Pre_GI: BLASTP Hits

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Query: NC_009434:3611738:3625281 Pseudomonas stutzeri A1501, complete genome

Start: 3625281, End: 3626291, Length: 1011

Host Lineage: Pseudomonas stutzeri; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain (A1501; CGMCC 0351) was isolated from rice roots that had been inoculated with strain A15 in a rice paddy in China. It is considered wild-type and has been studied for the nitrogen-fixation process and is used as an inoculant during rice cultivation. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas stutzeri is a nonfluorescent denitrifying bacterium widely distributed in the environment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015740:2998500:2999374299937430005281155Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeimpB/mucB/samB family protein0640
NC_009512:5632591:5657225565722556585051281Pseudomonas putida F1, complete genomeDNA-directed DNA polymerase6e-134477
NC_016830:3869572:3877640387764038789171278Pseudomonas fluorescens F113 chromosome, complete genomeprotein UmuC8e-132469
NC_004129:2234851:2244215224421522454951281Pseudomonas fluorescens Pf-5, complete genomeultraviolet light resistance protein B, interruption-C2e-131468
NC_016830:4999946:5011546501154650128231278Pseudomonas fluorescens F113 chromosome, complete genomeprotein UmuC3e-130464
NC_004129:5373886:5421354542135454226251272Pseudomonas fluorescens Pf-5, complete genomeultraviolet light resistance protein B, interruption-C3e-127454
NC_007275:1:2175217534581284Pseudomonas syringae pv. phaseolicola 1448A small plasmid, completeRulB protein2e-126452
NC_007005:1605000:1612927161292716142071281Pseudomonas syringae pv. syringae B728a, complete genomeDNA-directed DNA polymerase4e-123441
NC_005773:866157:9245179245179255331017Pseudomonas syringae pv. phaseolicola 1448A, complete genomeRulB5e-123440
NC_009656:44500:9539895398964801083Pseudomonas aeruginosa PA7 chromosome, complete genomeultraviolet light resistance protein B2e-82306
NC_009436:2395913:2403234240323424045021269Enterobacter sp. 638, complete genomeDNA polymerase V subunit UmuC3e-82305
NC_017046:2026672:2036821203682120380891269Salmonella enterica subsp. enterica serovar Typhimurium str. 798DNA repair protein3e-81301
NC_016863:2029340:2039489203948920407571269Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1DNA polymerase V subunit UmuC3e-81301
NC_016857:2027311:2037460203746020387281269Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74DNA polymerase V subunit UmuC3e-81301
NC_016856:2085283:2091297209129720925651269Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SDNA polymerase V subunit UmuC3e-81301
NC_016810:2027311:2037460203746020387281269Salmonella enterica subsp. enterica serovar Typhimurium strDNA repair protein3e-81301
NC_016514:2476359:2487016248701624882841269Enterobacter cloacae EcWSU1 chromosome, complete genomeUmuC5e-81301
NC_015410:2351464:2380712238071223819711260Pseudomonas mendocina NK-01 chromosome, complete genomeultraviolet light resistance protein B7e-80297
NC_004631:948054:9817399817399830071269Salmonella enterica subsp. enterica serovar Typhi Ty2, completeDNA polymerase IV2e-79296
NC_016832:948029:9794149794149806821269Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-79296
NC_011283:2836000:2880660288066028817781119Klebsiella pneumoniae 342 chromosome, complete genome2e-76286
NC_009648:1541699:1596110159611015971981089Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeDNA polymerase V subunit UmuC4e-76285
NC_021066:1778000:1784007178400717852721266Raoultella ornithinolytica B6, complete genomenucleotidyltransferase/DNA polymerase involved in DNA repair5e-76284
NC_011751:1446073:1477461147746114787291269Escherichia coli UMN026 chromosome, complete genomeDNA polymerase V subunit UmuC6e-76284
NC_011601:1315746:1337755133775513390231269Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeDNA polymerase V subunit UmuC8e-76284
NC_008253:1228485:1251657125165712529251269Escherichia coli 536, complete genomeUmuC protein9e-76283
