Pre_GI: BLASTP Hits

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Query: NC_009438:236424:236424 Shewanella putrefaciens CN-32 chromosome, complete genome

Start: 236424, End: 237026, Length: 603

Host Lineage: Shewanella putrefaciens; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella putrefaciens is a Gram-negative bacterium. It has been isolated from marine environments, as well as from anaerobic sandstone in the Morrison formation in New Mexico, USA. S. putrefaciens is also a facultative anaerobe with the ability to reduce iron and manganese metabolically; that is, it can use iron and manganese as the terminal electron acceptor in the electron transport chain (in contrast to obligate aerobes which must use oxygen for this purpose). It is also one of the organisms associated with the odor of rotting fish, as it is a marine organism which produces trimethylamines (hence the species name putrefaciens, from putrid). This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This species, along with Shewanella algae, are the only Shewanella spp. to be found in clinical speciments. Normally found in marine environments in warmer temperatures, infections seem to occur more frequently in countries with a warm climate and in other countries during warm summer months.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009778:1222273:123099312309931231595603Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein8e-108389
NC_016816:4129299:415125441512544151856603Pantoea ananatis LMG 5342, complete genomesite-specific recombinase, phage integrase family1e-106385
NC_013956:1762171:179168017916801792282603Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein5e-106383
NC_017047:2042346:206242220624222063024603Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein6e-103372
NC_011751:3048490:307718430771843077864681Escherichia coli UMN026 chromosome, complete genomesite-specific recombinase, phage integrase family1e-101368
NC_017047:2957957:296663329666332967157525Rahnella aquatilis HX2 chromosome, complete genomeintegrase5e-84310
NC_009434:3611738:368162936816293682249621Pseudomonas stutzeri A1501, complete genomephage integrase family site specific recombinase2e-70264
NC_012792:962292:971437971437972060624Variovorax paradoxus S110 chromosome 2, complete genomeintegrase family protein4e-70263
NC_020209:47504:604376043761057621Pseudomonas poae RE*1-1-14, complete genomesite-specific recombinase XerC2e-69261
NC_020209:47504:858688586886488621Pseudomonas poae RE*1-1-14, complete genomesite-specific recombinase XerC3e-69261
NC_014153:2077647:208438620843862085012627Thiomonas intermedia K12 chromosome, complete genomeintegrase family protein5e-69260
NC_013446:2164974:218941721894172190040624Comamonas testosteroni CNB-2, complete genomephage integrase7e-69259
NC_014539:743523:750816750816751442627Burkholderia sp. CCGE1003 chromosome 1, complete sequenceintegrase family protein8e-69259
NC_015572:2186394:220779522077952208418624Methylomonas methanica MC09 chromosome, complete genomeintegrase family protein1e-68258
NC_015942:355944:362190362190362819630Acidithiobacillus ferrivorans SS3 chromosome, complete genomeintegrase family protein1e-68259
NC_014394:1626699:163772816377281638342615Gallionella capsiferriformans ES-2 chromosome, complete genomeintegrase family protein2e-68258
NC_017075:1970168:197925419792541979877624Rubrivivax gelatinosus IL144, complete genomephage integrase family protein2e-68258
NC_010170:4739925:475923847592384759852615Bordetella petrii, complete genomehypothetical protein7e-68256
NC_007336:66000:825458254583171627Ralstonia eutropha JMP134 megaplasmid, complete sequencePhage integrase8e-68256
NC_020829:940692:982480982480983100621Pseudomonas denitrificans ATCC 13867, complete genomesite-specific recombinase XerC4e-67254
NC_014910:2779573:278745227874522788075624Alicycliphilus denitrificans BC chromosome, complete genomeintegrase family protein4e-67254
