Pre_GI: BLASTP Hits

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Query: NC_010001:4586000:4598730 Clostridium phytofermentans ISDg, complete genome

Start: 4598730, End: 4599443, Length: 714

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013316:120759:126866126866127618753Clostridium difficile R20291, complete genomegermination-specific N-acetylmuramoyl-L-alanine amidase2e-38159
NC_009089:117980:123166123166123870705Clostridium difficile 630, complete genomegermination-specific N-acetylmuramoyl-L-alanine amidase2e-38159
NC_016584:233486:254592254592255323732Desulfosporosinus orientis DSM 765 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase4e-37154
NC_014209:1910109:191010919101091910789681Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,N-acetylmuramoyl-L-alanine amidase CwlD2e-34145
NC_019970:439969:455935455935456609675Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeN-acetylmuramoyl-L-alanine amidase CwlD5e-33141
NC_019897:329945:329945329945330784840Thermobacillus composti KWC4 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase CwlD5e-33140
NC_004557:2711702:272737227273722728097726Clostridium tetani E88, complete genomegermination-specific N-acetylmuramoyl-L-alanine amidase2e-32139
NC_016584:1583685:1586858158685815880421185Desulfosporosinus orientis DSM 765 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase3e-30132
NC_009698:3553365:355792635579263558630705Clostridium botulinum A str. Hall chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase1e-29130
NC_011837:238160:266596266596267321726Clostridium kluyveri NBRC 12016, complete genomehypothetical protein8e-30130
NC_009706:238160:266605266605267321717Clostridium kluyveri DSM 555 chromosome, complete genomegermination-specific N-acetylmuramoyl-L-alanine amidase8e-30130
NC_014328:4387303:442589644258964426588693Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase6e-30130
NC_009697:3659834:366081736608173661521705Clostridium botulinum A str. ATCC 19397 chromosome, completeN-acetylmuramoyl-L-alanine amidase2e-29129
NC_019978:686362:688393688393689076684Halobacteroides halobius DSM 5150, complete genomeN-acetylmuramoyl-L-alanine amidase3e-29128
NC_014829:178000:178742178742179461720Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase CwlD8e-28124
NC_014220:2239594:224053722405372241220684Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase CwlD4e-28124
NC_010723:223935:274089274089274751663Clostridium botulinum E3 str. Alaska E43, complete genomeN-acetylmuramoyl-L-alanine amidase CwlD4e-28124
NC_016048:2055199:206947120694712070196726Oscillibacter valericigenes Sjm18-20, complete genomeputative N-acetylmuramoyl-L-alanine amidase1e-26119
NC_011567:139598:140106140106140804699Anoxybacillus flavithermus WK1, complete genomeN-acetylmuramoyl-L-alanine amidase1e-24113
NC_014171:109280:147537147537148250714Bacillus thuringiensis BMB171 chromosome, complete genomespore-specific N-acetylmuramoyl-L-alanine amidase2e-23109
NC_017208:108134:149586149586150299714Bacillus thuringiensis serovar chinensis CT-43 chromosome, completespore-specific N-acetylmuramoyl-L-alanine amidase2e-23109
NC_018704:176088:179814179814180518705Amphibacillus xylanus NBRC 15112, complete genomegermination-specific N-acetylmuramoyl-L-alanine amidase2e-23109
NC_015565:287900:331818331818332537720Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completecell wall hydrolase/autolysin2e-22106
NC_010718:237962:241113241113241916804Natranaerobius thermophilus JW/NM-WN-LF, complete genomeN-acetylmuramoyl-L-alanine amidase2e-21102
NC_011898:851892:866523866523867272750Clostridium cellulolyticum H10, complete genomecell wall hydrolase/autolysin3e-21102
NC_014551:157418:157418157418158131714Bacillus amyloliquefaciens DSM 7, complete genomeN-acetylmuramoyl-L-alanine amidase4e-21101
