Pre_GI: BLASTP Hits

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Query: NC_009664:3718927:3736281 Kineococcus radiotolerans SRS30216, complete genome

Start: 3736281, End: 3736940, Length: 660

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015671:1540860:155556815555681556215648Cellvibrio gilvus ATCC 13127 chromosome, complete genomeCytochrome-c oxidase7e-77286
NC_013169:1661135:166443316644331665086654Kytococcus sedentarius DSM 20547, complete genomeheme/copper-type cytochrome/quinol oxidase, subunit 32e-76285
NC_015588:1965787:197156319715631972165603Isoptericola variabilis 225 chromosome, complete genomeCytochrome-c oxidase2e-75282
NC_010617:1428902:143564914356491436287639Kocuria rhizophila DC2201, complete genomecytochrome c oxidase subunit III2e-75281
NC_015514:2414617:242209724220972422723627Cellulomonas fimi ATCC 484 chromosome, complete genomecytochrome-c oxidase2e-75281
NC_012803:1302261:130652713065271307165639Micrococcus luteus NCTC 2665, complete genomeheme/copper-type cytochrome/quinol oxidase, subunit 39e-75279
NC_014151:2312000:231790123179012318548648Cellulomonas flavigena DSM 20109 chromosome, complete genomeCytochrome-c oxidase2e-72271
NC_003888:2305901:231362323136232314243621Streptomyces coelicolor A3(2), complete genomecytochrome c oxidase subunit III2e-69261
NC_018750:2005229:201485620148562015476621Streptomyces venezuelae ATCC 10712, complete genomeCytochrome c oxidase polypeptide III4e-69260
NC_010572:6293417:630507263050726305692621Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative cytochrome c oxidase subunit III5e-68257
NC_021177:1922930:193240019324001933020621Streptomyces fulvissimus DSM 40593, complete genomeCytochrome c oxidase subunit III1e-67256
NC_014643:2056280:215095921509592151516558Rothia dentocariosa ATCC 17931 chromosome, complete genomecytochrome c oxidase subunit III1e-67255
NC_015953:1756493:176297917629791763599621Streptomyces sp. SirexAA-E chromosome, complete genomeCytochrome-c oxidase2e-67255
NC_014210:3742112:375285837528583753484627Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,Cytochrome-c oxidase2e-61234
NC_019673:1656680:167746916774691678077609Saccharothrix espanaensis DSM 44229 complete genomeputative cytochrome c oxidase subunit 32e-55215
NC_009338:2925286:296654129665412967134594Mycobacterium gilvum PYR-GCK chromosome, complete genomecytochrome c oxidase subunit III2e-53208
NC_004369:2203947:221417622141762214829654Corynebacterium efficiens YS-314, complete genomeputative cytochrome c oxidase subunit III1e-48192
NC_016802:1615748:162572816257281626318591Corynebacterium diphtheriae HC02 chromosome, complete genomecytochrome C oxidase subunit III6e-48190
NC_011884:1029328:104920810492081049834627Cyanothece sp. PCC 7425, complete genomecytochrome c oxidase subunit III3e-26118
NC_015723:1047418:105053310505331051189657Cupriavidus necator N-1 chromosome 2, complete sequencecytochrome o ubiquinol oxidase subunit1e-1893.2
NC_009523:2769154:279269627926962793304609Roseiflexus sp. RS-1 chromosome, complete genomecytochrome c oxidase subunit III5e-1891.3
NC_017190:1465079:152565915256591526282624Bacillus amyloliquefaciens LL3 chromosome, complete genomecytochrome caa3 oxidase (subunit III)3e-1788.6
NC_014910:2045088:206447120644712065103633Alicycliphilus denitrificans BC chromosome, complete genomecytochrome o ubiquinol oxidase, subunit iii2e-1685.9
NC_015422:2326942:234783423478342348466633Alicycliphilus denitrificans K601 chromosome, complete genomecytochrome o ubiquinol oxidase subunit III2e-1685.9
NC_009465:29735:378063780638690885Candidatus Vesicomyosocius okutanii HA, complete genomecytochrome c oxidase subunit III2e-1685.5