NC_015563:4093650:410572541057254106348624Delftia sp. Cs1-4 chromosome, complete genomeintegrase family protein6e-66249
NC_016002:2946702:296022929602292960843615Pseudogulbenkiania sp. NH8B, complete genomephage integrase family protein2e-65248
NC_010511:871905:881963881963882592630Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein1e-64245
NC_017506:4380196:440114444011444401758615Marinobacter adhaerens HP15 chromosome, complete genomephage integrase family protein1e-64245
NC_008740:3520500:355204135520413552655615Marinobacter aquaeolei VT8, complete genomephage integrase family protein5e-64243
NC_008702:2520500:252684025268402527454615Azoarcus sp. BH72, complete genomeputative Tyrosine recombinase xerD6e-63239
NC_011757:3540992:354603435460343546663630Methylobacterium chloromethanicum CM4, complete genomeintegrase family protein7e-62236
NC_012988:769981:823391823391824020630Methylobacterium extorquens DM4, complete genomeDNA integration/recombination/inversion protein, site-specific recombinase, phage integrase family1e-60232
NC_010172:798923:848604848604849233630Methylobacterium extorquens PA1, complete genomeintegrase family protein2e-60231
NC_008043:86470:913399133991971633Silicibacter sp. TM1040 mega plasmid, complete sequencephage integrase3e-60231
NC_009512:2238437:224339322433932244109717Pseudomonas putida F1, complete genomephage integrase family protein3e-60231
NC_011757:5048714:507994450799445080573630Methylobacterium chloromethanicum CM4, complete genomeintegrase family protein8e-60229
NC_009952:2752500:275627227562722756904633Dinoroseobacter shibae DFL 12, complete genomehypothetical protein2e-59228
NC_011004:4073916:410016341001634100795633Rhodopseudomonas palustris TIE-1, complete genomeintegrase family protein3e-58224
NC_007722:851129:863700863700864338639Erythrobacter litoralis HTCC2594, complete genomephage integrase family protein3e-54211
NC_010510:339879:352204352204352836633Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeintegrase family protein5e-53206
NC_010510:339879:339879339879340511633Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeintegrase family protein1e-52206
NC_014258:42262:537175371754085369Pantoea vagans C9-1 plasmid pPag3, complete sequencehypothetical protein5e-50197
NC_020260:2725201:273642827364282736793366Cronobacter sakazakii Sp291, complete genomehypothetical protein2e-45182
NC_009092:261778:270161270161270757597Shewanella loihica PV-4, complete genomephage integrase family protein2e-44178
NC_014012:3812754:382801038280103828606597Shewanella violacea DSS12, complete genomesite-specific recombinase, phage integrase family9e-43173
NC_008314:477722:499873499873500256384Ralstonia eutropha H16 chromosome 2, complete sequencefragmented site-specific recombinase XerC/XerD2e-36152
NC_017075:1869326:189689218968921897272381Rubrivivax gelatinosus IL144, complete genomephage integrase family protein2e-36152
NC_016626:1699500:172012117201211720462342Burkholderia sp. YI23 plasmid byi_1p, complete sequenceintegrase family protein4e-34144
NC_014500:894136:904367904367904684318Dickeya dadantii 3937 chromosome, complete genomeputative recombinase4e-33140
NC_007404:387827:395122395122395433312Thiobacillus denitrificans ATCC 25259, complete genomehypothetical protein6e-27120
NC_008314:477722:505403505403505858456Ralstonia eutropha H16 chromosome 2, complete sequencetruncated site-specific recombinase9e-25113
NC_004460:708416:725319725319725558240Vibrio vulnificus CMCP6 chromosome II, complete sequenceIntegrase3e-1788.6
NC_010511:871905:876911876911877126216Methylobacterium sp. 4-46 chromosome, complete genome5e-1787.4
NC_020409:1173796:118265711826571183256600Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeIntegrase family protein2e-1272.4
NC_013508:1491945:150146015014601501594135Edwardsiella tarda EIB202, complete genomehypothetical protein2e-1272
