Pre_GI Gene

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Host: NC_008312 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008312:409830 Trichodesmium erythraeum IMS101, complete genome

Host Lineage: Trichodesmium erythraeum; Trichodesmium; ; Oscillatoriales; Cyanobacteria; Bacteria

General Information: Trichodesmium erythraeum strain IMS101 was isolated from the North Carolina coast in 1992 and grows in straight filaments. Filamentous marine cyanobacterium. This filamentous marine cyanobacterium is a nitrogen-fixing organism that contribues a significant amount of the global fixed nitrogen each year. These bacteria are unusual in that nitrogen fixation takes place in a differentiated cell called the diazocyte which is different from the nitrogen-fixing differentiated cell (heterocyst) found in other cyanobacteria. The diazocyte is developed in order to protect the oxygen-sensitive nitrogenases and includes a number of changes including production of more membranes and down-regulation of photosynthetic activity during times of peak nitrogen fixation (noontime). This organism gives the Red Sea its name when large blooms appear and is one of the organisms most often associated with large blooms in marine waters.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
409830410546717ribosomal protein L1QuickGO ontologyBLASTP
410674411099426ribosomal protein L11QuickGO ontologyBLASTP
411099411773675NusG antitermination factorQuickGO ontologyBLASTP
411770411994225preprotein translocase SecE subunitQuickGO ontologyBLASTP
41229641236873tRNA-TrpQuickGO ontology
412469412852384ribosomal protein L19QuickGO ontologyBLASTP
4134074151581752protein of unknown function DUF6 transmembraneQuickGO ontology
4159374176221686chaperonin GroELQuickGO ontologyBLASTP
4178494209503102pentapeptide repeatQuickGO ontologyBLASTP
4223714235881218major facilitator superfamily MFS_1QuickGO ontologyBLASTP
423919424896978sulfotransferaseQuickGO ontologyBLASTP
4251784266981521glucose-methanol-choline oxidoreductaseQuickGO ontologyBLASTP
427229427843615cytochrome c oxidase subunit IIIQuickGO ontologyBLASTP
4282934299811689Cytochrome-c oxidaseQuickGO ontologyBLASTP
430086430994909cytochrome c oxidase subunit IIQuickGO ontologyBLASTP
431013431618606hypothetical proteinBLASTP
431615432115501hypothetical proteinBLASTP