NC_010547:31444:515715157152185615Cyanothece sp. ATCC 51142 chromosome linear, complete sequencecytochrome c oxidase subunit III2e-1685.5
NC_020164:1784223:180459018045901805195606Staphylococcus warneri SG1, complete genomeputative quinol oxidase polypeptide III1e-1583.2
NC_015663:2694373:272570627257062726317612Enterobacter aerogenes KCTC 2190 chromosome, complete genomecytochrome o ubiquinol oxidase subunit III1e-1583.2
NC_007508:1446526:146733514673351467961627Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomecytochrome O ubiquinol oxidase subunit III1e-1582.8
NC_015731:402280:414138414138414995858Nitrosomonas sp. Is79A3 chromosome, complete genomecytochrome c oxidase subunit III2e-1582.8
NC_010943:1379707:139674013967401397378639Stenotrophomonas maltophilia K279a, complete genomeputative quinol oxidase subunit 33e-1581.6
NC_015497:3614817:362317336231733623820648Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomecytochrome o ubiquinol oxidase, subunit III8e-1580.5
NC_020181:2714559:271952727195272720402876Enterobacter aerogenes EA1509E, complete genomeCytochrome O ubiquinol oxidase subunit III1e-1480.1
NC_004741:366822:380831380831381445615Shigella flexneri 2a str. 2457T, complete genomecytochrome o ubiquinol oxidase subunit III9e-1580.1
NC_004337:367687:381698381698382312615Shigella flexneri 2a str. 301, complete genomecytochrome o ubiquinol oxidase subunit III9e-1580.1
NC_008258:401786:419349419349419963615Shigella flexneri 5 str. 8401, complete genomecytochrome o ubiquinol oxidase subunit III9e-1580.1
NC_017328:385552:399562399562400176615Shigella flexneri 2002017 chromosome, complete genomeCytochrome o ubiquinol oxidase subunit 39e-1580.1
NC_009654:91096:102866102866103477612Marinomonas sp. MWYL1, complete genomecytochrome o ubiquinol oxidase subunit III2e-1479.3
NC_008312:409830:427229427229427843615Trichodesmium erythraeum IMS101, complete genomecytochrome c oxidase, subunit III7e-1477.4
NC_013205:526281:570422570422571030609Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,cytochrome c oxidase subunit III7e-1477.4
NC_004461:746284:745689745689746294606Staphylococcus epidermidis ATCC 12228, complete genomequinol oxidase polypeptide III QoxC1e-1376.6
NC_002976:638799:638204638204638809606Staphylococcus epidermidis RP62A, complete genomequinol oxidase, subunit III1e-1376.6
NC_002977:925588:929111929111929977867Methylococcus capsulatus str. Bath, complete genomecytochrome c oxidase, subunit III1e-1376.3
NC_015379:89441:112405112405113292888Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative cytochrome-c oxidase, subunit III3e-1375.1
NC_013743:1937125:195589419558941956853960Haloterrigena turkmenica DSM 5511, complete genomeCytochrome-c oxidase3e-1375.1
NC_002528:505951:514189514189514806618Buchnera aphidicola str. APS (Acyrthosiphon pisum), completecytochrome O ubiquinol oxidase subunit III4e-1375.1
NC_017253:509494:515090515090515737648Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) chromosome,cytochrome O ubiquinol oxidase subunit III4e-1375.1
NC_016830:81382:978949789498781888Pseudomonas fluorescens F113 chromosome, complete genomeprotein CoIII6e-1374.3
NC_017256:515579:514965514965515582618Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) chromosome,cytochrome O ubiquinol oxidase subunit III1e-1273.6
NC_007435:2701242:273162427316242732253630Burkholderia pseudomallei 1710b chromosome II, complete sequencecytochrome c oxidase, subunit III family protein1e-1273.2
NC_009078:862796:893230893230893859630Burkholderia pseudomallei 1106a chromosome II, complete sequencecytochrome c oxidase, subunit III1e-1273.2
NC_006351:881655:912150912150912743594Burkholderia pseudomallei K96243 chromosome 2, complete sequencecytochrome c oxidase subunit III protein2e-1272.8