NC_004193:205278:209362209362210093732Oceanobacillus iheyensis HTE831, complete genomegermination specific N-acetylmuramoyl-L-alanine amidase3e-2098.6
NC_014328:180482:1848201848201866311812Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative N-acetylmuramoyl-L-alanine amidase4e-2098.2
NC_007604:2213659:2213659221365922147081050Synechococcus elongatus PCC 7942, complete genomeCell wall hydrolase/autolysin3e-1892.4
NC_015520:3060495:306407430640743064778705Mahella australiensis 50-1 BON chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase3e-1892
NC_015555:2259500:2300952230095223023821431Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeN-acetylmuramoyl-L-alanine amidase5e-1891.3
NC_015589:1630461:163505816350581635783726Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase2e-1789.4
NC_016047:2480921:248393824839382484552615Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeN-acetylmuramoyl-L-alanine amidase8e-1787.4
NC_019970:2551607:2572748257274825741781431Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeN-acetylmuramoyl-L-alanine amidase1e-1687
NC_007644:1293701:131535413153541316082729Moorella thermoacetica ATCC 39073, complete genomeN-acetylmuramoyl-L-alanine amidase7e-1684.3
NC_009089:1202261:1214547121454712165862040Clostridium difficile 630, complete genomecell surface protein (putative N-acetylmuramoyl-L-alanine amidase)3e-1582
NC_013316:1081044:1093266109326610953052040Clostridium difficile R20291, complete genomecell surface protein (putative N-acetylmuramoyl-L-alanine amidase)4e-1581.6
NC_000964:3658000:3658149365814936596391491Bacillus subtilis subsp. subtilis str. 168, complete genomeN-acetylmuramoyl-L-alanine amidase (major autolysin) (CWBP49)8e-1580.5
NC_009089:1202261:1217070121707012191032034Clostridium difficile 630, complete genomecell surface protein (putative N-acetylmuramoyl-L-alanine amidase)4e-1478.2
NC_016627:2870900:2888618288861828896881071Clostridium clariflavum DSM 19732 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase4e-1478.2
NC_013316:1081044:1095797109579710978302034Clostridium difficile R20291, complete genomecell surface protein (putative N-acetylmuramoyl-L-alanine amidase)4e-1478.2
NC_015276:2804874:2819148281914828204761329Marinomonas mediterranea MMB-1 chromosome, complete genomecell wall hydrolase/autolysin7e-1477.8
NC_016077:998741:105235210523521053323972Acidaminococcus intestini RyC-MR95 chromosome, complete genometranscriptional regulator7e-1477.8
NC_009654:2958316:2979555297955529808831329Marinomonas sp. MWYL1, complete genomeN-acetylmuramoyl-L-alanine amidase1e-1376.6
NC_011726:3205278:3209074320907432108491776Cyanothece sp. PCC 8801, complete genomecell wall hydrolase/autolysin3e-1375.9
NC_004741:2526421:252642125264212527290870Shigella flexneri 2a str. 2457T, complete genomeN-acetylmuramoyl-l-alanine amidase I3e-1375.5
NC_004337:2548288:254828825482882549157870Shigella flexneri 2a str. 301, complete genomeN-acetylmuramoyl-l-alanine amidase I3e-1375.5
NC_013161:3071105:3087095308709530888701776Cyanothece sp. PCC 8802, complete genomecell wall hydrolase/autolysin3e-1375.5
NC_009922:315870:3336633336633350961434Alkaliphilus oremlandii OhILAs, complete genomeSpoIID/LytB domain8e-1373.9
NC_010723:3133302:3143492314349231457052214Clostridium botulinum E3 str. Alaska E43, complete genomesurface protein PspC3e-1272.4
NC_011297:1167615:1185899118589911875631665Dictyoglomus thermophilum H-6-12, complete genomecell wall hydrolase/autolysin3e-1272
NC_019908:1043401:104251710425171043449933Brachyspira pilosicoli P43/6/78 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase1e-1170.1
NC_016593:868500:8686788686788700241347Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeN-acetylmuramoyl-L-alanine amidase2e-1169.3
NC_016632:120500:1329301329301342761347Serratia symbiotica str. 'Cinara cedri' chromosome, completeN-acetylmuramoyl-l-alanine amidase II2e-1169.3
