Pre_GI Gene

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Host: NC_008278 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008278:256427 Frankia alni ACN14a, complete genome

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2564272599063480conserved hypothetical protein putative ATP dependent helicase domainQuickGO ontologyBLASTP
2599032642224320conserved hypothetical protein putative N-6 Adenine-specific DNA methylase domainQuickGO ontologyBLASTP
264711265328618hypothetical protein
265546265716171hypothetical protein
265658266284627hypothetical protein putative membrane proteinQuickGO ontology
266415266582168hypothetical protein
266661267359699putative Ankyrin-repeat containing proteinQuickGO ontologyBLASTP
267445268365921conserved hypothetical protein putative Corticotropin-lipotropin precursorQuickGO ontologyBLASTP
268352268735384hypothetical protein
268791269072282hypothetical protein
269109269312204hypothetical protein
269648269830183hypothetical protein
269947270162216hypothetical protein putative HTH-type transcriptional regulatorQuickGO ontologyBLASTP
2701312714291299putative HipA proteinQuickGO ontologyBLASTP
2716752729281254hypothetical protein putative HSDR_N domainQuickGO ontologyBLASTP
272998273162165hypothetical protein
2734192774414023conserved hypothetical protein putative superfamily II DNA and RNA helicaseQuickGO ontologyBLASTP
2774412793661926conserved hypothetical proteinQuickGO ontologyBLASTP
279423280265843hypothetical protein putative endonucleaseQuickGO ontologyBLASTP
2802692824072139putative type I restriction system adenine methylaseQuickGO ontologyBLASTP