NC_004757:1089057:110039011003901101235846Nitrosomonas europaea ATCC 19718, complete genomeCytochrome c oxidase, subunit III2e-1272.8
NC_009338:4869700:486970048697004870302603Mycobacterium gilvum PYR-GCK chromosome, complete genomecytochrome c oxidase subunit III2e-1272.4
NC_020300:131782:146048146048146713666Bartonella australis Aust/NH1, complete genomecytochrome o ubiquinol oxidase subunit III2e-1272.4
NC_014012:207289:223195223195224070876Shewanella violacea DSS12, complete genomecytochrome c oxidase subunit III3e-1272
NC_009075:937782:967361967361967990630Burkholderia pseudomallei 668 chromosome II, complete sequencecytochrome c oxidase, subunit III3e-1271.6
NC_014831:1906691:192768319276831928249567Thermaerobacter marianensis DSM 12885 chromosome, complete genomecytochrome c oxidase subunit III5e-1271.2
NC_008595:1911491:192615519261551926667513Mycobacterium avium 104, complete genomecytochrome c oxidase, subunit III family protein5e-1271.2
NC_005956:152497:166493166493167158666Bartonella henselae str. Houston-1, complete genomeCytochrome o ubiquinol oxidase subunit III7e-1270.9
NC_013894:1380564:140442814044281405219792Thermocrinis albus DSM 14484 chromosome, complete genomecytochrome c oxidase subunit III7e-1270.9
NC_007484:3429140:343917034391703440036867Nitrosococcus oceani ATCC 19707, complete genomeCytochrome c oxidase, subunit III6e-1270.9
NC_005955:139907:153917153917154582666Bartonella quintana str. Toulouse, complete genomeCytochrome o ubiquinol oxidase subunit III1e-1169.7
NC_012779:2127542:213849821384982139115618Edwardsiella ictaluri 93-146, complete genomecytochrome o ubiquinol oxidase, subunit III, putative1e-1169.7
NC_014315:3278386:328544432854443286310867Nitrosococcus watsoni C-113 chromosome, complete genomecytochrome c oxidase2e-1169.3
NC_004129:5781413:579255157925515793177627Pseudomonas fluorescens Pf-5, complete genomecytochrome o ubiquinol oxidase, subunit III2e-1169.3
NC_010175:2925084:292781929278192928607789Chloroflexus aurantiacus J-10-fl, complete genomecytochrome c oxidase subunit III2e-1168.9
NC_006396:2057209:2057209205720920597732565Haloarcula marismortui ATCC 43049 chromosome I, complete sequencecytochrome c oxidase subunit I1e-1066.6
NC_017259:480656:493088493088493708621Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,cytochrome O ubiquinol oxidase subunit III1e-1066.2
NC_013959:1059004:110630211063021106889588Sideroxydans lithotrophicus ES-1 chromosome, complete genomecytochrome c oxidase subunit III2e-1066.2
NC_010511:4313769:434165843416584342380723Methylobacterium sp. 4-46 chromosome, complete genomecytochrome c oxidase subunit III3e-1065.5
NC_007940:1178000:119354811935481194381834Rickettsia bellii RML369-C, complete genomeCytochrome c oxidase subunit III3e-1065.5
NC_009883:343067:347761347761348594834Rickettsia bellii OSU 85-389, complete genomeCytochrome c oxidase subunit III4e-1065.1
NC_015656:1653450:166373216637321664352621Frankia symbiont of Datisca glomerata chromosome, complete genomecytochrome c oxidase subunit III4e-1064.7
NC_015675:4493758:449623544962354496921687Mesorhizobium opportunistum WSM2075 chromosome, complete genomecytochrome c oxidase subunit III9e-1063.5
NC_016626:1592781:161178616117861612400615Burkholderia sp. YI23 plasmid byi_1p, complete sequencecytochrome c oxidase subunit III2e-0962.4
NC_013730:6901725:691454369145436915340798Spirosoma linguale DSM 74, complete genomecytochrome c oxidase subunit III5e-0961.2
NC_006370:166000:174467174467175384918Photobacterium profundum SS9 chromosome 1, complete sequenceputative cytochrome c oxidase subunit III9e-0960.5
NC_019962:2189432:218943221894322190331900Natrinema pellirubrum DSM 15624, complete genomeheme/copper-type cytochrome/quinol oxidase, subunit 39e-0960.5