NC_015966:2337833:2358239235823923594591221Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomecell wall hydrolase/autolysin4e-1168.2
NC_003901:2727361:2729681272968127310541374Methanosarcina mazei Go1, complete genomecell surface protein6e-1167.8
NC_001263:1378605:1392928139292813940431116Deinococcus radiodurans R1 chromosome 1, complete sequenceN-acetylmuramoyl-L-alanine amidase, putative9e-1167.4
NC_010424:1563033:1592155159215515944102256Candidatus Desulforudis audaxviator MP104C, complete genomeN-acetylmuramoyl-L-alanine amidase2e-1066.2
NC_008148:2290806:2308321230832123093971077Rubrobacter xylanophilus DSM 9941, complete genomecell wall hydrolase/autolysin2e-1066.2
NC_004342:3370310:3393746339374633948371092Leptospira interrogans serovar Lai str. 56601 chromosome I,N-acetylmuramoyl-L-alanine amidase5e-1064.7
NC_009328:2905000:292383329238332924537705Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase7e-1064.3
NC_014328:4249032:426661242666124267328717Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase8e-1063.9
NC_007298:3271071:3293633329363332949821350Dechloromonas aromatica RCB, complete genomeCell wall hydrolase/autolysin1e-0963.5
NC_010001:3421710:344030134403013440876576Clostridium phytofermentans ISDg, complete genomecell wall hydrolase/autolysin2e-0962.4
NC_015144:1526669:1526669152666915279791311Weeksella virosa DSM 16922 chromosome, complete genomecell wall hydrolase/autolysin3e-0962.4
NC_016751:1623756:1642310164231016436831374Marinitoga piezophila KA3 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase4e-0961.6
NC_018664:1573925:158825715882571589231975Clostridium acidurici 9a chromosome, complete genomeputative cell wall amidase LytH8e-0960.8
NC_014973:1941500:1960295196029519615721278Geobacter sp. M18 chromosome, complete genomecell wall hydrolase/autolysin1e-0860.1
NC_018515:3411276:341942134194213420176756Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase4e-0858.5
NC_014652:801653:831651831651832199549Caldicellulosiruptor hydrothermalis 108 chromosome, completecell wall hydrolase/autolysin5e-0858.2
NC_015519:2489728:250441425044142505076663Tepidanaerobacter sp. Re1 chromosome, complete genomecell wall hydrolase/autolysin5e-0858.2
NC_012925:1125876:1145568114556811486753108Streptococcus suis P1/7, complete genomeN-acetylmuramoyl-L-alanine amidase1e-0756.6
NC_013411:597235:632480632480633163684Geobacillus sp. Y412MC61, complete genomecell wall hydrolase/autolysin1e-0756.6
NC_009442:1216355:1234262123426212373693108Streptococcus suis 05ZYH33 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase1e-0756.6
NC_013921:1396500:140293514029351403645711Thermoanaerobacter italicus Ab9 chromosome, complete genomecell wall hydrolase/autolysin1e-0756.6
NC_014915:2963500:297077229707722971452681Geobacillus sp. Y412MC52 chromosome, complete genomecell wall hydrolase/autolysin2e-0756.2
NC_012926:727716:7307667307667335732808Streptococcus suis BM407 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase2e-0756.2
NC_010723:3133302:3141134314113431431912058Clostridium botulinum E3 str. Alaska E43, complete genomesurface protein PspC3e-0755.5
NC_016048:1438721:147035414703541470926573Oscillibacter valericigenes Sjm18-20, complete genomeputative N-acetylmuramoyl-L-alanine amidase3e-0755.5
NC_021184:4493440:451665445166544517340687Desulfotomaculum gibsoniae DSM 7213, complete genomeN-acetylmuramoyl-L-alanine amidase8e-0754.3
NC_018515:4660808:466437946643794665224846Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase1e-0653.1
NC_015977:2631789:2648850264885026542105361Roseburia hominis A2-183 chromosome, complete genomeN-acetylmuramidase/lysin2e-0653.1
NC_014376:1472304:152044715204471521025579Clostridium saccharolyticum WM1 chromosome, complete genomecell wall hydrolase/autolysin3e-0652