Pre_GI Gene

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Host: NC_012792 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012792:627500 Variovorax paradoxus S110 chromosome 2, complete genome

Host Lineage: Variovorax paradoxus; Variovorax; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Soil. Variovorax paradoxus S110 is able to grow autotrophically using hydrogen gas and carbon dioxide for energy and carbon. Variovorax paradoxus is a nutritionally diverse organism which is commonly isolated from soil. Strains of this organism are able to degrade a number of compounds such as explosives and pesticides. Variovorax paradoxus is also a plant-growth promoting organism, increasing the resistance of the plant to disease and heavy metals.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
6279936293781386FAD-dependent pyridine nucleotide-disulphide oxidoreductaseQuickGO ontologyBLASTP
6303346316291296porinQuickGO ontologyBLASTP
631815632462648transcriptional regulator TetR familyQuickGO ontologyBLASTP
6326296336451017amidohydrolase 2QuickGO ontologyBLASTP
633691634662972hypothetical proteinBLASTP
634865635437573transcriptional regulator XRE familyQuickGO ontologyBLASTP
635668635955288transcriptional regulator XRE familyQuickGO ontologyBLASTP
636822637028207hypothetical protein
637235637438204transcriptional regulator XRE familyQuickGO ontologyBLASTP
6376566390261371HipA N-terminal domain proteinQuickGO ontologyBLASTP
639013639339327transcriptional regulator XRE familyQuickGO ontology
639757640446690hypothetical protein
640452641171720hypothetical protein
641168641806639RES domain proteinQuickGO ontology
642265642918654putative two component transcriptional regulator winged helix familyQuickGO ontologyBLASTP
6431586503967239conserved repeat domain proteinQuickGO ontology