NC_013532:85371:966109661097428819Anaplasma centrale str. Israel, complete genomecytochrome c oxidase subunit III1e-0860.1
NC_020054:1335699:134975213497521350537786Fibrella aestuarina BUZ 2 drat genomecytochrome c oxidase subunit III1e-0860.1
NC_013730:6901725:691393769139376914527591Spirosoma linguale DSM 74, complete genomecytochrome c oxidase subunit III2e-0859.7
NC_013009:608515:611065611065611886822Neorickettsia risticii str. Illinois, complete genomecytochrome c oxidase subunit III3e-0858.9
NC_016929:197403:197403197403198254852Rickettsia canadensis str. CA410 chromosome, complete genomecytochrome c oxidase subunit III4e-0858.5
NC_018677:111500:145982145982146527546Candidatus Portiera aleyrodidarum BT-B-HRs chromosome, completeCytochrome O ubiquinol oxidase subunit III3e-0858.5
NC_015387:1965711:197311319731131973781669Marinithermus hydrothermalis DSM 14884 chromosome, complete genomecytochrome c oxidase subunit III3e-0858.5
NC_004061:498483:515322515322515891570Buchnera aphidicola str. Sg (Schizaphis graminum), complete genomecytochrome O ubiquinol oxidase C3e-0858.5
NC_004842:1132441:114625811462581147076819Anaplasma marginale str. St. Maries, complete genomecytochrome C oxidase subunit III4e-0858.2
NC_012026:1135041:115046211504621151280819Anaplasma marginale str. Florida, complete genomecytochrome C oxidase, subunit III (coxC)4e-0858.2
NC_015656:3200500:320820632082063208805600Frankia symbiont of Datisca glomerata chromosome, complete genomecytochrome c oxidase subunit III5e-0857.8
NC_006833:902744:906600906600907418819Wolbachia endosymbiont strain TRS of Brugia malayi, completeCytochrome c oxidase, subunit 37e-0857.4
NC_007798:586500:593233593233594057825Neorickettsia sennetsu str. Miyayama, complete genomecytochrome c oxidase, subunit III7e-0857.4
NC_017278:48630:5324753247556222376Thermus sp. CCB_US3_UF1 chromosome, complete genomeCytochrome c oxidase polypeptide I+III1e-0757
NC_009488:1430693:145809414580941458918825Orientia tsutsugamushi str. Boryong, complete genomecytochrome c oxidase subunit III1e-0756.6
NC_015703:3444025:345688334568833457644762Runella slithyformis DSM 19594 chromosome, complete genomecytochrome c oxidase subunit III2e-0755.8
NC_018645:1798874:180054318005431801139597Desulfobacula toluolica Tol2, complete genomecytochrome c oxidase subunit III CtaE2e-0755.8
NC_007484:1355880:136609513660951366739645Nitrosococcus oceani ATCC 19707, complete genomecytochrome/quinol oxidase subunit 36e-0754.3
NC_007947:1556437:155643715564371557048612Methylobacillus flagellatus KT, complete genomecytochrome c oxidase, subunit III7e-0754.3
NC_013922:230842:2565412565412590242484Natrialba magadii ATCC 43099 chromosome, complete genomecytochrome c oxidase subunit I9e-0753.5
NC_019964:1961237:1975947197594719786402694Halovivax ruber XH-70, complete genomeheme/copper-type cytochrome/quinol oxidase, subunit 11e-0653.5
NC_015703:3444025:345625434562543456838585Runella slithyformis DSM 19594 chromosome, complete genomecytochrome c oxidase subunit III2e-0652.8
NC_007404:2048000:206132620613262061931606Thiobacillus denitrificans ATCC 25259, complete genomeputative denitrification protein NorE2e-0652.4
NC_020054:1335699:134914313491431349736594Fibrella aestuarina BUZ 2 drat genomecytochrome c oxidase subunit III3e-0652
NC_015914:2658845:267263626726362673406771Cyclobacterium marinum DSM 745 chromosome, complete genomecytochrome c oxidase subunit III4e-0651.6
NC_015914:2658845:267203226720322672613582Cyclobacterium marinum DSM 745 chromosome, complete genomecytochrome c oxidase subunit III5e-0651.2
NC_015387:1965711:1970351197035119727352385Marinithermus hydrothermalis DSM 14884 chromosome, complete genomecytochrome c oxidase, subunit I8e-0650.4