NC_009801:1296488:1321867132186713231351269Escherichia coli E24377A, complete genomeprotein UmuC8e-76283
NC_010473:1245284:1270650127065012719181269Escherichia coli str. K-12 substr. DH10B, complete genomeDNA polymerase V, subunit C8e-76283
NC_012967:1205985:1231336123133612326041269Escherichia coli B str. REL606 chromosome, complete genomeDNA polymerase V subunit UmuC8e-76283
NC_015761:1599000:1604619160461916058841266Salmonella bongori NCTC 12419, complete genomeDNA repair protein6e-75281
NC_011742:1221416:1245958124595812472261269Escherichia coli S88 chromosome, complete genomeDNA polymerase V subunit UmuC6e-75281
NC_011745:1287714:1311024131102413122861263Escherichia coli ED1a chromosome, complete genomeDNA polymerase V subunit UmuC7e-75281
NC_011283:3177350:3185304318530431865691266Klebsiella pneumoniae 342 chromosome, complete genomeDNA polymerase V subunit UmuC1e-74280
NC_004431:1443968:1468502146850214697701269Escherichia coli CFT073, complete genomeDNA polymerase IV2e-74279
NC_013850:1887556:1936856193685619381211266Klebsiella variicola At-22 chromosome, complete genomeDNA-directed DNA polymerase2e-73276
NC_021066:2197490:2204060220406022053251266Raoultella ornithinolytica B6, complete genomeDNA polymerase V subunit UmuC3e-73275
NC_009792:1739970:1746105174610517473701266Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein6e-73274
NC_015663:4735808:4743545474354547448101266Enterobacter aerogenes KCTC 2190 chromosome, complete genomeDNA polymerase V subunit UmuC1e-71270
NC_020064:1962172:1974884197488419761521269Serratia marcescens FGI94, complete genomenucleotidyltransferase/DNA polymerase involved in DNA repair5e-71268
NC_015663:4488058:4499510449951045007751266Enterobacter aerogenes KCTC 2190 chromosome, complete genomeDNA polymerase V subunit UmuC7e-71267
NC_016816:2925459:2936866293686629381281263Pantoea ananatis LMG 5342, complete genomeDNA polymerase V subunit UmuC2e-70266
NC_013282:1842412:1849918184991818511801263Cronobacter turicensis, complete genomeProtein umuC2e-69263
NC_017047:1934430:1944000194400019452651266Rahnella aquatilis HX2 chromosome, complete genomeDNA polymerase V subunit UmuC2e-69262
NC_020260:1293860:1300668130066813019301263Cronobacter sakazakii Sp291, complete genomeDNA polymerase V subunit UmuC11e-68260
NC_020418:2868000:2880167288016728811771011Morganella morganii subsp. morganii KT, complete genomeError-prone, lesion bypass DNA polymerase V (UmuC)1e-68260
NC_009778:1222273:1227942122794212291261185Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-68259
NC_010554:2646806:2725243272524327265111269Proteus mirabilis HI4320, complete genomeDNA repair protein3e-67255
NC_012668:3037345:3058519305851930596221104Vibrio cholerae MJ-1236 chromosome 1, complete sequenceerror-prone repair protein UmuC2e-65249
NC_016445:89500:8996389963911351173Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeDNA polymerase V3e-65248
NC_015424:2726223:2763991276399127652681278Aeromonas veronii B565 chromosome, complete genomeprotein UmuC2e-63243
NC_020260:1293860:1306660130666013078411182Cronobacter sakazakii Sp291, complete genomeDNA polymerase V subunit UmuC16e-63241
NC_014305:97055:1108391108391121131275Erwinia billingiae Eb661 plasmid pEB170, complete sequenceDNA polymerase V subunit6e-62238
NC_012125:4536383:4555441455544145567151275Salmonella enterica subsp. enterica serovar Paratyphi C strainDNA polymerase V subunit UmuC2e-61236
NC_016832:4425330:4444352444435244456261275Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-61236
NC_003198:4453457:4472479447247944737531275Salmonella enterica subsp. enterica serovar Typhi str. CT18,DNA polymerase IV2e-61236
NC_009436:2056000:2070165207016520714271263Enterobacter sp. 638, complete genomeDNA-directed DNA polymerase3e-61235
NC_015572:2186394:2186394218639421876951302Methylomonas methanica MC09 chromosome, complete genomeDNA-directed DNA polymerase6e-61234
NC_015566:3269469:3277699327769932789671269Serratia sp. AS12 chromosome, complete genomeDNA-directed DNA polymerase6e-61234
