, complete genomeHipA N-terminal domain protein2e-77290
NC_010473:1661000:1678503167850316798251323Escherichia coli str. K-12 substr. DH10B, complete genomeregulator with hipB2e-77290
AC_000091:1574000:1592568159256815938901323Escherichia coli W3110 DNA, complete genomeregulator with hipB2e-77290
NC_000913:1570431:1588878158887815902001323Escherichia coli K12, complete genomeregulator with hipB2e-77290
NC_009800:1589000:1607677160767716089991323Escherichia coli HS, complete genomeprotein HipA2e-77290
NC_012759:1462490:1480937148093714822591323Escherichia coli BW2952 chromosome, complete genomeregulator with hipB2e-77290
NC_012947:2228235:2232110223211022334321323Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeHipA N-terminal domain protein2e-77290
NC_012967:1546000:1567421156742115687431323Escherichia coli B str. REL606 chromosome, complete genomeregulator with hipB2e-77290
CP002797:1591000:1604080160408016053811302Escherichia coli NA114, complete genomeHipA protein3e-77289
NC_011742:1574036:1591112159111215924341323Escherichia coli S88 chromosome, complete genomeregulator with hipB9e-77287
NC_020063:2230000:2255666225566622569791314Enterobacteriaceae bacterium strain FGI 57, complete genomeHipA domain-containing protein1e-76287
NC_007954:334795:3419373419373432441308Shewanella denitrificans OS217, complete genomeHipA-like protein2e-75283
NC_021066:1393750:1414359141435914156901332Raoultella ornithinolytica B6, complete genomepersistence to inhibition of murein or DNA biosynthesis, DNA-binding regulator3e-73276
NC_007384:1696831:1696831169683116981521322Shigella sonnei Ss046, complete genome1e-67257
NC_014965:997344:1023026102302610243541329Vibrio vulnificus MO6-24/O chromosome I, complete sequenceHipA protein2e-67256
NC_004459:2025436:2039667203966720409951329Vibrio vulnificus CMCP6 chromosome I, complete sequenceHipA-like protein6e-65248
NC_002655:1966464:1972050197205019730721023Escherichia coli O157:H7 EDL933, complete genomepersistence to inhibition of murein or DNA biosynthesis, DNA-binding regulator4e-58226
NC_014973:4174668:4178934417893441802501317Geobacter sp. M18 chromosome, complete genomeHipA N-terminal domain-containing protein5e-58225
NC_009838:81913:8633986339876641326Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequenceputative capsule biosynthesis protein4e-56219
NC_020181:3328844:3334219333421933357331515Enterobacter aerogenes EA1509E, complete genomeHipA protein2e-55217
NC_015566:547387:5553105553105566081299Serratia sp. AS12 chromosome, complete genomeHipA N-terminal domain-containing protein4e-55215
NC_015567:547500:5554965554965567941299Serratia sp. AS9 chromosome, complete genomeHipA N-terminal domain-containing protein4e-55215
NC_007953:1434705:1439954143995414412881335Burkholderia xenovorans LB400 chromosome 3, complete sequencehypothetical protein6e-54211
NC_011149:4677412:4692627469262746939551329Salmonella enterica subsp. enterica serovar Agona str. SL483,protein HipA2e-53210
NC_015138:5046921:5051982505198250533041323Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeHipA N-terminal domain-containing protein3e-52206
NC_017075:1:1110611106124491344Rubrivivax gelatinosus IL144, complete genomeHipA N-terminal domain-containing protein4e-50199
NC_015563:4583906:4597729459772945990361308Delftia sp. Cs1-4 chromosome, complete genomeHipA N-terminal domain-containing protein2e-48193
NC_011750:1849561:186943618694361870125690Escherichia coli IAI39 chromosome, complete genome2e-41170
NC_017219:2292040:2296205229620522975601356Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein2e-34147
NC_011593:2288993:2296387229638722977421356Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,HipA domain-containing protein2e-34147
NC_012918:356019:3612303612303624741245Geobacter sp. M21 chromosome, complete genomeHipA N-terminal domain-containing protein5e-33142
NC_012811:227541:2275412275412288871347Methylobacterium extorquens AM1 megaplasmid, complete sequenceHipA-like protein9e-32138
NC_018000:2964500:2964960296496029662281269Sinorhizobium fredii USDA 257 chromosome, complete genomekinase Y4mE2e-31136
NC_010677:1296000:1308129130812913094871359Francisella tularensis subsp. mediasiatica FSC147, complete genometranscription regulator2e-31137
NC_020304:752012:7586387586387598941257Desulfocapsa sulfexigens DSM 10523, complete genomeHipA domain-containing protein3e-30133
NC_013714:2086526:2137627213762721389281302Bifidobacterium dentium Bd1, complete genomeHipA protein3e-30133
NC_014830:1602198:1611681161168116129581278Intrasporangium calvum DSM 43043 chromosome, complete genomeHipA N-terminal domain protein4e-29129
NC_014246:876000:8813418813418828461506Mobiluncus curtisii ATCC 43063 chromosome, complete genomeputative transcriptional regulator7e-29128
NC_015850:736680:7505247505247517771254Acidithiobacillus caldus SM-1 chromosome, complete genomeprotein HipA2e-28127
NC_010658:1593137:160889416088941609424531Shigella boydii CDC 3083-94, complete genomeprotein HipA1e-27124
NC_014550:3534000:3534949353494935362351287Arthrobacter arilaitensis Re117, complete genomeHipA-like protein2e-27124
NC_011916:467106:4975844975844988551272Caulobacter crescentus NA1000 chromosome, complete genomeprotein hipA3e-26120