NC_016803:3502749:352127235212723521871600Desulfovibrio desulfuricans ND132 chromosome, complete genomeintegrase family protein7e-1270.5
NC_008314:477722:505224505224505406183Ralstonia eutropha H16 chromosome 2, complete sequenceTruncated9e-1270.1
NC_011883:2680380:269246126924612693054594Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,integrase family protein1e-1169.3
NC_011883:2680380:270035627003562700949594Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,integrase family protein1e-1169.3
NC_014844:511552:517143517143517697555Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeintegrase family protein1e-1169.7
NC_010625:1602191:162214016221401622406267Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencehypothetical protein5e-1167.8
NC_003485:296140:308140308140308715576Streptococcus pyogenes MGAS8232, complete genomehypothetical protein5e-1167.8
NC_004070:747146:762960762960763535576Streptococcus pyogenes MGAS315, complete genomeputative recombinase - phage associated5e-1167.4
NC_004606:1107500:113322111332211133796576Streptococcus pyogenes SSI-1, complete genomeputative integrase/recombinase, XerC/XerD family5e-1167.4
NC_012108:2159230:216676321667632167356594Desulfobacterium autotrophicum HRM2, complete genomesite-specific recombinase/integrase XerD2e-1065.5
NC_010511:4696868:474309747430974743288192Methylobacterium sp. 4-46 chromosome, complete genome3e-1065.1
NC_014916:22644:437804378044349570Geobacillus sp. Y412MC52 plasmid pGYMC5201, complete sequenceintegrase family protein4e-1064.7
NC_012796:77071:953999539995956558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase5e-1064.3
NC_013766:679906:692805692805693347543Listeria monocytogenes 08-5578 chromosome, complete genomeprophage LambdaSa2, site-specific recombinase, phage integrase family5e-1064.3
NC_012563:1681639:170013117001311700736606Clostridium botulinum A2 str. Kyoto, complete genomephage integrase family protein8e-1063.5
NC_012796:3600630:364833536483353648892558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase1e-0963.2
NC_020207:1614000:162429216242921624864573Enterococcus faecium NRRL B-2354, complete genomesite-specific recombinase1e-0963.2
NC_020272:1311932:133478513347851335327543Bacillus amyloliquefaciens IT-45, complete genomesite-specific tyrosine recombinase2e-0962.4
UCMB5137:1522159:153330715333071533849543Bacillus atrophaeus UCMB-5137site-specific recombinase, phage integrase family protein2e-0962.4
NC_012796:4075583:416552141655214166078558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase3e-0961.6
NC_012796:3600630:362703436270343627591558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase3e-0961.6
NC_015875:34270:484594845949001543Streptococcus pseudopneumoniae IS7493 chromosome, complete genomeprophage LambdaSa2, site-specific recombinase phage integrase family protein4e-0961.2
NC_012796:3374911:342491734249173425474558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase5e-0960.8
NC_012925:1357783:136497613649761365518543Streptococcus suis P1/7, complete genomephage integrase family protein8e-0960.1
NC_012924:1446190:145338314533831453925543Streptococcus suis SC84, complete genomephage integrase family protein8e-0960.1
NC_012926:1496510:150370315037031504245543Streptococcus suis BM407 chromosome, complete genomephage integrase family protein8e-0960.1
NC_004116:1827351:185300518530051853547543Streptococcus agalactiae 2603V/R, complete genomeprophage LambdaSa2, site-specific recombinase, phage integrase family8e-0960.5
NC_009443:1445936:145312714531271453699573Streptococcus suis 98HAH33, complete genomeprophage LambdaSa2, site-specific recombinase phage integrase family protein9e-0960.1
NC_009442:1446508:145370114537011454273573Streptococcus suis 05ZYH33 chromosome, complete genomeprophage LambdaSa2, site-specific recombinase phage integrase family protein9e-0960.1
NC_012796:1049034:113043711304371130994558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase1e-0859.7