NC_016816:4129299:4158370415837041593981029Pantoea ananatis LMG 5342, complete genomeDNA polymerase V subunit UmuC5e-61234
NC_008570:2216736:2248997224899722502711275Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeprotein UmuC1e-60233
NC_015731:2460248:2458963245896324602551293Nitrosomonas sp. Is79A3 chromosome, complete genomeUMUC domain-containing protein DNA-repair protein4e-60231
NC_015731:2400526:2420024242002424211001077Nitrosomonas sp. Is79A3 chromosome, complete genome3e-58225
NC_016002:1741109:1748926174892617501911266Pseudogulbenkiania sp. NH8B, complete genomeDNA-directed DNA polymerase4e-58225
NC_016002:2179969:2187277218727721885421266Pseudogulbenkiania sp. NH8B, complete genomeDNA-directed DNA polymerase4e-58225
NC_008341:29038:4657946579478741296Nitrosomonas eutropha C91 plasmid1, complete sequenceDNA-directed DNA polymerase7e-57221
NC_008570:1143578:1164200116420011654591260Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeprotein UmuC8e-57221
NC_015424:3520783:3553264355326435545231260Aeromonas veronii B565 chromosome, complete genomeprotein UmuC2e-56219
NC_014532:3596097:3628379362837936296561278Halomonas elongata DSM 2581, complete genomeDNA-directed DNA polymerase2e-56219
NC_015222:2475792:2495405249540524967001296Nitrosomonas sp. AL212 chromosome, complete genomeDNA-directed DNA polymerase6e-56218
NC_014842:19411:4458444584458581275Pantoea sp. At-9b plasmid pPAT9B05, complete sequenceDNA-directed DNA polymerase2e-55216
NC_007626:2204767:2245935224593522472121278Magnetospirillum magneticum AMB-1, complete genomeNucleotidyltransferase/DNA polymerase involved in DNA repair2e-54213
NC_006347:2190000:2190977219097721922601284Bacteroides fragilis YCH46, complete genomeSOS mutagenesis and repair protein UmuC homolog3e-54212
NC_016776:2237404:2239666223966622409491284Bacteroides fragilis 638R, complete genomeputative RumB/ImpB like DNA repair protein4e-54212
NC_003228:2245181:2248666224866622499491284Bacteroides fragilis NCTC 9343, complete genomeputative RumB/ImpB like DNA repair protein1e-53210
NC_008757:151862:1550911550911562391149Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completeUMUC domain protein DNA-repair protein4e-53208
NC_011761:1499500:1513748151374815150311284Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeumuC protein1e-52207
NC_014394:2577949:2587767258776725890411275Gallionella capsiferriformans ES-2 chromosome, complete genomeDNA-directed DNA polymerase9e-53207
NC_007963:1552761:1564357156435715656371281Chromohalobacter salexigens DSM 3043, complete genomeDNA-directed DNA polymerase8e-53207
NC_008255:1701195:1719517171951717207791263Cytophaga hutchinsonii ATCC 33406, complete genomenucleotidyltransferase/DNA polymerase involved in DNA repair1e-52206
NC_015703:4483500:4516981451698145182491269Runella slithyformis DSM 19594 chromosome, complete genomeDNA-directed DNA polymerase1e-51203
NC_006677:2575345:2579904257990425811661263Gluconobacter oxydans 621H, complete genomeSOS (error prone) mutagenesis protein UmuC7e-51201
NC_010943:3069082:3084429308442930857181290Stenotrophomonas maltophilia K279a, complete genomeputative UV protection and mutation protein4e-50198
NC_014910:1912552:1919375191937519206611287Alicycliphilus denitrificans BC chromosome, complete genomeDNA-directed DNA polymerase1e-49197
NC_020541:1786500:1806286180628618075751290Rhodanobacter sp. 2APBS1, complete genomenucleotidyltransferase/DNA polymerase involved in DNA repair3e-49196
NC_012660:3689223:370123337012333701637405Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein4e-48192
NC_014733:1223359:1230133123013312314251293Methylovorus sp. MP688 chromosome, complete genomeDNA-directed DNA polymerase1e-47190
NC_003902:3514000:3524399352439935256851287Xanthomonas campestris pv. campestris str. ATCC 33913, completepolymerase V subunit2e-46186
NC_007604:1586243:1606746160674616080021257Synechococcus elongatus PCC 7942, complete genomeDNA-directed DNA polymerase2e-45183
NC_015970:19850:2427124271255301260Rhodothermus marinus SG0.5JP17-172 plasmid pRHOM17201, completeDNA-directed DNA polymerase1e-45183