NC_002696:2941644:2951498295149829528321335Caulobacter crescentus CB15, complete genomehypothetical protein5e-25115
NC_011916:2967624:2977478297747829788121335Caulobacter crescentus NA1000 chromosome, complete genomehipA-like phosphatidylinositol 3/4-kinase5e-25115
NC_008253:1534840:155134915513491552221873Escherichia coli 536, complete genomehypothetical protein HipA3e-24113
NC_004347:718091:7233087233087246091302Shewanella oneidensis MR-1, complete genomehypothetical protein1e-23111
NC_013172:3093467:3093467309346730947021236Brachybacterium faecium DSM 4810, complete genomeHipA domain-containing protein1e-22107
NC_009092:521519:5361395361395374401302Shewanella loihica PV-4, complete genomeHipA domain protein2e-22107
NC_008322:641197:6499886499886512591272Shewanella sp. MR-7, complete genomeHipA domain protein3e-22106
NC_012586:897148:8971488971488984041257Rhizobium sp. NGR234 plasmid pNGR234b, complete sequenceHipA-like protein2e-1997.1
NC_008278:256427:2701312701312714291299Frankia alni ACN14a, complete genomeputative HipA protein.5e-1995.9
NC_014216:3003347:3003347300334730045641218Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeHipA N-terminal domain protein1e-1894.4
NC_014323:4665610:4695226469522646965451320Herbaspirillum seropedicae SmR1 chromosome, complete genomeHipA domain-containing protein4e-1893.2
NC_014355:1461355:1478780147878014799851206Candidatus Nitrospira defluvii, complete genomeputative serine kinase HipA5e-1892.4
NC_007722:851129:8721938721938734071215Erythrobacter litoralis HTCC2594, complete genomeputative Uncharacterized protein related to capsule biosynthesisenzyme7e-1892
NC_009663:1656804:1660691166069116619771287Sulfurovum sp. NBC37-1, complete genomehypothetical protein4e-1789.7
NC_014151:3797861:3803799380379938050371239Cellulomonas flavigena DSM 20109 chromosome, complete genomeHipA N-terminal domain protein8e-1788.6
NC_009665:2219082:2232566223256622338281263Shewanella baltica OS185 chromosome, complete genomeHipA domain-containing protein6e-1685.9
NC_009997:4091371:4100950410095041022121263Shewanella baltica OS195, complete genomeHipA N-terminal domain protein8e-1685.1
NC_016901:4039335:4048914404891440501761263Shewanella baltica OS678 chromosome, complete genomeHipA N-terminal domain-containing protein8e-1685.1
NC_009997:3988980:3999559399955940008211263Shewanella baltica OS195, complete genomeHipA N-terminal domain protein8e-1685.1
NC_016901:3936944:3947523394752339487851263Shewanella baltica OS678 chromosome, complete genomeHipA N-terminal domain-containing protein8e-1685.1
NC_009665:3869904:3884666388466638859281263Shewanella baltica OS185 chromosome, complete genomeHipA domain-containing protein1e-1585.1
NC_009665:3984080:3994654399465439959161263Shewanella baltica OS185 chromosome, complete genomeHipA domain-containing protein2e-1584.3
NC_012792:627500:6376566376566390261371Variovorax paradoxus S110 chromosome 2, complete genomeHipA N-terminal domain protein3e-1376.6
NC_010815:40357:4453344533457441212Geobacter lovleyi SZ plasmid pGLOV01, complete sequenceHipA N-terminal domain protein7e-1375.5
NC_015635:3542125:3555796355579635569981203Microlunatus phosphovorus NM-1, complete genomehypothetical protein2e-1274.3
NC_010338:426388:4428394428394441311293Caulobacter sp. K31, complete genomeHipA domain protein8e-1272
NC_009648:5119271:513174551317455132260516Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein2e-1170.5
NC_002678:5714000:5715623571562357168851263Mesorhizobium loti MAFF303099, complete genomehypothetical protein2e-1170.5
NC_013940:137713:1545131545131557901278Deferribacter desulfuricans SSM1 megaplasmid pDF308, completehypothetical protein2e-0963.9
NC_015410:3209954:3216219321621932174151197Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein2e-0963.9
NC_009832:622969:630242630242630592351Serratia proteamaculans 568, complete genomehypothetical protein3e-0963.5
NC_016631:4688000:4709199470919947104401242Granulicella mallensis MP5ACTX8 chromosome, complete genomeHipA N-terminal domain-containing protein7e-0962.4
NC_008786:738791:7504987504987518711374Verminephrobacter eiseniae EF01-2, complete genomeHipA domain protein1e-0861.2
NC_009434:695582:7081477081477093431197Pseudomonas stutzeri A1501, complete genomehypothetical protein2e-0860.8
NC_009138:1544835:1556009155600915572291221Herminiimonas arsenicoxydans, complete genomehypothetical protein9e-0755.1
NC_012108:2874831:2874831287483128760901260Desulfobacterium autotrophicum HRM2, complete genomeputative capsule biosynthesis protein HipA9e-0755.5
NC_006513:881120:8831788831788844101233Azoarcus sp. EbN1, complete genomehypothetical protein1e-0655.1
NC_014371:1218813:122696512269651227912948Prevotella melaninogenica ATCC 25845 chromosome chromosome II,toxin-antitoxin system, toxin component, HipA family1e-0655.1
NC_015732:3017387:3039843303984330410271185Spirochaeta caldaria DSM 7334 chromosome, complete genomeHipA N-terminal domain-containing protein1e-0654.7
NC_020304:3751710:3756878375687837581161239Desulfocapsa sulfexigens DSM 10523, complete genomeHipA-like protein4e-0653.1
NC_017518:1843705:1859343185934318605961254Neisseria meningitidis NZ-05/33 chromosome, complete genomehipA family protein9e-0652