NC_015711:8964410:897108589710858971699615Myxococcus fulvus HW-1 chromosome, complete genomephage integrase family site specific recombinase1e-0859.7
NC_012796:3600630:361445136144513615008558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase1e-0859.7
NC_012796:985000:998898998898999455558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase1e-0860.1
NC_012796:1645856:166448516644851665042558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase2e-0858.9
NC_014623:3199248:321248432124843213164681Stigmatella aurantiaca DW4/3-1 chromosome, complete genomesite-specific recombinase, phage integrase family2e-0858.9
NC_016052:2335648:234426723442672344818552Tetragenococcus halophilus NBRC 12172, complete genomeputative site-specific recombinase3e-0858.5
UCMB5137:1522159:153732315373231537868546Bacillus atrophaeus UCMB-5137putative bacteriophage integrase3e-0858.5
NC_020291:1122282:112310111231011123706606Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomephage integrase family protein5e-0857.8
NC_012796:77071:114358114358114915558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase6e-0857.4
NC_014623:3097675:311076631107663111380615Stigmatella aurantiaca DW4/3-1 chromosome, complete genomesite-specific recombinase, phage integrase family7e-0857
NC_014650:603500:628630628630629172543Geobacillus sp. Y4.1MC1 chromosome, complete genomeintegrase9e-0857
NC_013891:1639694:165579916557991656341543Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomesite-specific recombinase, phage integrase family1e-0756.6
NC_007907:960104:101699610169961017559564Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-0755.8
NC_009617:1085000:108757010875701088175606Clostridium beijerinckii NCIMB 8052 chromosome, complete genomephage integrase family protein2e-0755.5
NC_009697:3110772:312844431284443128989546Clostridium botulinum A str. ATCC 19397 chromosome, completephage integrase family site specific recombinase3e-0754.7
NC_010516:2676746:269860026986002699145546Clostridium botulinum B1 str. Okra, complete genomesite-specific recombinase, phage integrase family3e-0755.1
NC_020134:1941523:195526219552621955822561Clostridium stercorarium subsp. stercorarium DSM 8532, completeintegrase family protein6e-0754.3
NC_012796:1049034:109984510998451100402558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase6e-0753.9
NC_012796:1049034:106572110657211066278558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase1e-0652.8
NC_016894:3580274:358909935890993589713615Acetobacterium woodii DSM 1030 chromosome, complete genomehypothetical protein2e-0652
NC_008321:1993541:200790620079062008544639Shewanella sp. MR-4, complete genomephage integrase family protein2e-0652.4
NC_009092:1441813:145236114523611452921561Shewanella loihica PV-4, complete genomephage integrase family protein2e-0652.4
NC_009901:1516340:152799315279931528553561Shewanella pealeana ATCC 700345, complete genomeintegrase family protein2e-0652.4
NC_009012:2706755:272158027215802722146567Clostridium thermocellum ATCC 27405, complete genomephage integrase2e-0652.8
NC_008261:1787345:180851718085171809065549Clostridium perfringens ATCC 13124, complete genomesite-specific recombinase, phage integrase family4e-0651.2
NC_021184:3533500:354809635480963548656561Desulfotomaculum gibsoniae DSM 7213, complete genomesite-specific recombinase XerD5e-0651.2
NC_010674:950276:951654951654952292639Clostridium botulinum B str. Eklund 17B, complete genomesite-specific recombinase6e-0650.8
NC_013791:875224:8922118922118932571047Bacillus pseudofirmus OF4 chromosome, complete genomehypothetical protein6e-0650.8
NC_014376:3009403:3032351303235130335741224Clostridium saccharolyticum WM1 chromosome, complete genomeintegrase family protein7e-0650.4
NC_016894:3988180:399539039953903996004615Acetobacterium woodii DSM 1030 chromosome, complete genomeprophage LambdaBa04 site-specific recombinase phage integrase family9e-0650.1