NC_006576:2683467:7716771689721257Synechococcus elongatus PCC 6301, complete genomeDNA polymerase V5e-45181
NC_014733:1073540:1081149108114910824411293Methylovorus sp. MP688 chromosome, complete genomeDNA-directed DNA polymerase1e-44180
NC_009927:253250:2550982550982563631266Acaryochloris marina MBIC11017 plasmid pREB2, complete sequenceDNA polymerase V, putative2e-44179
NC_012969:1574330:1589660158966015909521293Methylovorus glucosetrophus SIP3-4 chromosome, complete genomeDNA-directed DNA polymerase3e-44179
NC_011757:276953:2927672927672940981332Methylobacterium chloromethanicum CM4, complete genomeDNA-directed DNA polymerase3e-44179
NC_010725:356609:3586503586503598911242Methylobacterium populi BJ001, complete genome5e-43175
NC_014733:1573171:1588662158866215899541293Methylovorus sp. MP688 chromosome, complete genomeDNA-directed DNA polymerase4e-42172
NC_004459:349500:3706513706513719071257Vibrio vulnificus CMCP6 chromosome I, complete sequenceNucleotidyltransferase/DNA polymerase involved in DNA repair3e-42172
NC_012988:4262631:4265341426534142666721332Methylobacterium extorquens DM4, complete genomeDNA polymerase V subunit C3e-42172
NC_010725:1419272:1469060146906014702381179Methylobacterium populi BJ001, complete genome3e-42172
NC_008321:3815940:3837529383752938387851257Shewanella sp. MR-4, complete genomeDNA-directed DNA polymerase5e-42171
NC_010172:3894652:3897842389784238992781437Methylobacterium extorquens PA1, complete genomeDNA-directed DNA polymerase9e-42171
NC_010334:2615260:2641539264153926427921254Shewanella halifaxensis HAW-EB4, complete genomeDNA-directed DNA polymerase5e-41168
NC_010510:534024:5400675400675413951329Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeDNA-directed DNA polymerase1e-40167
NC_015167:1154497:1154497115449711557531257Cellulophaga lytica DSM 7489 chromosome, complete genomeDNA-directed DNA polymerase2e-40166
NC_010334:2615260:2621348262134826226011254Shewanella halifaxensis HAW-EB4, complete genomeDNA-directed DNA polymerase2e-40166
NC_020054:4983691:4993524499352449948101287Fibrella aestuarina BUZ 2 drat genomeDNA polymerase V1e-39164
NC_011894:7109374:7118741711874171200691329Methylobacterium nodulans ORS 2060, complete genomeUMUC domain protein DNA-repair protein2e-39163
NC_007516:1086948:1105898110589811071721275Synechococcus sp. CC9605, complete genomeDNA-directed DNA polymerase3e-39162
NC_009052:4168776:4175354417535441766101257Shewanella baltica OS155, complete genomeDNA-directed DNA polymerase3e-39162
NC_005071:671084:6898236898236910971275Prochlorococcus marinus str. MIT 9313, complete genomeputative UmuC protein2e-38160
NC_004349:3938:1007810078113341257Shewanella oneidensis MR-1 plasmid pMR-1, complete sequenceSOS mutagenesis protein RulB1e-37157
NC_009453:36599:5178151781530791299Arthrobacter sp. Rue61a plasmid pAL1, complete sequenceputative UmuC-like protein9e-37154
NC_011881:1:4351435156311281Arthrobacter chlorophenolicus A6 plasmid pACHL02, completeDNA-directed DNA polymerase3e-36152
NC_016609:8251438:8251438825143882527211284Niastella koreensis GR20-10 chromosome, complete genomeDNA-directed DNA polymerase1e-35150
NC_017986:4790482:482496648249664825310345Pseudomonas putida ND6 chromosome, complete genomeDNA-directed DNA polymerase1e-35150
NC_009997:5188221:5208740520874052099961257Shewanella baltica OS195, complete genomeDNA-directed DNA polymerase2e-32139
NC_009665:5072413:5091613509161350928691257Shewanella baltica OS185 chromosome, complete genomeDNA-directed DNA polymerase2e-32139
NC_016901:5130147:5149362514936251506181257Shewanella baltica OS678 chromosome, complete genomeDNA-directed DNA polymerase2e-32139
NC_007005:1705406:172438317243831724826444Pseudomonas syringae pv. syringae B728a, complete genome2e-30133
NC_008573:195317:233152233152233817666Shewanella sp. ANA-3 plasmid 1, complete sequenceumuC protein2e-28127
NC_016901:2661971:266591426659142666699786Shewanella baltica OS678 chromosome, complete genome3e-28126
NC_009997:2699644:270601227060122706782771Shewanella baltica OS195, complete genomeDNA-directed DNA polymerase4e-28125
NC_010322:5349000:536594753659475366450504Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein1e-27124
NC_020209:4312892:432400843240084324301294Pseudomonas poae RE*1-1-14, complete genomeDNA-directed DNA polymerase9e-24111
NC_020181:929000:948863948863949180318Enterobacter aerogenes EA1509E, complete genomeError-prone, lesion bypass DNA polymerase V (UmuC)9e-23107
NC_012988:4292815:4339620433962043408161197Methylobacterium extorquens DM4, complete genomeDNA-directed DNA polymerase2e-20100
NC_011138:3182807:318797031879703188671702Alteromonas macleodii 'Deep ecotype', complete genomeumuC protein2e-2099.8
NC_008789:1393526:141157114115711412098528Halorhodospira halophila SL1, complete genomehypothetical protein2e-1790.1
NC_012968:2000218:201294120129412013399459Methylotenera mobilis JLW8, complete genome1e-1687.8
NC_020181:929000:948562948562948891330Enterobacter aerogenes EA1509E, complete genomeError-prone, lesion bypass DNA polymerase V (UmuC)2e-1687
NC_010488:48868:660686606866457390Escherichia coli SMS-3-5 plasmid pSMS35_130, complete sequence2e-1686.7
NC_009837:155284:157431157431157778348Escherichia coli APEC O1 plasmid pAPEC-O1-ColBM, complete sequencehypothetical protein5e-1479
NC_012988:1777618:179044317904431790928486Methylobacterium extorquens DM4, complete genomehypothetical protein9e-1478.2
NC_014628:252500:2678282678282690661239Paenibacillus polymyxa SC2 plasmid pSC2, complete sequenceDNA polymerase IV 25e-1168.9
NC_008054:245184:2477802477802490871308Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeUmuC-like DNA-repair protein3e-1066.2
NC_012673:785718:7857187857187870131296Exiguobacterium sp. AT1b, complete genomeDNA-directed DNA polymerase1e-0964.7
NC_015687:303810:3246003246003257901191Clostridium acetobutylicum DSM 1731 chromosome, complete genomeDNA-damage repair protein, dinP/uvrX2e-0963.5
NC_003030:303812:3246033246033257931191Clostridium acetobutylicum ATCC 824, complete genomeDNA-damage repair protein, dinP/uvrX ortholog2e-0963.5
NC_012918:2896671:2914646291464629158751230Geobacter sp. M21 chromosome, complete genomeDNA-directed DNA polymerase4e-0962.8
NC_009832:4482500:450469545046954505105411Serratia proteamaculans 568, complete genomeUV protection protein9e-0961.2
NC_017191:1173989:1189211118921111904611251Bacillus amyloliquefaciens XH7 chromosome, complete genomelesion bypass phage DNA polymerase2e-0860.5
NC_017188:1172181:1187634118763411888841251Bacillus amyloliquefaciens TA208 chromosome, complete genomelesion bypass phage DNA polymerase2e-0860.5
NC_011146:1998981:2024621202462120258501230Geobacter bemidjiensis Bem, complete genomeUMUC domain protein DNA-repair protein3e-0859.7
NC_011894:6888562:691837069183706918834465Methylobacterium nodulans ORS 2060, complete genomehypothetical protein1e-0757.8
NC_005773:2177184:219544421954442195803360Pseudomonas syringae pv. phaseolicola 1448A, complete genomeRulB domain protein2e-0757
NC_014551:1872000:1887797188779718890471251Bacillus amyloliquefaciens DSM 7, complete genomelesion bypass phage DNA polymerase2e-0756.6
NC_014550:2355500:2365016236501623661821167Arthrobacter arilaitensis Re117, complete genomeputative DNA polymerase IV4e-0755.8
UCMB5137:2054735:2080025208002520811131089Bacillus atrophaeus UCMB-5137lesion bypass phage DNA polymerase5e-0755.8
NC_014393:3425694:3442356344235634434171062Clostridium cellulovorans 743B chromosome, complete genomeDNA-directed DNA polymerase5e-0755.5
NC_002939:47406:5200052000532411242Geobacter sulfurreducens PCA, complete genomeImpB/MucB/SamB family protein6e-0755.1
NC_009328:2161116:2199127219912722003801254Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeImpB/MucB/SamB family DNA-damage repair protein2e-0653.9
NC_011761:2344408:2358296235829623594321137Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeDNA polymerase IV4e-0652.8
NC_011206:2239109:2252997225299722541331137Acidithiobacillus ferrooxidans ATCC 53993, complete genomeDNA-directed DNA polymerase4e-0652.8
NC_018704:896209:8992168992169004451230Amphibacillus xylanus NBRC 15112, complete genomeputative UmuC-like protein9e-0651.6